Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER95591
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:78725502:78728272:-1 gene:SORBI_3001G522300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACGCGCCGCTCCCAGGCCACGCCTGCCGCTTCGGCGGCGGTTCTTCTGGCCGCGCTG
CTGCTGCTGCATTGCCAGTGCCAACTTGCCGGCGCGGCGACGGACGCGGAGCGGCGGGCG
CTGCTGGACTTCAAGGCGGCGGTGACGGCGGACCCGGGGAGCGTGCTGGAGTCGTGGACG
CCCACGGGGGACCCCTGCGACTTCGTCGGGGTGACCTGCGACGCGGGCGCCGTGACGCGG
CTGCGCATCCACGGCGCGGGGCTGGCGGGCACGCTCACGCCCTCCCTGGCGCGCCTCCCC
GCGCTCGAGTCCGTCTCGCTCTTCGGCAACGCACTCACGGGCGGCGTCCCCTCCAGCTTC
CGCGCGCTCGCGCCCACGCTCCACAAGCTCAACCTCAGCCGGAACGCGCTCGACGGCGAG
ATCCCGCCCTTCCTCGGCGCCTTCCCGTGGCTCCGCCTGCTCGACCTCTCCTACAACCGC
TTCGCCGGCGGGATCCCCGCCGCGCTCTTCGACACCTGCCTCCGCCTCCGCTACGTCTCG
CTCGCGCACAACGACCTCACGGGCCCCGTCCCGCCCGGCATTGCCAACTGCTCGCGCCTC
GCCGGCTTCGACTTCTCCTACAACCGCCTCTCTGGCGAGTTCCCCGACCGGGTCTGCGCT
CCGCCGGAGATGAACTACATCTCCGTCCGGAGCAACGCGCTCTCCGGGGACATAGCCGGC
AAGCTCACCTCCTGCGGCCGCATTGACCTCTTGGACGTCGGCAGCAACAACTTCTCCGGA
GCCGCGCCCTTTGCACTCCTCGGCTCGGTAAACATCACCTACTTCAATGTCTCCTCCAAC
GCCTTTGACGGCGAAATCCCCAGCATTGCAACATGCGGCACTAAGTTCTCATACTTGGAC
GCGTCCGGCAACCGGCTCACGGGGCCGGTGCCGGAGAGCGTGGTGAATTGCCGCGGCCTG
AGGGTTTTGGATTTGGGGGCGAATGCTCTTGCTGGAGCTGTACCGCCTGTGATTGGGACA
CTGCGGTCGCTCTCCGTTCTCCGGCTCGCGGGCAATCCTGGCATTTCCGGTCCGATTCCA
GCTGAGTTCGGGGGAATTGAGATGCTTGTCACACTCGACCTCGCGGGCCTGGCTCTTACA
GGAGAGATTCCAGGATCCCTCAGCCAGTGCCAATTCTTGCTTGAACTGAACCTGTCTGGC
AACAAACTGCAAGGAGCTATCCCAGGCACACTCAACAACTTAACCTACCTCAAGATGCTT
GATCTCCACAGGAACCAGCTTGATGGGGGCATTCCCGTCACACTTGGGCAGCTCACAAAC
CTTGATCTCCTAGACCTCTCGGAGAATCAACTGACTGGGCCAATCCCTCCAGAGCTTGGG
AACCTCTCTAACCTGACACATTTCAACGTGTCCTTCAATAACCTATCTGGCATGATCCCT
TCTGAGCCAGTCTTGCAGAAATTTGATTACACTGCATACATGGGTAACCAGTTACTATGT
GGCTCTCCATTGCCCAATAACTGTGGGACTGGGATGAAGCACCGCAGACGATTGGGTGTG
CCTGTCATAATCGCCATTGTTGCCGCAGCCCTCATACTTATTGGAATATGCATTGTTTGT
GCGTTAAACATCAAGGCTTATACACGTAAGAGTACAGATGAGGACAGTAAGGAAGAGGAA
GAGGTTCTTGTGTCTGAGAGCACCCCCCCAATTGCATCTCCAGGCTCAAATGCCATCATC
GGAAAATTGGTGCTTTTCAGCAAGAGCTTGCCTTCAAGGTATGAAGACTGGGAAACTGGA
ACTAAGGCGCTACTTGATAAGGACTGTCTCATTGGTGGTGGATCAATTGGTACGGTGTAC
AAGGCCACTTTTGAAAACGGCCTATCCATTGCTGTGAAGAAACTGGAGACACTAGGGAGG
GTGAGAGGCCAGGATGAGTTTGAGCAAGAGATGAGCCAGCTTGGTAACCTCAGCCGCCCC
AATCTGGTTGCTTTTCAGGGTTACTACTGGTCATCCTCGATGCAGTTGCTTCTCTCGGAA
TATATGACCAATGGGAGCTTGTATGACCACCTCCATGGTAACCGTCCTCATGCTTTCTCT
GAGAGCAGCAGCAGAGGTACTGGAGGTGAACTGTTTTGGGAGCGGAGGTTCAACATTGCA
CTTGGAGCGGCCCGTGCACTTGCTTACCTTCACCATGATTGCCGGCCACAGATCCTGCAT
CTCAACATAAAGTCCTCCAACATTATGTTAGATGGGAAATACGAAGCTAAGCTATCTGAT
TATGGATTGGGGAAGCTGTTGCCAATACTAGGAAGCATTGAATTGAGTAGAATTCACACT
GCAATTGGGTACATTGCACCGGAGCTGGCATCTCCGACTATGAGATATAGCGAGAAGAGT
GATGTATTTAGCTTTGGGGTGGTTTTGCTTGAGATCGTGACAGGGCGGAAACCTGTGGAC
AGCCCTGGGGTGGCTACAGCTGTGGTTCTCCGTGATTATGTAAGAGAGATATTGGAGGAT
GGAACTGCATCGGACTGCTTTGATCGAAGCCTGAGGGGATTTGTTGAAGCTGAATTGGTT
CAAGTACTCAAATTGGGTCTGGTATGCACTTCCAATACACCGTCAAGCCGACCTAGCATG
GCAGAAGTGGTACAGTTCTTGGAGTCCGTTAGAATTAGCTCTTGA

Peptide Sequence

PEP ID

EER95591
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:78725502:78728272:-1 gene:SORBI_3001G522300 transcript:EER95591 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTRRSQATPAASAAVLLAALLLLHCQCQLAGAATDAERRALLDFKAAVTADPGSVLESWT
PTGDPCDFVGVTCDAGAVTRLRIHGAGLAGTLTPSLARLPALESVSLFGNALTGGVPSSF
RALAPTLHKLNLSRNALDGEIPPFLGAFPWLRLLDLSYNRFAGGIPAALFDTCLRLRYVS
LAHNDLTGPVPPGIANCSRLAGFDFSYNRLSGEFPDRVCAPPEMNYISVRSNALSGDIAG
KLTSCGRIDLLDVGSNNFSGAAPFALLGSVNITYFNVSSNAFDGEIPSIATCGTKFSYLD
ASGNRLTGPVPESVVNCRGLRVLDLGANALAGAVPPVIGTLRSLSVLRLAGNPGISGPIP
AEFGGIEMLVTLDLAGLALTGEIPGSLSQCQFLLELNLSGNKLQGAIPGTLNNLTYLKML
DLHRNQLDGGIPVTLGQLTNLDLLDLSENQLTGPIPPELGNLSNLTHFNVSFNNLSGMIP
SEPVLQKFDYTAYMGNQLLCGSPLPNNCGTGMKHRRRLGVPVIIAIVAAALILIGICIVC
ALNIKAYTRKSTDEDSKEEEEVLVSESTPPIASPGSNAIIGKLVLFSKSLPSRYEDWETG
TKALLDKDCLIGGGSIGTVYKATFENGLSIAVKKLETLGRVRGQDEFEQEMSQLGNLSRP
NLVAFQGYYWSSSMQLLLSEYMTNGSLYDHLHGNRPHAFSESSSRGTGGELFWERRFNIA
LGAARALAYLHHDCRPQILHLNIKSSNIMLDGKYEAKLSDYGLGKLLPILGSIELSRIHT
AIGYIAPELASPTMRYSEKSDVFSFGVVLLEIVTGRKPVDSPGVATAVVLRDYVREILED
GTASDCFDRSLRGFVEAELVQVLKLGLVCTSNTPSSRPSMAEVVQFLESVRISS

Transcript Sequence

Transcript ID

EER95591
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:78725502:78728272:-1 gene:SORBI_3001G522300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACGCGCCGCTCCCAGGCCACGCCTGCCGCTTCGGCGGCGGTTCTTCTGGCCGCGCTG
CTGCTGCTGCATTGCCAGTGCCAACTTGCCGGCGCGGCGACGGACGCGGAGCGGCGGGCG
CTGCTGGACTTCAAGGCGGCGGTGACGGCGGACCCGGGGAGCGTGCTGGAGTCGTGGACG
CCCACGGGGGACCCCTGCGACTTCGTCGGGGTGACCTGCGACGCGGGCGCCGTGACGCGG
CTGCGCATCCACGGCGCGGGGCTGGCGGGCACGCTCACGCCCTCCCTGGCGCGCCTCCCC
GCGCTCGAGTCCGTCTCGCTCTTCGGCAACGCACTCACGGGCGGCGTCCCCTCCAGCTTC
CGCGCGCTCGCGCCCACGCTCCACAAGCTCAACCTCAGCCGGAACGCGCTCGACGGCGAG
ATCCCGCCCTTCCTCGGCGCCTTCCCGTGGCTCCGCCTGCTCGACCTCTCCTACAACCGC
TTCGCCGGCGGGATCCCCGCCGCGCTCTTCGACACCTGCCTCCGCCTCCGCTACGTCTCG
CTCGCGCACAACGACCTCACGGGCCCCGTCCCGCCCGGCATTGCCAACTGCTCGCGCCTC
GCCGGCTTCGACTTCTCCTACAACCGCCTCTCTGGCGAGTTCCCCGACCGGGTCTGCGCT
CCGCCGGAGATGAACTACATCTCCGTCCGGAGCAACGCGCTCTCCGGGGACATAGCCGGC
AAGCTCACCTCCTGCGGCCGCATTGACCTCTTGGACGTCGGCAGCAACAACTTCTCCGGA
GCCGCGCCCTTTGCACTCCTCGGCTCGGTAAACATCACCTACTTCAATGTCTCCTCCAAC
GCCTTTGACGGCGAAATCCCCAGCATTGCAACATGCGGCACTAAGTTCTCATACTTGGAC
GCGTCCGGCAACCGGCTCACGGGGCCGGTGCCGGAGAGCGTGGTGAATTGCCGCGGCCTG
AGGGTTTTGGATTTGGGGGCGAATGCTCTTGCTGGAGCTGTACCGCCTGTGATTGGGACA
CTGCGGTCGCTCTCCGTTCTCCGGCTCGCGGGCAATCCTGGCATTTCCGGTCCGATTCCA
GCTGAGTTCGGGGGAATTGAGATGCTTGTCACACTCGACCTCGCGGGCCTGGCTCTTACA
GGAGAGATTCCAGGATCCCTCAGCCAGTGCCAATTCTTGCTTGAACTGAACCTGTCTGGC
AACAAACTGCAAGGAGCTATCCCAGGCACACTCAACAACTTAACCTACCTCAAGATGCTT
GATCTCCACAGGAACCAGCTTGATGGGGGCATTCCCGTCACACTTGGGCAGCTCACAAAC
CTTGATCTCCTAGACCTCTCGGAGAATCAACTGACTGGGCCAATCCCTCCAGAGCTTGGG
AACCTCTCTAACCTGACACATTTCAACGTGTCCTTCAATAACCTATCTGGCATGATCCCT
TCTGAGCCAGTCTTGCAGAAATTTGATTACACTGCATACATGGGTAACCAGTTACTATGT
GGCTCTCCATTGCCCAATAACTGTGGGACTGGGATGAAGCACCGCAGACGATTGGGTGTG
CCTGTCATAATCGCCATTGTTGCCGCAGCCCTCATACTTATTGGAATATGCATTGTTTGT
GCGTTAAACATCAAGGCTTATACACGTAAGAGTACAGATGAGGACAGTAAGGAAGAGGAA
GAGGTTCTTGTGTCTGAGAGCACCCCCCCAATTGCATCTCCAGGCTCAAATGCCATCATC
GGAAAATTGGTGCTTTTCAGCAAGAGCTTGCCTTCAAGGTATGAAGACTGGGAAACTGGA
ACTAAGGCGCTACTTGATAAGGACTGTCTCATTGGTGGTGGATCAATTGGTACGGTGTAC
AAGGCCACTTTTGAAAACGGCCTATCCATTGCTGTGAAGAAACTGGAGACACTAGGGAGG
GTGAGAGGCCAGGATGAGTTTGAGCAAGAGATGAGCCAGCTTGGTAACCTCAGCCGCCCC
AATCTGGTTGCTTTTCAGGGTTACTACTGGTCATCCTCGATGCAGTTGCTTCTCTCGGAA
TATATGACCAATGGGAGCTTGTATGACCACCTCCATGGTAACCGTCCTCATGCTTTCTCT
GAGAGCAGCAGCAGAGGTACTGGAGGTGAACTGTTTTGGGAGCGGAGGTTCAACATTGCA
CTTGGAGCGGCCCGTGCACTTGCTTACCTTCACCATGATTGCCGGCCACAGATCCTGCAT
CTCAACATAAAGTCCTCCAACATTATGTTAGATGGGAAATACGAAGCTAAGCTATCTGAT
TATGGATTGGGGAAGCTGTTGCCAATACTAGGAAGCATTGAATTGAGTAGAATTCACACT
GCAATTGGGTACATTGCACCGGAGCTGGCATCTCCGACTATGAGATATAGCGAGAAGAGT
GATGTATTTAGCTTTGGGGTGGTTTTGCTTGAGATCGTGACAGGGCGGAAACCTGTGGAC
AGCCCTGGGGTGGCTACAGCTGTGGTTCTCCGTGATTATGTAAGAGAGATATTGGAGGAT
GGAACTGCATCGGACTGCTTTGATCGAAGCCTGAGGGGATTTGTTGAAGCTGAATTGGTT
CAAGTACTCAAATTGGGTCTGGTATGCACTTCCAATACACCGTCAAGCCGACCTAGCATG
GCAGAAGTGGTACAGTTCTTGGAGTCCGTTAGAATTAGCTCTTGA