Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER95589
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:78708589:78712511:-1 gene:SORBI_3001G522000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGATGAACTACGCTCTACGTCTGTGGTCCAGAAGGTCCATGGGCAGTCTGTGTTG
TTGAGCAGAATCTCTTCCTACTCTGCCATGAACAACCCCGTATTCAACAATGCCTATTCT
GCTTACAATGTGCCCCAGAGGTCATATTATGGGATGAATGCAACTGTTGGACTCTCATCT
GTCATGGCACCATCTCCTGTCTTCGCGTCTGCCCCAAAAGAGAAAGGCTTTTCTGGATTT
ATGATTGACTTTATGATGGGTGGGGTTTCCGCTGCTGTCTCCAAGACAGCTGCTGCTCCG
ATTGAGCGTGTCAAGCTTTTGATTCAGAACCAGGATGAAATGCTCAAGACTGGCAGGCTT
TCTGAACCCTACAAGGGTATTGGGGACTGCTTTGGTCGGACAATCAGAGATGAGGGTTTT
GTCTCACTGTGGAGAGGAAACACAGCTAATGTAATCCGTTACTTCCCCACACAGGCATTG
AACTTTGCGTTCAAGGATCACTTCAAGCGCATGTTCAACTTTAAGAAGGACAAGGATGGG
TACTGGAAGTGGTTTGCTGGAAATCTGGCTTCTGGAGGAGCTGCTGGTGCTTGCTCTCTA
TTCTTTGTCTATTCTCTGGACTACGCTCGTACACGTTTGGCCAATGATGCCAAGGCTGCA
AAGAAGGGTGGTGAGAGGCAGTTCAATGGACTTGTTGATGTTTACCGCAAGACCCTTGCC
AGTGATGGTATTCGCGGCCTCTACCGTGGATTCAATATCTCTTGTGTGGGAATCATTGTG
TACCGAGGTCTTTACTTTGGTATGTATGACTCCCTGAAGCCAGTGCTTCTTGTTGGTACC
CTGCAGGACAACTTCTTAGCCAGCTTCTTGCTCGGCTGGGGTATAACCATTGGTGCTGGC
CTTGCCTCTTACCCCATTGATACTGTTCGCCGTCGCATGATGATGACATCTGGTGAGGCC
GTCAAGTACAACAGCTCCTTGGATGCTTTCAAGCAGATTGTTGCAAAGGAGGGTACCAAG
TCCCTCTTCAAGGGTGCTGGGGCAAACATCCTCCGTGCTGTTGCTGGTGCTGGTGTCCTT
GCTGGGTACGACAAGCTCCAGGTGATCGTCTTCGGCAAGAAGTATGGGTCTGGTGGCGGC
TAA

Peptide Sequence

PEP ID

EER95589
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:78708589:78712511:-1 gene:SORBI_3001G522000 transcript:EER95589 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MADELRSTSVVQKVHGQSVLLSRISSYSAMNNPVFNNAYSAYNVPQRSYYGMNATVGLSS
VMAPSPVFASAPKEKGFSGFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRL
SEPYKGIGDCFGRTIRDEGFVSLWRGNTANVIRYFPTQALNFAFKDHFKRMFNFKKDKDG
YWKWFAGNLASGGAAGACSLFFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLA
SDGIRGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLVGTLQDNFLASFLLGWGITIGAG
LASYPIDTVRRRMMMTSGEAVKYNSSLDAFKQIVAKEGTKSLFKGAGANILRAVAGAGVL
AGYDKLQVIVFGKKYGSGGG

Transcript Sequence

Transcript ID

EER95589
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:78708589:78712511:-1 gene:SORBI_3001G522000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAACCCCAGGGTCTTTTATACCGTGCCTCATCTCGTTCGTCTCGTCTCAGGTCTCAGCG
ACCCTACGAGAGCCCCCGTCCCAACTCCACCACCTCGCCTCTCCGCGGCGCGAGCGAGGG
CGACGCCGGCCGCGACGGGGTTCCGCCCGACCGCGGCGTCGGCGGGAACCCGGGCTTCGC
TCCATCTCCTCACTCTCTTCATCTCTTCGGTACGCACTCTCTCTCTCCCCCAAGCCGCTC
CGGCCTGGTTCGTGAAATTGCGAGGGGGTCAGTCGTGATCTAATTTCGTTTTTGAGATGG
GTGCATAGCGTTTTTCGGTAGATCTGGCTACATGGGAAGTTTACCTGAGGAATTGAACTT
GTCGGTTGTACAGAGGACCGTAGATCTGGATGGATGAAGTGATTTTAATTTCCAGTTCCC
TAGTCCTGTAGTAGGGACGCATATGCACGGCCTCCTGGTACGATGTTTTGCCTGCTTCTG
TTATTTTCGCGTGTAGGTTTACCTCTAATCGGTACCATGTTTTATTTAGGGTTTAGGGTT
TAGTTTATGGTAACTAGAACTGAAACTGCTGTCTGTGCGAGCTAGTCGTTTCTGTCAACA
TCAGGAGGCAGCTAGTCTAGTGCTGTCGACTCCAATATCTACACGAAGAGCTACTATTCT
TTACTTGGTTTTGAGGACCAGTCCTTTGCTGTTTAGCAATGTAAACTCAGAGCTGCACTT
CAAATATCACTCTTGTTTAAAAGTTTGCCTGTTTAACTGCTTAGGGTCACAGGGTCCTTG
CGATAATGGGCTGGGTAGACAACTTGCTGTGAAGTACAACTTTTGTGAAACTTTGGGTGT
TTCTTTTTGCTCTTACATGAATGTATTACGTACACTAGAGGTGTTATTAATACACATAAC
TTTGAACCATACTTGGTTTGTGTCACCAAGCAGCATTAGGCAATTAGAATTAGAATTGAG
AGTCAATAGTTTGCAATTTGCGTTGCTTATTTTCCTGGATAGGCATCAACTGTTGGACTG
TGCTGCTCACTGCTGGTTGGTTCCTTGGTGTTTCGCATATTGTTTGTCAATACGTTTTGA
TATTGTTGATGCTTGCATGCAAATGCTGTTTTTGTTTTTCTCTTGTTTGCCACTCCATAG
CTGCATGTTCAGTCTATATTGGATAAAAAAGTTGGGTCTCAGGAGCGGGTTTTGTTCCAT
TTGTGTATGTCTTAACTCTTAAATTGGTCTCAAGAGATGGTTTTGTTGTGTCTGTGTTAT
GTCTCTTACTAGTTTTATGTATTAATATGTTATTAATGTAATATAATGTTTGGTCTTAGT
GCCTGATGTGCTGGTTTGACAGTAGTTTTGTATGTACAGATCCATTGATGAGTAGCACTC
TGTTTGACAGTAGTGCTTATATATGCTACTGTGCTATGTTTGTTATACTGAGACGGACTT
GCTCACTACAATCTAGCTTAATTGGGTGTTGATATCTATGTTTGACACTTCTTCCTGGAC
AATACCAGAGCTCTATGTTCCGCACTCCTAGACGAGATCAGAGTGATTTCAAAATGACGC
TTGTAGTTTCCCTGCTTTTCATCACGTTGTAAATGCTAGGTTTCAAGATTTGCCAGGCTG
ATTTTGAATCAAGCAAATAATGCTAGGTCTCAGAGTTTTACATTAGACTAGATTAGTAGA
TACAGATTGCCAAAGCTTCTTGTCATTTAGATGTATTTTTTAGTGATTAATTAAATGTGT
CTTTTTAATCATGTTATAAGCATCTTGATGCACCAGGATATGCTGTTATTTTTACATGCG
GTTAACGGCTCATACTCCTTTTATGGTACCCTGAGTGAACTTTCTGTTCCACTTAGTTTG
GGAAAAAATGATCTAGGTGCAACTCCTTTACGTGCTTTTACGTTTTGTAGGAGTATCCAT
GTAGACACTTTGGCTATCTATATCTGTGCTCCATATGTATGGTGTCTTTGCTTATAATCT
GACCCAAACGTCTCATGTTGATTGACAGATCGCTTTTGACCTGTGAAAATGGCGGATGAA
CTACGCTCTACGTCTGTGGTCCAGAAGGTCCATGGGCAGTCTGTGTTGTTGAGCAGAATC
TCTTCCTACTCTGCCATGAACAACCCCGTATTCAACAATGCCTATTCTGCTTACAATGTG
CCCCAGAGGTCATATTATGGGATGAATGCAACTGTTGGACTCTCATCTGTCATGGCACCA
TCTCCTGTCTTCGCGTCTGCCCCAAAAGAGAAAGGCTTTTCTGGATTTATGATTGACTTT
ATGATGGGTGGGGTTTCCGCTGCTGTCTCCAAGACAGCTGCTGCTCCGATTGAGCGTGTC
AAGCTTTTGATTCAGAACCAGGATGAAATGCTCAAGACTGGCAGGCTTTCTGAACCCTAC
AAGGGTATTGGGGACTGCTTTGGTCGGACAATCAGAGATGAGGGTTTTGTCTCACTGTGG
AGAGGAAACACAGCTAATGTAATCCGTTACTTCCCCACACAGGCATTGAACTTTGCGTTC
AAGGATCACTTCAAGCGCATGTTCAACTTTAAGAAGGACAAGGATGGGTACTGGAAGTGG
TTTGCTGGAAATCTGGCTTCTGGAGGAGCTGCTGGTGCTTGCTCTCTATTCTTTGTCTAT
TCTCTGGACTACGCTCGTACACGTTTGGCCAATGATGCCAAGGCTGCAAAGAAGGGTGGT
GAGAGGCAGTTCAATGGACTTGTTGATGTTTACCGCAAGACCCTTGCCAGTGATGGTATT
CGCGGCCTCTACCGTGGATTCAATATCTCTTGTGTGGGAATCATTGTGTACCGAGGTCTT
TACTTTGGTATGTATGACTCCCTGAAGCCAGTGCTTCTTGTTGGTACCCTGCAGGACAAC
TTCTTAGCCAGCTTCTTGCTCGGCTGGGGTATAACCATTGGTGCTGGCCTTGCCTCTTAC
CCCATTGATACTGTTCGCCGTCGCATGATGATGACATCTGGTGAGGCCGTCAAGTACAAC
AGCTCCTTGGATGCTTTCAAGCAGATTGTTGCAAAGGAGGGTACCAAGTCCCTCTTCAAG
GGTGCTGGGGCAAACATCCTCCGTGCTGTTGCTGGTGCTGGTGTCCTTGCTGGGTACGAC
AAGCTCCAGGTGATCGTCTTCGGCAAGAAGTATGGGTCTGGTGGCGGCTAAGGATATATT
ATGATGACGATGACGAACAACAAACATGATGTTTTAGGTGCCTTTAATAACATACGTATG
GACCCTGGACACCAATTTTAAGTTTAGCTCTCGCAGAGGTTGGTGAGTTGTTTGTAGTGT
GGCTGTGACCGCATCCCTTTTTGCGTCGGAGATTGGAAATAAGTGACGTTAGAAATCCTG
GCAGATGTTTTGGGGTAGACGATTTGGCTGCATCAGTTTTTTATTTGGTTTTGCGCATGC
AAAGGGTTGCTCGAATGTTATCTATGTTGGTTTCGGAATCACAGCTTACTGTGTTTGGTG
AGCGTATGTTTTGTGATCTTTTGCTGCAATGGTTTATCGCTTCAAGCTAGCGCTACATGA
ACGATGAACCCCATGGTCTCAAGGATCATCGCTTCAGGGAGGCAGGCATATCCCTC