Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER95414
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:75733314:75737649:-1 gene:SORBI_3001G487100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGCCGTATCACCAGCCGACAAGCCTGGAGGAGGTCCGCACGCTGTGGATCGGC
GACCTCCAGTACTGGACCGACGAGAACTACCTCTACAGCTGCTTCGCCCACACCGGGGAG
GTACAATCTGTTAAAATAATACGCAACAAAGTAACAAGCCTTCCAGAGGGTTATGGGTTT
ATAGAGTTTGTTTCGCATGAAGCTGCTGAGAAAATTCTCCAGACTTACAATGGCACACAG
ATGCCTGGAACTGAACACACATTCAGATTGAATTGGGCCTCTTTCAGCTCCGGTGAGAGG
CGTCCTGATCCAGGATCTGATCATTCGATTTTCGTAGGGGACTTGGCACCTGACGTCACA
GATTACTTACTACAGGAGACATTCCGAGTGAACTATCCATCTGTTAGAGGGGCTAAGGTT
GTCACAGATCCAAATACTGGGAGATCTAAAGGATATGGATTTGTAAAGTTCGCAGATGAA
AATGAAAAGAACCGTGCAATGACAGAAATGAATGGTGTGTACTGTTCAACAAGACCTATG
CGGATAAGTGCAGCAATACCTAAGAAATCCACTGGCTCTCAGCTTCAGTATTCAGCTGCT
AAAGCGGTGTATCCAGCAACAGCTTATGCAATGCCTCAGCTCCAGGCAGTTCTCCCTGAC
AGTGATCCTACAAACACTACAATATTTATTGGGAACTTGGACCCAAATGTGACAGAAGAT
GAGCTGAGGCAGATATGTGTACAATTTGGAGAGCTTATATATGTGAAAATTCCTGTTGGC
AAAGGATGTGGATTTGTACAGTATGCATCTAGGGCCTCAGCTGAAGAGGCAGTACAACGT
CTTCATGGCACAATGATTGGCCAACAAGCTGTTCGGCTTTCATGGGGCCGAAGTCCTGCG
AGTAAACAGGACCCATCAGCTGTGTGGAGTCAGCAAGCAGATCCAAATCAGTGGGCAAAC
ACTTACTATGGCTATGGATATGATGCATATGGATATGCTCAGGATCCGTCATACGCGTAT
GGTGCCTATGCAGGATATAGCCAATATCCCCAACAGATTGAGGGAGGTGTTGATGCCACT
TCTGTTGCTGGTAGCCATCCGGGCATGGAACAAAAAGAGGAGCCATATGATCCAATGAAC
ATACCTGATGTCGACAAGCTGAATGCTTCATACATGGCTGTTCATGGTAGAGCCATGCTA
GGGCGGTCATTGTGGTTGAAGACCAACCCGCTGCCCCAACCAACATAA

Peptide Sequence

PEP ID

EER95414
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:75733314:75737649:-1 gene:SORBI_3001G487100 transcript:EER95414 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAPYHQPTSLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGF
IEFVSHEAAEKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVT
DYLLQETFRVNYPSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPM
RISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVTED
ELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPA
SKQDPSAVWSQQADPNQWANTYYGYGYDAYGYAQDPSYAYGAYAGYSQYPQQIEGGVDAT
SVAGSHPGMEQKEEPYDPMNIPDVDKLNASYMAVHGRAMLGRSLWLKTNPLPQPT

Transcript Sequence

Transcript ID

EER95414
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:75733314:75737649:-1 gene:SORBI_3001G487100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACTCTCAACTCTCAAGCGGCCGCAGCCCCAACCCGCCCTCCGCCTTCGTCCCCGCCGCG
CCTCCGACCCCCAACCAGCCTCTCGCCGCTCGATGGCGGCGCCGTATCACCAGCCGACAA
GCCTGGAGGAGGTCCGCACGCTGTGGATCGGCGACCTCCAGTACTGGACCGACGAGAACT
ACCTCTACAGCTGCTTCGCCCACACCGGGGAGGTACAATCTGTTAAAATAATACGCAACA
AAGTAACAAGCCTTCCAGAGGGTTATGGGTTTATAGAGTTTGTTTCGCATGAAGCTGCTG
AGAAAATTCTCCAGACTTACAATGGCACACAGATGCCTGGAACTGAACACACATTCAGAT
TGAATTGGGCCTCTTTCAGCTCCGGTGAGAGGCGTCCTGATCCAGGATCTGATCATTCGA
TTTTCGTAGGGGACTTGGCACCTGACGTCACAGATTACTTACTACAGGAGACATTCCGAG
TGAACTATCCATCTGTTAGAGGGGCTAAGGTTGTCACAGATCCAAATACTGGGAGATCTA
AAGGATATGGATTTGTAAAGTTCGCAGATGAAAATGAAAAGAACCGTGCAATGACAGAAA
TGAATGGTGTGTACTGTTCAACAAGACCTATGCGGATAAGTGCAGCAATACCTAAGAAAT
CCACTGGCTCTCAGCTTCAGTATTCAGCTGCTAAAGCGGTGTATCCAGCAACAGCTTATG
CAATGCCTCAGCTCCAGGCAGTTCTCCCTGACAGTGATCCTACAAACACTACAATATTTA
TTGGGAACTTGGACCCAAATGTGACAGAAGATGAGCTGAGGCAGATATGTGTACAATTTG
GAGAGCTTATATATGTGAAAATTCCTGTTGGCAAAGGATGTGGATTTGTACAGTATGCAT
CTAGGGCCTCAGCTGAAGAGGCAGTACAACGTCTTCATGGCACAATGATTGGCCAACAAG
CTGTTCGGCTTTCATGGGGCCGAAGTCCTGCGAGTAAACAGGACCCATCAGCTGTGTGGA
GTCAGCAAGCAGATCCAAATCAGTGGGCAAACACTTACTATGGCTATGGATATGATGCAT
ATGGATATGCTCAGGATCCGTCATACGCGTATGGTGCCTATGCAGGATATAGCCAATATC
CCCAACAGATTGAGGGAGGTGTTGATGCCACTTCTGTTGCTGGTAGCCATCCGGGCATGG
AACAAAAAGAGGAGCCATATGATCCAATGAACATACCTGATGTCGACAAGCTGAATGCTT
CATACATGGCTGTTCATGGTAGAGCCATGCTAGGGCGGTCATTGTGGTTGAAGACCAACC
CGCTGCCCCAACCAACATAAGCACACAGCCAACATTGCCTAATTTCCCCCCAAAGACTGC
GGTGCTGGTGGGTGCAGCTGGGTTTCGTTGCAGATGATTTTGCCCTTCCCACTGGGCACA
TTATGGCAATTGATCATCAAACTCTGAAATTGCTGTAGGCTGACCAACAGCTTCGTCTAT
GTTGACAACATCCCATGTATGATAGGCATGACCCTTTTATGTTTCTTAGGCTGCTGCTTA
ATATTATCGTATCTGGACAATATTGTGGGAACGGTGAAAGTCATCTGTCTATCTAGTCGC
CTTTTCCAATTGATAATTCTGCTGTTCGA