Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER95220
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:72493750:72498544:-1 gene:SORBI_3001G447600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTGCTGCTGCTGCGGCGGCCTCCGGCGTCGGGTTCCAGCTCATTGGCGCCGCCGCG
GCCACGCTCCTAGCGGCGGTCCTTGTTGCGGCCGTTCTGGGGCGCCGCCGCCGCCGGGCC
CGGCCCCAGGCGCCTCTGGTGGAAGCCAAACCCGCGCCGGAGGGAGGCTGCGCGGTCGGC
GACGGCCGGACGGACGTCATCATCGTCGGCGCCGGAGTAGCTGGATCTGCGCTGGCATAC
ACGCTGGGAAAGGATGGCCGTCGGGTGCATGTCATCGAGAGGGATCTGACAGAACCTGAC
AGAATTGTGGGTGAACTGTTGCAACCTGGGGGTTACTTGAAATTAATTGAGTTGGGCCTC
GAAGATTGTGTGGAAGAAATTGATGCCCAGCGTGTCCTTGGTTACGCATTATTCAAAGAT
GGGAGGAACACAAAGCTTGCTTATCCCTTGGAGAAGTTCCATTCTGATGTTGCTGGTAGG
AGCTTTCACAATGGGAGGTTTATACAGAGGATGCGTCAAAAAGCTGCGTCTTTGCCCAAT
GTCCAATTAGAGCAAGGAACTGTTACATCACTTCTTGAAGAAAATGGTACTGTTAAAGGT
GTTCAATACAAAACCAAGTCAGGTGAAGAACTAAAAGCTTATGCTCCCCTGACGATTGTA
TGTGATGGTTGCTTTTCAAATCTACGACGCGCCCTTTGCTCTCCAAAGGTTGATGTTCCA
TCATGTTTTGTTGGGCTGGTATTGGAGAATTGCCAACTTCCACATCCAAACCATGGCCAT
GTTATCTTGGCCAATCCTTCTCCAATCCTATTTTACCCAATTAGCAGCACAGAGGTGCGC
TGTTTGGTTGATGTCCCTGGTCAGAAGGTGCCTTCCATAGCTAGCGGTGAAATGGCAAAT
TATCTCAAAACTGTTGTTGCACCCCAGATTCCTCCAGAAATCTACGACTCTTTCATAGCG
GCCATTGATAAGGGAAGCATAAGAACAATGCCAAATAGGAGCATGCCAGCGGCTCCACAT
CCGACCCCTGGGGCACTTTTGATGGGGGATGCATTCAATATGAGACACCCTTTAACTGGT
GGAGGAATGACTGTTGCATTATCCGACATTGTTGTCCTACGTAATCTTCTCAAGCCTCTC
CACAATCTTCATGACGCATCTTCCCTGTGCAAGTACCTTGAATCGTTCTATACACTGCGG
AAGCCGGTTGCTTCCACAATAAACACATTGGCCGGCGCTCTGTACAAGGTCTTCAGTGCC
TCGCCTGATCAAGCTAGGAATGAGATGCGCCAAGCTTGTTTTGATTACTTGAGCCTTGGA
GGCGTCTTCTCAAATGGGCCTATTGCTTTACTCTCCGGTCTTAATCCTCGGCCACTGAGT
TTAGTTGCACACTTCTTTGCTGTTGCTATCTACGGTGTTGGCCGCTTGATGCTCCCTCTT
CCTTCACCTAAGCGAATGTGGATTGGAGCCAGACTGATTTCTGGTGCATGTGGCATCATC
CTCCCTATCATTAAAGCTGAAGGCGTGAGACAGATGTTCTTCCCTGCTACTGTACCTGCA
TATTACCGGGCCGCACCTATGGGAGAATAA

Peptide Sequence

PEP ID

EER95220
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:72493750:72498544:-1 gene:SORBI_3001G447600 transcript:EER95220 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAAAAAASGVGFQLIGAAAATLLAAVLVAAVLGRRRRRARPQAPLVEAKPAPEGGCAVG
DGRTDVIIVGAGVAGSALAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGL
EDCVEEIDAQRVLGYALFKDGRNTKLAYPLEKFHSDVAGRSFHNGRFIQRMRQKAASLPN
VQLEQGTVTSLLEENGTVKGVQYKTKSGEELKAYAPLTIVCDGCFSNLRRALCSPKVDVP
SCFVGLVLENCQLPHPNHGHVILANPSPILFYPISSTEVRCLVDVPGQKVPSIASGEMAN
YLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTG
GGMTVALSDIVVLRNLLKPLHNLHDASSLCKYLESFYTLRKPVASTINTLAGALYKVFSA
SPDQARNEMRQACFDYLSLGGVFSNGPIALLSGLNPRPLSLVAHFFAVAIYGVGRLMLPL
PSPKRMWIGARLISGACGIILPIIKAEGVRQMFFPATVPAYYRAAPMGE

Transcript Sequence

Transcript ID

EER95220
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:72493750:72498544:-1 gene:SORBI_3001G447600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGCCCACCGCTCCTCAACCTCCTCCTCTCCCATAAAACGCGGAAGAATCTCGAAGAGCCG
CCTCGTCCCATCGCTCCTCTCCCTCTCTCTCCGCCCCGCCCCGCCTTCGCCCGCCCCAGA
GTCCCAGACGCATCAAACCACTCTCCTCTTCCCCTCCCTCCCCCCCCTCTCGCAAGCCGC
ATACGCAAGGCCGCAAACGCGCCGCGCACCGGAAGGTCCCAGGGAGCGGCACGAGGAGGC
CCCATTGCGGCATGGCTGCTGCTGCTGCGGCGGCCTCCGGCGTCGGGTTCCAGCTCATTG
GCGCCGCCGCGGCCACGCTCCTAGCGGCGGTCCTTGTTGCGGCCGTTCTGGGGCGCCGCC
GCCGCCGGGCCCGGCCCCAGGCGCCTCTGGTGGAAGCCAAACCCGCGCCGGAGGGAGGCT
GCGCGGTCGGCGACGGCCGGACGGACGTCATCATCGTCGGCGCCGGAGTAGCTGGATCTG
CGCTGGCATACACGCTGGGAAAGGATGGCCGTCGGGTGCATGTCATCGAGAGGGATCTGA
CAGAACCTGACAGAATTGTGGGTGAACTGTTGCAACCTGGGGGTTACTTGAAATTAATTG
AGTTGGGCCTCGAAGATTGTGTGGAAGAAATTGATGCCCAGCGTGTCCTTGGTTACGCAT
TATTCAAAGATGGGAGGAACACAAAGCTTGCTTATCCCTTGGAGAAGTTCCATTCTGATG
TTGCTGGTAGGAGCTTTCACAATGGGAGGTTTATACAGAGGATGCGTCAAAAAGCTGCGT
CTTTGCCCAATGTCCAATTAGAGCAAGGAACTGTTACATCACTTCTTGAAGAAAATGGTA
CTGTTAAAGGTGTTCAATACAAAACCAAGTCAGGTGAAGAACTAAAAGCTTATGCTCCCC
TGACGATTGTATGTGATGGTTGCTTTTCAAATCTACGACGCGCCCTTTGCTCTCCAAAGG
TTGATGTTCCATCATGTTTTGTTGGGCTGGTATTGGAGAATTGCCAACTTCCACATCCAA
ACCATGGCCATGTTATCTTGGCCAATCCTTCTCCAATCCTATTTTACCCAATTAGCAGCA
CAGAGGTGCGCTGTTTGGTTGATGTCCCTGGTCAGAAGGTGCCTTCCATAGCTAGCGGTG
AAATGGCAAATTATCTCAAAACTGTTGTTGCACCCCAGATTCCTCCAGAAATCTACGACT
CTTTCATAGCGGCCATTGATAAGGGAAGCATAAGAACAATGCCAAATAGGAGCATGCCAG
CGGCTCCACATCCGACCCCTGGGGCACTTTTGATGGGGGATGCATTCAATATGAGACACC
CTTTAACTGGTGGAGGAATGACTGTTGCATTATCCGACATTGTTGTCCTACGTAATCTTC
TCAAGCCTCTCCACAATCTTCATGACGCATCTTCCCTGTGCAAGTACCTTGAATCGTTCT
ATACACTGCGGAAGCCGGTTGCTTCCACAATAAACACATTGGCCGGCGCTCTGTACAAGG
TCTTCAGTGCCTCGCCTGATCAAGCTAGGAATGAGATGCGCCAAGCTTGTTTTGATTACT
TGAGCCTTGGAGGCGTCTTCTCAAATGGGCCTATTGCTTTACTCTCCGGTCTTAATCCTC
GGCCACTGAGTTTAGTTGCACACTTCTTTGCTGTTGCTATCTACGGTGTTGGCCGCTTGA
TGCTCCCTCTTCCTTCACCTAAGCGAATGTGGATTGGAGCCAGACTGATTTCTGGTGCAT
GTGGCATCATCCTCCCTATCATTAAAGCTGAAGGCGTGAGACAGATGTTCTTCCCTGCTA
CTGTACCTGCATATTACCGGGCCGCACCTATGGGAGAATAAGCATGAACAGAGCACCGAT
TCCGTGCTGCTGATCCGACCATGATATATGATGGCAACTGATGTTTCACGGATGGCATTT
TTCCTGTATTAGTTGGTTGGTTGTTCGTTGTGTTAGCTGGTTGTATGTCCCGTCATTGGA
ATGAGGAACCTGTATAGTGTGTGCCCTGGCTACTGGTAAGTTAGAAAATGTGTTGGGTTT
GTTCTGTATGCATGCCGATTATTGCCAAGCTGTACATGACTCTGTTGAACTAGTAAAACG
TCCCCTTCTTCCATGCTG