Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER95171
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:71435489:71437607:-1 gene:SORBI_3001G436100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCCGCAGCTGACCGGCGCGCCCGGCTCGGCGGCCGCGTCTGGCGGCGCGGCGGCC
GTCAAGCCGCAGTTCCACCACTACCACCACCACCGCCTGCCCCCGCGCCACCACCACCCC
TCGCCGACCTCGCTCCTCTCCAAGCTCGCCTTCTGGTCCGTCTGCTCCCTCTCCCTCCTC
CTCGCCTTCCTCCTCCTCTCCCCCGCGGCGCCCGCCCCGCGGGCCGCGCCCGAGTCGCCG
CGCCGCTCCCTCCACGCCTCCCCCTCCTCCACCGCCTCCTGGGGCGGCGCCGCCTGGGAG
AAGAAGGTGCGGGCGTCGGCGCGCGTCAGGCGCTCCATGGGCCACTCCGTCCTCGTCACG
GGCGCCGCGGGCTTCGTAGGCTGCCACGCCGCCGCCGCGCTTCGCCGCCGAGGGGACGGC
GTGCTCGGCCTCGACAACTTCAACGACTACTACGACACGGGCCTCAAGCGCGGCCGCGCC
GCGCTCCTCGCCCGCTCCGGGGTCTACGTCGTCGACGGTGACATCGCTGATGCCGAGCTC
CTCGCCAAGCTGTTCGACGTTGTGCCCTTCACACACGTCCTCCACCTCGCCGCGCAAGCG
GGCGTGCGGCACGCGCTCGTGGACCCCATGTCTTATGTGCGCGCCAACGTTGCCGGTCTC
GTGGCGCTGCTCGAGGCGGCGCGCGCGGCCAACCCTCAGCCCGCCATCGTCTGGGCCTCG
TCGTCTTCGGTGTACGGGCTCAACTCCCATGTGCCTTTCTCCGAGCATGACAGGACGGAT
CGACCAGCCTCTCTCTATGCAGCCACCAAAAAGGCCGGTGAGGAGATCGCTCATGTCTAC
AACCACATCTATGGTCTGTCACTCACCGCCCTCAGATTCTTCACTGTGTATGGGCCATGG
GGGCGTCCGGACATGGCCTACTTCTTCTTCACCAGGGACATCCTTGCTGGTCGGCCAATC
ACGGTCTATGAGAGTGCCGGTGGAGGTTCACACCAGACAACCATCTCCCGGGATTTCACC
TACATTGATGACATTGTGAAGGGGTGTGTAGCGGCATTGGATACAGCTGGTCGGAGCACA
GGCAGTGGAGGCAAGAAGCGAGGTACAGCACCGTTCAGGACATACAATTTGGGCAACACT
TCACCTGTGCCTGTTACACAGCTAGTCGATTTGCTGGAGAAACTGCTGAAAGTGAAGGCT
GTGAGGAAGGTTGTTAAGATGCCAAGGAATGGAGATGTGCCATACACGCATGCTAATGTA
AGCCTTGCGCAGAGGGAGCTCGGTTACCGGCCATCCACAGATCTGCAAACAGGGCTCAAG
AAGTTTGTGCGGTGGTATCTTGAGTACTACCATCCTGAGCTGGCTGAGAAGCAGAAGCTG
CGTACCAGTAGCAATGGCAAGGGTTCACGTGGTCGGAATGGCAGCTCAAGTAGTGCAAGA
TGA

Peptide Sequence

PEP ID

EER95171
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:71435489:71437607:-1 gene:SORBI_3001G436100 transcript:EER95171 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAPQLTGAPGSAAASGGAAAVKPQFHHYHHHRLPPRHHHPSPTSLLSKLAFWSVCSLSLL
LAFLLLSPAAPAPRAAPESPRRSLHASPSSTASWGGAAWEKKVRASARVRRSMGHSVLVT
GAAGFVGCHAAAALRRRGDGVLGLDNFNDYYDTGLKRGRAALLARSGVYVVDGDIADAEL
LAKLFDVVPFTHVLHLAAQAGVRHALVDPMSYVRANVAGLVALLEAARAANPQPAIVWAS
SSSVYGLNSHVPFSEHDRTDRPASLYAATKKAGEEIAHVYNHIYGLSLTALRFFTVYGPW
GRPDMAYFFFTRDILAGRPITVYESAGGGSHQTTISRDFTYIDDIVKGCVAALDTAGRST
GSGGKKRGTAPFRTYNLGNTSPVPVTQLVDLLEKLLKVKAVRKVVKMPRNGDVPYTHANV
SLAQRELGYRPSTDLQTGLKKFVRWYLEYYHPELAEKQKLRTSSNGKGSRGRNGSSSSAR

Transcript Sequence

Transcript ID

EER95171
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:71435489:71437607:-1 gene:SORBI_3001G436100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGGTGCTCCTCATCATATCATACATCATCATACAATGAAAAAAAAATCCAAATCTAAAAG
GGGAAGGTAAAGTAGAGACGAGAAAAATGCACGGGATTTCTCCCCAAATGTAGCCCCCCT
CCGCGAACCAAATCCCCCGAAACAGGCCCGTCGAAAAAACCATCCCCACTCGAAAAAACG
GCAGCAGCAAAAGGTCCCGCAAACCCAAGCGCCGCCGCGGACCCAATCGCCCCCAATCGC
CCCGAGCCGAGATCCAGGGACCGTCCAGCCGCATTGCTGCGGATCGACGAAGGGATGGCG
CCGCAGCTGACCGGCGCGCCCGGCTCGGCGGCCGCGTCTGGCGGCGCGGCGGCCGTCAAG
CCGCAGTTCCACCACTACCACCACCACCGCCTGCCCCCGCGCCACCACCACCCCTCGCCG
ACCTCGCTCCTCTCCAAGCTCGCCTTCTGGTCCGTCTGCTCCCTCTCCCTCCTCCTCGCC
TTCCTCCTCCTCTCCCCCGCGGCGCCCGCCCCGCGGGCCGCGCCCGAGTCGCCGCGCCGC
TCCCTCCACGCCTCCCCCTCCTCCACCGCCTCCTGGGGCGGCGCCGCCTGGGAGAAGAAG
GTGCGGGCGTCGGCGCGCGTCAGGCGCTCCATGGGCCACTCCGTCCTCGTCACGGGCGCC
GCGGGCTTCGTAGGCTGCCACGCCGCCGCCGCGCTTCGCCGCCGAGGGGACGGCGTGCTC
GGCCTCGACAACTTCAACGACTACTACGACACGGGCCTCAAGCGCGGCCGCGCCGCGCTC
CTCGCCCGCTCCGGGGTCTACGTCGTCGACGGTGACATCGCTGATGCCGAGCTCCTCGCC
AAGCTGTTCGACGTTGTGCCCTTCACACACGTCCTCCACCTCGCCGCGCAAGCGGGCGTG
CGGCACGCGCTCGTGGACCCCATGTCTTATGTGCGCGCCAACGTTGCCGGTCTCGTGGCG
CTGCTCGAGGCGGCGCGCGCGGCCAACCCTCAGCCCGCCATCGTCTGGGCCTCGTCGTCT
TCGGTGTACGGGCTCAACTCCCATGTGCCTTTCTCCGAGCATGACAGGACGGATCGACCA
GCCTCTCTCTATGCAGCCACCAAAAAGGCCGGTGAGGAGATCGCTCATGTCTACAACCAC
ATCTATGGTCTGTCACTCACCGCCCTCAGATTCTTCACTGTGTATGGGCCATGGGGGCGT
CCGGACATGGCCTACTTCTTCTTCACCAGGGACATCCTTGCTGGTCGGCCAATCACGGTC
TATGAGAGTGCCGGTGGAGGTTCACACCAGACAACCATCTCCCGGGATTTCACCTACATT
GATGACATTGTGAAGGGGTGTGTAGCGGCATTGGATACAGCTGGTCGGAGCACAGGCAGT
GGAGGCAAGAAGCGAGGTACAGCACCGTTCAGGACATACAATTTGGGCAACACTTCACCT
GTGCCTGTTACACAGCTAGTCGATTTGCTGGAGAAACTGCTGAAAGTGAAGGCTGTGAGG
AAGGTTGTTAAGATGCCAAGGAATGGAGATGTGCCATACACGCATGCTAATGTAAGCCTT
GCGCAGAGGGAGCTCGGTTACCGGCCATCCACAGATCTGCAAACAGGGCTCAAGAAGTTT
GTGCGGTGGTATCTTGAGTACTACCATCCTGAGCTGGCTGAGAAGCAGAAGCTGCGTACC
AGTAGCAATGGCAAGGGTTCACGTGGTCGGAATGGCAGCTCAAGTAGTGCAAGATGACTG
TCTATTCAGTGTCTTCGTGGCCTCTCCTGACGGTGTGTATCAGAATTCTACCTCCATTCC
TTAATTCATCAGATTGAGAGGCTCATTTTGCTCAGCAAATTGTGAAAGTGGAACAGAAGT
TAAGAAACACTCATTAGGTAGCCATCATAATTCAAAAGCCTGATGCTTCTCTTTGCTACC
TCGTAGCTAAGCATTTAATTCCTAGTTCCATTAGTTGGTTCTTAGGATGACACTGTTCCG
AAGATTTTTCATGTCATGGGTTTTGGGGGATGGCACTCTGTTGCGTAGACTACCATAGAT
TCTTTTAGTGACTTTTTGTACCACGGAAGAGAACTAAGTATATCATGACTTGCTTTTGTT
CAATTGAAGTTGAAGTGGC