Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER95009
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:68712092:68718271:-1 gene:SORBI_3001G401700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAGCAGCCCCTGCCGGTGCCCCCGCAATCACCGCCTCATCCTCCTTTCTTGCTTCG
CCGCCGTTCGCTCTCAAGGCATCGACGACTAGCCACCGCCGACCTGCGGGGAGAGTCTCC
GTCAACATCCGCTGCGTCAGTAGCCCGCCGGCCGTCGACACATCTTACAAGACTAATGTC
CCGCGCAATGCTAACATGGCCAAGCTCCAAGCAGGATATCTGTTTCCTGAGATTGCCAGG
AGAAGAGCAGCTCATTTGCTGAAGTATCCAGATGCCAAGATAATAAGCCTTGGGATAGGT
GACACTACCGAGCCCATTCCAAATGTCATAACAAATGCCATGGCAGAGAGAGCACTTGCC
TTGTCAACAATTGATGGCTACAGCGGTTATGGAGCCGAGCAAGGTGAAAAGAAACTCAGA
GCAGCAATTGCTGCAACCTACTATGCGGACCTTGGTATTGAAGATTCAGATATTTTTGTC
TCTGATGGTGCCAAGTGTGACATATCTCGCTTGCAGGTCCTTTTTGGATCTAATGTGACA
ATTGCGGTCCAAGATCCCTCATACCCTGCATATGTTGATTCAAGTGTTATCATGGGCCAA
ACTGACTTATATCAGCAAGATGTTCAGAAGTACGGAAACATTCAATACATGAGATGCAGT
CCAGAAAATGGATTTTTCCCTGATCTGTCAACTATCCCTCGGACAGATATTATTTTCTTT
TGTTCACCCAACAATCCTACTGGTGCTGCTGCATCTCGGGACCAACTGACCAAATTAGTA
AAATTTGCAAAGGACAATGGGTCCATCATTGTCTATGATTCTGCTTATGCAATGTACATA
TCAGATGACAGCCCAAAGTCTATCTTTGAAATTCCTGGAGCAAAGGAGGTTGCTCTTGAG
ACAGCGTCATTCTCGAAATATGCTGGGTTCACTGGTGTCCGTCTAGGTTGGACTGTTGTC
CCCAAGGAGCTCCTTTTCTCTGATGGACATCCAGTTGCTAAAGATTTCAATCGCATAGTC
TGCACTTGCTTCAATGGTGCATCAAACATTTCACAAGCTGGTGGTTTAGCTTGCCTCTCT
CCAGAGGGTCTGAAGGCTATGCATGATGTTGTTGGCTTCTACAAGGAGAACACTGAAATA
ATTGTTGACACATTTACATCACTTGGATTCAACGTGTATGGTGCGAAGAACGCTCCTTAC
GTATGGGTGCACTTCCCTGGCCGCAATTCGTGGGACGTGTTTGCTGAGATCCTGGAGAAG
GCGAATGTGGTTACTACTCCTGGCAGTGGATTTGGACCGGGTGGCGAAGGCTTTGTGAGG
GTCAGCGCATTCGGACACAGAGATAACATCATTGAAGCTGCAAGGAGATTAAAGCAGCTG
TACAAGTGA

Peptide Sequence

PEP ID

EER95009
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:68712092:68718271:-1 gene:SORBI_3001G401700 transcript:EER95009 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAAPAGAPAITASSSFLASPPFALKASTTSHRRPAGRVSVNIRCVSSPPAVDTSYKTNV
PRNANMAKLQAGYLFPEIARRRAAHLLKYPDAKIISLGIGDTTEPIPNVITNAMAERALA
LSTIDGYSGYGAEQGEKKLRAAIAATYYADLGIEDSDIFVSDGAKCDISRLQVLFGSNVT
IAVQDPSYPAYVDSSVIMGQTDLYQQDVQKYGNIQYMRCSPENGFFPDLSTIPRTDIIFF
CSPNNPTGAAASRDQLTKLVKFAKDNGSIIVYDSAYAMYISDDSPKSIFEIPGAKEVALE
TASFSKYAGFTGVRLGWTVVPKELLFSDGHPVAKDFNRIVCTCFNGASNISQAGGLACLS
PEGLKAMHDVVGFYKENTEIIVDTFTSLGFNVYGAKNAPYVWVHFPGRNSWDVFAEILEK
ANVVTTPGSGFGPGGEGFVRVSAFGHRDNIIEAARRLKQLYK

Transcript Sequence

Transcript ID

EER95009
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:68712092:68718271:-1 gene:SORBI_3001G401700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCAGGTGTGCCATGGACGCCAGAAACGTTCCCTGACGATCTGTTCTCTCTCTCTCGGGAA
GGCCCAGCCGAGCCAAACAGGATAGCACAGCCCATGAACTATCAAGTCAAGTTCATTTGC
ATAGGCCACGGCCCGTGTAAAAGAATTACATGGACCCTGGGTCCAAAGAGATACGGGTAA
GCCCACGGCCCGCGTAAAAAAGCCACATCGCTCCGTACTCCCTGTCTCCCTCCGTGTCCC
TCCAGTCGCCCAAGCTCGACGTCCCTACCCAGCCGCCGCCGCCTCCTCTCCTGCCGTCCG
TAGAGCCGTCGCGATGGCAGCAGCCCCTGCCGGTGCCCCCGCAATCACCGCCTCATCCTC
CTTTCTTGCTTCGCCGCCGTTCGCTCTCAAGGCATCGACGACTAGCCACCGCCGACCTGC
GGGGAGAGTCTCCGTCAACATCCGCTGCGTCAGTAGCCCGCCGGCCGTCGACACATCTTA
CAAGACTAATGTCCCGCGCAATGCTAACATGGCCAAGCTCCAAGCAGGATATCTGTTTCC
TGAGATTGCCAGGAGAAGAGCAGCTCATTTGCTGAAGTATCCAGATGCCAAGATAATAAG
CCTTGGGATAGGTGACACTACCGAGCCCATTCCAAATGTCATAACAAATGCCATGGCAGA
GAGAGCACTTGCCTTGTCAACAATTGATGGCTACAGCGGTTATGGAGCCGAGCAAGGTGA
AAAGAAACTCAGAGCAGCAATTGCTGCAACCTACTATGCGGACCTTGGTATTGAAGATTC
AGATATTTTTGTCTCTGATGGTGCCAAGTGTGACATATCTCGCTTGCAGGTCCTTTTTGG
ATCTAATGTGACAATTGCGGTCCAAGATCCCTCATACCCTGCATATGTTGATTCAAGTGT
TATCATGGGCCAAACTGACTTATATCAGCAAGATGTTCAGAAGTACGGAAACATTCAATA
CATGAGATGCAGTCCAGAAAATGGATTTTTCCCTGATCTGTCAACTATCCCTCGGACAGA
TATTATTTTCTTTTGTTCACCCAACAATCCTACTGGTGCTGCTGCATCTCGGGACCAACT
GACCAAATTAGTAAAATTTGCAAAGGACAATGGGTCCATCATTGTCTATGATTCTGCTTA
TGCAATGTACATATCAGATGACAGCCCAAAGTCTATCTTTGAAATTCCTGGAGCAAAGGA
GGTTGCTCTTGAGACAGCGTCATTCTCGAAATATGCTGGGTTCACTGGTGTCCGTCTAGG
TTGGACTGTTGTCCCCAAGGAGCTCCTTTTCTCTGATGGACATCCAGTTGCTAAAGATTT
CAATCGCATAGTCTGCACTTGCTTCAATGGTGCATCAAACATTTCACAAGCTGGTGGTTT
AGCTTGCCTCTCTCCAGAGGGTCTGAAGGCTATGCATGATGTTGTTGGCTTCTACAAGGA
GAACACTGAAATAATTGTTGACACATTTACATCACTTGGATTCAACGTGTATGGTGCGAA
GAACGCTCCTTACGTATGGGTGCACTTCCCTGGCCGCAATTCGTGGGACGTGTTTGCTGA
GATCCTGGAGAAGGCGAATGTGGTTACTACTCCTGGCAGTGGATTTGGACCGGGTGGCGA
AGGCTTTGTGAGGGTCAGCGCATTCGGACACAGAGATAACATCATTGAAGCTGCAAGGAG
ATTAAAGCAGCTGTACAAGTGAGCACCGATGCTGCTTCTGTGCCCTCGAAAGATGGTATC
AATAAGAACACAGCAGCATTTCGGACACCAAAATTCGCTCGCTGAAGCTGCTAGAAGATG
TTAGAAGTGAGAACATGATTTTTTTGGGAGCATGATTTTCTTTTAGTAGGCTTTCGTGTT
GTGTACTACATTCAAACCATTTCCAACTCTAGACAATGCTTGTTGTAGTCCTGAGACTCT
TCAATCACTGGCGAAGTGTTTATCTCGTCTGTGTTCGTTTTTGTGCCCTGCTGTTGCTGT
TTCTTAATCCATATCAAATTATATGACGTT