Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER94890
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:66777858:66782242:-1 gene:SORBI_3001G379200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCCGCCGCCGCCGCCATCGCCACGGCGTCGGCGTCGTGGCTTCTCAAGAGGTCT
ATATCCTCCGCTTTCCTTGCGAGGCGCGCGGGCCCTAGCATCCTGCGTACAGCCCTTAGC
TATTCCTCCTCCGCATCCGCCTGCCCCAAACCAGCGCCGTCCCTGTCTCCGCCTGACACA
TCCGCCAATGATGGAGGCGGCGGGATGAGGTGGGAGTCTGCGCGCAAGAAGAGAGTGGTG
CTCCGCATCGGCTACATAGGCACCGAATACCGAGGGCTTCAAAAGCAGCGAGAGCTTGGC
GTGGATTCGACCATTGAGTCAGTCTTGGAATCTGCCATCTTCAAGTCAGGTGGAATTCTT
GAGAGTAATTATGGAAAACTGCAAAAGGTTGGGTGGGAGAGGAGTAGCCGAACTGATAAA
GGGGTACACTCACTGGCTACAATGATTTCCCTTAAAATGGAAATCCCTGATAGAGCGTGG
GAGGATGATCCTGATGGCATTGCTCTTGCCAGTTTCATCAACTCAAATTTGCCGGACAAT
GTGAGGGTTTTTAGTATCTTGCCTGCACAAAGGAGTTTTGATGTGAGGAGGGAGTGCTTA
TACCGTGAGTACTTCTATCTTCTTCCTGCTGAAGTTATTGGAATCAAAGATGGTTATAGC
CCTGAAGAAATACAAGAGCACTTGTCAGAATTCAACAGCATACTGAAAGGCTTCGAGGGA
AACCATCCATTTCATAATTACACTGCACGTGCCAAGTACAGGAAGGTTCTTGCGGGAAGG
CACCCGAGGGCCAAAGGAGCAAGCTTGACGTTGAAGTCCATGTCCTCTGAAATGGGTATG
GCAGAAAGCTCTTCTTTAGAAAGCACTTCTTCAGATGATGATGAGGACTTGAATATTTCA
TCAATCGACTCTGGTGCATCAGAAAACATTTTTGTGAATGATATCCTGAAATTTTCTGAG
AGTCGAGTGCAGATTCAAGCTAGGTGGCTGCATGAACCTGATGAAAGTGATAGATTAAAT
GCTTCACATTTCAGAGATATCATTACCTGTTCATGTGGAGAGTTGCAAACTTCATCAGGA
ATTCAATTTGTGGAATTGACCATATGTGGGGTATCTTTCATGCTACACCAGATCCGGAAA
ATGGTTGGAACTGCCGTGGCAGTGAAGCGTGGATTACTACCCAAAGATATCATAGAACTG
TCTCTTGCAAAGTTTTCTAGAATCGTTCTACCAATAGCCCCTTCAGAAGTTCTGATCCTT
AAGGACAATAGTTTCTGCACAAAGAGCAAGGAAGGGAGAATCGTACGCCCTGGGATCCAG
TCAATGAACAAGTCAGCAGCAATCAGGAAGGGGGTTGAGGAATTCTACAAGGCAGCTCTT
CTGCCAGAAGTAGCGAAATTCTTGGATCCTGCTGTGCCACCATGGAAAGAGTGGGTGGAG
AACTTGGACAGGTTTGCTGGCATATCAGATTCGCAGCTGGACGAAGTTAGGGAGGCCTAC
AGAGCATGGAAGGCTGATTATGACCGCGTGAAAATGGCTAGAAAGAGTGCTAGCAGTGTC
TAA

Peptide Sequence

PEP ID

EER94890
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:66777858:66782242:-1 gene:SORBI_3001G379200 transcript:EER94890 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAAAAAIATASASWLLKRSISSAFLARRAGPSILRTALSYSSSASACPKPAPSLSPPDT
SANDGGGGMRWESARKKRVVLRIGYIGTEYRGLQKQRELGVDSTIESVLESAIFKSGGIL
ESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDN
VRVFSILPAQRSFDVRRECLYREYFYLLPAEVIGIKDGYSPEEIQEHLSEFNSILKGFEG
NHPFHNYTARAKYRKVLAGRHPRAKGASLTLKSMSSEMGMAESSSLESTSSDDDEDLNIS
SIDSGASENIFVNDILKFSESRVQIQARWLHEPDESDRLNASHFRDIITCSCGELQTSSG
IQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLIL
KDNSFCTKSKEGRIVRPGIQSMNKSAAIRKGVEEFYKAALLPEVAKFLDPAVPPWKEWVE
NLDRFAGISDSQLDEVREAYRAWKADYDRVKMARKSASSV

Transcript Sequence

Transcript ID

EER94890
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:66777858:66782242:-1 gene:SORBI_3001G379200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTGGGCCACTCCTCCTCGCATCGCCCCCCTCGACGATGGCCGCCGCCGCCGCCGCCATCG
CCACGGCGTCGGCGTCGTGGCTTCTCAAGAGGTCTATATCCTCCGCTTTCCTTGCGAGGC
GCGCGGGCCCTAGCATCCTGCGTACAGCCCTTAGCTATTCCTCCTCCGCATCCGCCTGCC
CCAAACCAGCGCCGTCCCTGTCTCCGCCTGACACATCCGCCAATGATGGAGGCGGCGGGA
TGAGGTGGGAGTCTGCGCGCAAGAAGAGAGTGGTGCTCCGCATCGGCTACATAGGCACCG
AATACCGAGGGCTTCAAAAGCAGCGAGAGCTTGGCGTGGATTCGACCATTGAGTCAGTCT
TGGAATCTGCCATCTTCAAGTCAGGTGGAATTCTTGAGAGTAATTATGGAAAACTGCAAA
AGGTTGGGTGGGAGAGGAGTAGCCGAACTGATAAAGGGGTACACTCACTGGCTACAATGA
TTTCCCTTAAAATGGAAATCCCTGATAGAGCGTGGGAGGATGATCCTGATGGCATTGCTC
TTGCCAGTTTCATCAACTCAAATTTGCCGGACAATGTGAGGGTTTTTAGTATCTTGCCTG
CACAAAGGAGTTTTGATGTGAGGAGGGAGTGCTTATACCGTGAGTACTTCTATCTTCTTC
CTGCTGAAGTTATTGGAATCAAAGATGGTTATAGCCCTGAAGAAATACAAGAGCACTTGT
CAGAATTCAACAGCATACTGAAAGGCTTCGAGGGAAACCATCCATTTCATAATTACACTG
CACGTGCCAAGTACAGGAAGGTTCTTGCGGGAAGGCACCCGAGGGCCAAAGGAGCAAGCT
TGACGTTGAAGTCCATGTCCTCTGAAATGGGTATGGCAGAAAGCTCTTCTTTAGAAAGCA
CTTCTTCAGATGATGATGAGGACTTGAATATTTCATCAATCGACTCTGGTGCATCAGAAA
ACATTTTTGTGAATGATATCCTGAAATTTTCTGAGAGTCGAGTGCAGATTCAAGCTAGGT
GGCTGCATGAACCTGATGAAAGTGATAGATTAAATGCTTCACATTTCAGAGATATCATTA
CCTGTTCATGTGGAGAGTTGCAAACTTCATCAGGAATTCAATTTGTGGAATTGACCATAT
GTGGGGTATCTTTCATGCTACACCAGATCCGGAAAATGGTTGGAACTGCCGTGGCAGTGA
AGCGTGGATTACTACCCAAAGATATCATAGAACTGTCTCTTGCAAAGTTTTCTAGAATCG
TTCTACCAATAGCCCCTTCAGAAGTTCTGATCCTTAAGGACAATAGTTTCTGCACAAAGA
GCAAGGAAGGGAGAATCGTACGCCCTGGGATCCAGTCAATGAACAAGTCAGCAGCAATCA
GGAAGGGGGTTGAGGAATTCTACAAGGCAGCTCTTCTGCCAGAAGTAGCGAAATTCTTGG
ATCCTGCTGTGCCACCATGGAAAGAGTGGGTGGAGAACTTGGACAGGTTTGCTGGCATAT
CAGATTCGCAGCTGGACGAAGTTAGGGAGGCCTACAGAGCATGGAAGGCTGATTATGACC
GCGTGAAAATGGCTAGAAAGAGTGCTAGCAGTGTCTAATTTCATCACAACACTACCTCGG
ATGGGCAACTGAACTGAACTGTTCACTGTGAAGAGTGGTGTTTTGCACTTTCAGCCGCTT
ACTTGTAATGGACCTGTAGGGTTGGCAATGTTGCCACCTGTATGGTGGTTCTGGACGAGG
GCATTTAGTTCAAACCTGAAATGATTCCTAGAGATTTGGATCTGTATTGAGGCCCTGGAT
GTTGCAAGCATTTCTGCTCTGCCGAGGCCCGAGGGGTACAAGGTTGAGAGCCACAAAAGG
GGTTGGGTGCCCCACTGCAGGACAATTCACAGGTATGCAGAATTTTGCTTTCATTGCATT
GCATTGCAGATTTGATGATTAAAGTCAATCAAGCAAAAAAAACACCTCTAATATATACAC
TCGTATGGCTCCGTTGTAATTCCCTCCATTTTGTTTTGAGTGGACAATGAATATCAAGCA
AGCAGCCAGCGTGCGTGCGTGCGTGCATTGTTGTTCAGTTGATGCTACTAGAGGAGTATA
TTTCTGTATTCACATGGAGCCATTTGGATTTCAAGGCACATGCACGGATGCACCCCCGTG
CTCGGTTTC