Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER94841
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:65683879:65691600:-1 gene:SORBI_3001G368100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGACATCGCCGCCGCAGAACCCTAGCTCCGGCGATCCCTCCGATGCGTCGAGCCTC
GCCGCCGCGGCGCTCGAGGCGCCCGGGCGCGTATGGAGATCCCTCGTCGCGCGCCTCCCT
CCCCTCCCGGACTCCTCCAGCTTCCTTGCTGCCGTCTCCGACCTCCAGCGCCGCTACTTC
GGCGTCCGCCGGCCCCGCCGCCGCAGGCGCTCCGCTCTACCTCTCCCGCTCCGTCCCGCG
GCCGCACACTCCGCTCGGATTGCTGGTGAGATGCCCAAAGCCTTTGTCATCTTAGATGAT
GTTGTGCAACACACCCTGACTAATTTGCACACTATTCACAAAAGCTTACTATTTTGGCAG
GCCAAAGCTGAGGGAACAAATTCTCAGAAAGTGTACTTTATGATCTTTGAGAGAGGTCCA
AGGGCCTTTGTTGATGCAACATATCAAACACTCACTAGACCCGGAAGCAATGGACGTCCA
GTCCAATACATTTTGCATTCTGCATCTGATATGGTGTCAACAAAACTTGCTGCCTTGACA
AGTATGCAACATTGCTTGGCCGCTTTTCTTGCAGAGATTCATTCTGAAGTTGATAGATGC
AGAGAAGGATTAACTGAAAACTCAGACAAATCTCTGCATACATTGTTCATTGTTTTAAAT
ACGACATTCTCCAAGTTGGAGGTATCACTGAGAAATGCTGGTGAGGGGCAAGATGAACTA
TTTACACATGATGGAAATTCATATGAGCTGTTTGGGAAATTGCCGGAAGTCGATGTAGAG
AGTTCAGAATGGACAGAGGCCTTGGCAACAGATGGTACAAGTTTAGTCTATCAAAACCTT
CAGAAGTTGGATAGTTTCCTGTCCTCTCAGCTCTCAAGCCATAAAAGACCAAACAGATTG
ACCATATACTGGTTACCCTATACATGTGGAGCAGTGGGTCTCTCTGTGTGTTCTCTGTGG
CTTTTACGTCATAGCAGCTTGATGGGAAGTCCCGATATCGACAATTGGGTTCGAGATGCT
AAGGAGTCTGTGGCTGGATTTTGGGATGAACATGTTGAGAAACCAATCATTTCCATTAGA
GATGAGCTTTTCGAGACATTCAAGCAAAGAGATAAAGGTGTAATGGAACAGCAAGAGGTC
CAACTGACTGAAGATTCATTGCGCAGGATGTTAGTTGCCTTTTGTGAGCAAACAGAGGGT
CGGAAGTTGCCAGAAGATTTAGCAGTGCAGGCGATGTTGGAGACTCTCACGAAGAGATAT
GAGAAGGAATTGATACATCCAATTCAAAACCTCTTCAGTGGAGAATTAGCCCGTGCTATG
CTTATTCAGATTCAAAAGCTTAAACTGGATCTTGAATCGGGACTGCTGGAGATGGATCAG
ATTCTTAGGGCAAATGCTATAAACTTTGCCGTTCTTGCAGCTCTGCCTGCTTTTGGTCTC
TCACTTCTGCTGCTTGTGTTACTGCGAACATGGATTCAGCGTGATCATGGTGCTGAGGGA
AGAGGTAATATTGCACGATGTCAACGGAGGCTGCTTCTTGTTGATGTAGAGAGAAGGCTT
ATGGAGTTTCAGCATTACAGGGATAATGGAATGGAGGAAGAGGCACGGTGCAAGTTTGGA
CTAGTACTTTACACGCTTGATAGACTGTGCAAAGCTGTTGAGTCACACGCAAAAGAAACA
GGCGAATGGTTAAGCTTGAGAGAAGACATTTTTGATCTGGCAAAGCTCGACATGGGAACG
CCAGACAAGATGATTGTCGTGTCACGGTTGAAGTGGATGTATAACTGCTTGCTTCCATTC
TCATCGAGCCGTTTGCCACGTCTCTAG

Peptide Sequence

PEP ID

EER94841
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:65683879:65691600:-1 gene:SORBI_3001G368100 transcript:EER94841 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATSPPQNPSSGDPSDASSLAAAALEAPGRVWRSLVARLPPLPDSSSFLAAVSDLQRRYF
GVRRPRRRRRSALPLPLRPAAAHSARIAGEMPKAFVILDDVVQHTLTNLHTIHKSLLFWQ
AKAEGTNSQKVYFMIFERGPRAFVDATYQTLTRPGSNGRPVQYILHSASDMVSTKLAALT
SMQHCLAAFLAEIHSEVDRCREGLTENSDKSLHTLFIVLNTTFSKLEVSLRNAGEGQDEL
FTHDGNSYELFGKLPEVDVESSEWTEALATDGTSLVYQNLQKLDSFLSSQLSSHKRPNRL
TIYWLPYTCGAVGLSVCSLWLLRHSSLMGSPDIDNWVRDAKESVAGFWDEHVEKPIISIR
DELFETFKQRDKGVMEQQEVQLTEDSLRRMLVAFCEQTEGRKLPEDLAVQAMLETLTKRY
EKELIHPIQNLFSGELARAMLIQIQKLKLDLESGLLEMDQILRANAINFAVLAALPAFGL
SLLLLVLLRTWIQRDHGAEGRGNIARCQRRLLLVDVERRLMEFQHYRDNGMEEEARCKFG
LVLYTLDRLCKAVESHAKETGEWLSLREDIFDLAKLDMGTPDKMIVVSRLKWMYNCLLPF
SSSRLPRL

Transcript Sequence

Transcript ID

EER94841
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:65683879:65691600:-1 gene:SORBI_3001G368100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCAAGCTTAAACCCAAGGGAAAATTTCAAACCCGAAACCCACTAGTGCCGCCCACAC
GAATTCCCGTACCCCAATGGCGACATCGCCGCCGCAGAACCCTAGCTCCGGCGATCCCTC
CGATGCGTCGAGCCTCGCCGCCGCGGCGCTCGAGGCGCCCGGGCGCGTATGGAGATCCCT
CGTCGCGCGCCTCCCTCCCCTCCCGGACTCCTCCAGCTTCCTTGCTGCCGTCTCCGACCT
CCAGCGCCGCTACTTCGGCGTCCGCCGGCCCCGCCGCCGCAGGCGCTCCGCTCTACCTCT
CCCGCTCCGTCCCGCGGCCGCACACTCCGCTCGGATTGCTGGTGAGATGCCCAAAGCCTT
TGTCATCTTAGATGATGTTGTGCAACACACCCTGACTAATTTGCACACTATTCACAAAAG
CTTACTATTTTGGCAGGCCAAAGCTGAGGGAACAAATTCTCAGAAAGTGTACTTTATGAT
CTTTGAGAGAGGTCCAAGGGCCTTTGTTGATGCAACATATCAAACACTCACTAGACCCGG
AAGCAATGGACGTCCAGTCCAATACATTTTGCATTCTGCATCTGATATGGTGTCAACAAA
ACTTGCTGCCTTGACAAGTATGCAACATTGCTTGGCCGCTTTTCTTGCAGAGATTCATTC
TGAAGTTGATAGATGCAGAGAAGGATTAACTGAAAACTCAGACAAATCTCTGCATACATT
GTTCATTGTTTTAAATACGACATTCTCCAAGTTGGAGGTATCACTGAGAAATGCTGGTGA
GGGGCAAGATGAACTATTTACACATGATGGAAATTCATATGAGCTGTTTGGGAAATTGCC
GGAAGTCGATGTAGAGAGTTCAGAATGGACAGAGGCCTTGGCAACAGATGGTACAAGTTT
AGTCTATCAAAACCTTCAGAAGTTGGATAGTTTCCTGTCCTCTCAGCTCTCAAGCCATAA
AAGACCAAACAGATTGACCATATACTGGTTACCCTATACATGTGGAGCAGTGGGTCTCTC
TGTGTGTTCTCTGTGGCTTTTACGTCATAGCAGCTTGATGGGAAGTCCCGATATCGACAA
TTGGGTTCGAGATGCTAAGGAGTCTGTGGCTGGATTTTGGGATGAACATGTTGAGAAACC
AATCATTTCCATTAGAGATGAGCTTTTCGAGACATTCAAGCAAAGAGATAAAGGTGTAAT
GGAACAGCAAGAGGTCCAACTGACTGAAGATTCATTGCGCAGGATGTTAGTTGCCTTTTG
TGAGCAAACAGAGGGTCGGAAGTTGCCAGAAGATTTAGCAGTGCAGGCGATGTTGGAGAC
TCTCACGAAGAGATATGAGAAGGAATTGATACATCCAATTCAAAACCTCTTCAGTGGAGA
ATTAGCCCGTGCTATGCTTATTCAGATTCAAAAGCTTAAACTGGATCTTGAATCGGGACT
GCTGGAGATGGATCAGATTCTTAGGGCAAATGCTATAAACTTTGCCGTTCTTGCAGCTCT
GCCTGCTTTTGGTCTCTCACTTCTGCTGCTTGTGTTACTGCGAACATGGATTCAGCGTGA
TCATGGTGCTGAGGGAAGAGGTAATATTGCACGATGTCAACGGAGGCTGCTTCTTGTTGA
TGTAGAGAGAAGGCTTATGGAGTTTCAGCATTACAGGGATAATGGAATGGAGGAAGAGGC
ACGGTGCAAGTTTGGACTAGTACTTTACACGCTTGATAGACTGTGCAAAGCTGTTGAGTC
ACACGCAAAAGAAACAGGCGAATGGTTAAGCTTGAGAGAAGACATTTTTGATCTGGCAAA
GCTCGACATGGGAACGCCAGACAAGATGATTGTCGTGTCACGGTTGAAGTGGATGTATAA
CTGCTTGCTTCCATTCTCATCGAGCCGTTTGCCACGTCTCTAGAGCAGCGAGCAACTGAA
CGTCGTGTGTTGCATTTTGGATACTCCATTTCTGCGGTAACTTGTAAAGATTTTGGCACG
GGTACCTGGCTCTGGAAGGTTCGTTGGCCCTCTGTCGGAAGGATGGTTCTTTCATGCACA
CAAAGATGTTTTGTAAATTTTATCAGAGCTGGATAAAGTACATCGGAAAGGGCAAAAATT
GGGTGGATACAGTATCCACCGAGCCCTCCGTGCATACAGCCAGGGTAGTAGGGGATAGAA
AGAGGACGCCAGTTTGCCTTGTTGATTTGGATTGGCTGTTTATACCAAAATAGTTTGCGT
GGTTGGGCTATTTGTGTGCGAGCATTGTACCTTTTGGCCTTTGTTCCAGCCTATCATTTG
CAATGGCTATTCCATACCCCCATACTTCATAACAAGATGCTGTTCTTTTTTTTCTATTCC
GCAGAAATAAAGGAGATGTGCAGTACA