Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER94825
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:65332794:65339108:-1 gene:SORBI_3001G364400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGACGGAACTAGTAGTCTCTTTCATGGGCGTCGTGCTCGCCACCGCTCTTCTCGTC
GTCACCGTCCTCCGCCGCAAGCGCTGCTCCAGCTCCAGCTCCAGCCGCGAGTACAGGCTC
CCACCCGGCCCTCGCCCGTGGCCGGTGATCGGCAACCTCAACCTGCTCGGCTCGCTCCCG
CACCGCTCCATCCACGCGCTCTCGGCGCGGCACGGCCCGTTCATGTCGCTCCGCTTCGGC
TCCGTCCCCGTCGTCGTCGGCTCGTCGGTGGACGCCGCCAGGTTCTTCCTCAAGACCAAC
GACGCGTCCTTCATCGACCGCCCCAAGATGGCGTCCGGGAAGCACACCGCCTACGACTAC
TCCGACATCGTCTGGTCCCCCTACGGCGCCTACTGGCGCCAGGCGCGCAAGCTGTGGAAG
GCCAACCTCTTCAACGACAGGCAGCTCAGGTCGCTGGAGCACGTCCGCAGCGAGGAGCTG
CGCGTGCTCCTGCGCGACCTGCGCGCCCTGTCCCTGTCCTCCTCCTCCTCCGCGTCCGCC
GGGCGCGGCGGGGGCGTCGTCGCGCTCAAGGAGCACCTGCTCATGCTGAGCCTCAACGTG
ATCTCGCGCATGGCGCTGGGCGGGAAATACGTCGGCGAGGGCGGCACCGCTGGCTCGCCG
ATCTCGCCGGCCGAGTTCAGGTGGATGGTCGACGAGCTGTTTCTCCTCAACGGCGTGTTC
TGCGTCGGGGACTTCATCCCCTGGCTCAGCTGGCTGGACATTCATGGCTACGTCGGGAGG
ATGAAGAAGCTGGGCAAGATGTTCGATCGCTTCTTGGAGCACATGGTGGAGGAGCACAGC
CAGCGACGGCGGCGAGAAGGCGATAAGTTCGTTGCCGCGGACATGGTGGACCTGCTGCTG
GAGCTCGCCGACGACCCCAAACTTGAGGTGCCCATCAAACGGGATGGCGTCAAGGGATTC
GCTCTGGACCTCATCGCTGGCGGCACGGACTCCTCGGCGGTGACCATCGAATGGGCCATG
TCGGAGCTCCTGCGGAATCCCGATGTGCTCTCCAAGGCCACCGAGGAGCTGGACGGCGTC
GTCGGCCGCGAACGCCTTGTCACCGAGCAGGACATTCCGAACCTGCCGTACCTGGAGGCC
ATCGTGAAGGAGGCCTTCCGCCTGCACCCCGTGACGCCGCTGCTGGCGCCGCGGCTGTGC
CGCGAGGACGCTTCCACGGGCAGCTACGACATCCCACGGGGCACGCTCGTGTTCGTGAAC
GTCTGGACCATCGGCCGCGACCCCGCCGTGTGGGGCGACGACGCGGAGTTCTTCCGCCCG
GAGAGGTTCGTCGGCAGCGGCGTGGACGTGAAGGGGCAGGACCTGGAGCTGCTCCCGTTC
GGGTCCGGCCGCCGAATGTGCCCGGGCTACGTCCTCGGGCTCAAGATGGTGCAGGTGACC
CTGGCCAACCTGCTGCACGCCTTCGCGTGGCGGCTGCCGGATGGCGTGGCCCCGGAGAAG
CTGAGCATGCAGGAGAAATTCGGCCTGGCCGTTCCGCGCTTCGTCCCTCTCGAGGCCGTC
GCCGTGCCCAGGCTGCCTGCACACCTCTACGCCTGA

Peptide Sequence

PEP ID

EER94825
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:65332794:65339108:-1 gene:SORBI_3001G364400 transcript:EER94825 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

METELVVSFMGVVLATALLVVTVLRRKRCSSSSSSREYRLPPGPRPWPVIGNLNLLGSLP
HRSIHALSARHGPFMSLRFGSVPVVVGSSVDAARFFLKTNDASFIDRPKMASGKHTAYDY
SDIVWSPYGAYWRQARKLWKANLFNDRQLRSLEHVRSEELRVLLRDLRALSLSSSSSASA
GRGGGVVALKEHLLMLSLNVISRMALGGKYVGEGGTAGSPISPAEFRWMVDELFLLNGVF
CVGDFIPWLSWLDIHGYVGRMKKLGKMFDRFLEHMVEEHSQRRRREGDKFVAADMVDLLL
ELADDPKLEVPIKRDGVKGFALDLIAGGTDSSAVTIEWAMSELLRNPDVLSKATEELDGV
VGRERLVTEQDIPNLPYLEAIVKEAFRLHPVTPLLAPRLCREDASTGSYDIPRGTLVFVN
VWTIGRDPAVWGDDAEFFRPERFVGSGVDVKGQDLELLPFGSGRRMCPGYVLGLKMVQVT
LANLLHAFAWRLPDGVAPEKLSMQEKFGLAVPRFVPLEAVAVPRLPAHLYA

Transcript Sequence

Transcript ID

EER94825
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:65332794:65339108:-1 gene:SORBI_3001G364400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCACCTGAACCGCGGTGCGCCCGCCTCGTTCTTGAACGCACACAACAGAAGAAAAGAATA
AGCACATCGCAGCTACTACGTTCCGATGGAGACGGAACTAGTAGTCTCTTTCATGGGCGT
CGTGCTCGCCACCGCTCTTCTCGTCGTCACCGTCCTCCGCCGCAAGCGCTGCTCCAGCTC
CAGCTCCAGCCGCGAGTACAGGCTCCCACCCGGCCCTCGCCCGTGGCCGGTGATCGGCAA
CCTCAACCTGCTCGGCTCGCTCCCGCACCGCTCCATCCACGCGCTCTCGGCGCGGCACGG
CCCGTTCATGTCGCTCCGCTTCGGCTCCGTCCCCGTCGTCGTCGGCTCGTCGGTGGACGC
CGCCAGGTTCTTCCTCAAGACCAACGACGCGTCCTTCATCGACCGCCCCAAGATGGCGTC
CGGGAAGCACACCGCCTACGACTACTCCGACATCGTCTGGTCCCCCTACGGCGCCTACTG
GCGCCAGGCGCGCAAGCTGTGGAAGGCCAACCTCTTCAACGACAGGCAGCTCAGGTCGCT
GGAGCACGTCCGCAGCGAGGAGCTGCGCGTGCTCCTGCGCGACCTGCGCGCCCTGTCCCT
GTCCTCCTCCTCCTCCGCGTCCGCCGGGCGCGGCGGGGGCGTCGTCGCGCTCAAGGAGCA
CCTGCTCATGCTGAGCCTCAACGTGATCTCGCGCATGGCGCTGGGCGGGAAATACGTCGG
CGAGGGCGGCACCGCTGGCTCGCCGATCTCGCCGGCCGAGTTCAGGTGGATGGTCGACGA
GCTGTTTCTCCTCAACGGCGTGTTCTGCGTCGGGGACTTCATCCCCTGGCTCAGCTGGCT
GGACATTCATGGCTACGTCGGGAGGATGAAGAAGCTGGGCAAGATGTTCGATCGCTTCTT
GGAGCACATGGTGGAGGAGCACAGCCAGCGACGGCGGCGAGAAGGCGATAAGTTCGTTGC
CGCGGACATGGTGGACCTGCTGCTGGAGCTCGCCGACGACCCCAAACTTGAGGTGCCCAT
CAAACGGGATGGCGTCAAGGGATTCGCTCTGGACCTCATCGCTGGCGGCACGGACTCCTC
GGCGGTGACCATCGAATGGGCCATGTCGGAGCTCCTGCGGAATCCCGATGTGCTCTCCAA
GGCCACCGAGGAGCTGGACGGCGTCGTCGGCCGCGAACGCCTTGTCACCGAGCAGGACAT
TCCGAACCTGCCGTACCTGGAGGCCATCGTGAAGGAGGCCTTCCGCCTGCACCCCGTGAC
GCCGCTGCTGGCGCCGCGGCTGTGCCGCGAGGACGCTTCCACGGGCAGCTACGACATCCC
ACGGGGCACGCTCGTGTTCGTGAACGTCTGGACCATCGGCCGCGACCCCGCCGTGTGGGG
CGACGACGCGGAGTTCTTCCGCCCGGAGAGGTTCGTCGGCAGCGGCGTGGACGTGAAGGG
GCAGGACCTGGAGCTGCTCCCGTTCGGGTCCGGCCGCCGAATGTGCCCGGGCTACGTCCT
CGGGCTCAAGATGGTGCAGGTGACCCTGGCCAACCTGCTGCACGCCTTCGCGTGGCGGCT
GCCGGATGGCGTGGCCCCGGAGAAGCTGAGCATGCAGGAGAAATTCGGCCTGGCCGTTCC
GCGCTTCGTCCCTCTCGAGGCCGTCGCCGTGCCCAGGCTGCCTGCACACCTCTACGCCTG
AGGGACGTCGACGGGAAAATTCAGAAAAGGTGTGCTTGCCATGTGGAGTGCATAGAATTT
GAATTTAAAGGTGTGAATATAGTAAAAATTTAACTATAATCTTTGTTTTTTTTTATTTTT
GCGTAGGTGCAGCTGCACCCACTATCTACTATATACAATCACCCATAGACGTCAATCTGC
CTCGTGATCGGCACCACACCGAAGCTAGACCAAGAGGAGGTTGCTTGTCTTATGGGTGCA
TACGTATAGTATTGGTAGATTTTAGTTATGTTTTATTTTTACCTATTTACTTGGCTGATA
AGCTATGGTGCAGCTTATATATTCGGATCAGGTAGACTTTTGTTAGATTTCATAACAAAC
GGTATGTATATATACATAAGAAAAATCATCTATCGTAGACTGTTTGGCCCCACCATCTTT
GCTCCTCACCTCCTATTTTCTTAAAAAAATCAATTAAACCTTGAATTGTTACTTCTATCG
TATCCGCACATGCCTCTGTATGGCCTAGTAACTTATATAGTTTTATACATATTAAATATT
AATATTTTAGATGGTTATATATTGTAATTTTTTACTGTACCTAGGTTTGCTATACTAATA