Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER94752
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:63976583:63979207:-1 gene:SORBI_3001G349900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTCTGGCTGTAGTTCTTGATGGATTCGCCGACGGCTTGCCGGCGGTGAAGGCTGCT
CTGGCGCTGTTCCTCCCTCTCCTACTCTTCATTGTGCTGCGCCACTTCAGTGATGCCGCA
AGAAGCAATAGCAACCGAGAACACAAGAGGACGCCTCCTTCCCCTTCAGCGATGCCGCTG
ATCGGGCACCTCCACCTCATCGCCGGTGGGCTCCCGCACGTCTCCCTGCGAGACCTCGCC
GCGCGGCAGCAGGGTGAGGGGGGCCTCATGCTGCTCCGCCTCGGAACGGTCCCGACGCTG
GTGGTCTCGTCCTCGCACGCCGCGCAGCAGATCCTGCGCACGCACGACGCGTCCTTCGCC
TCGCGGCCGGGGTCCGTCGTCGGCGACATACTCTCGTACGGGCCGTCGGACGTCGGGTTC
GCGCCCTACGGCGAGTGGTGGCGGCAGGGCAAGAAGCTGGTCACCACGCACCTGCTCTCC
GCGAAGAAGGTGCAGTCCAACCGCGCCGCCCGAGAGGAGGAGGTGGGCGCAGTGATAGCC
AGGACCCGTGGCGCGGCCGCGGCACACGCGCCTGTGGACATGAGCGAGCTCCTGAGCTCG
TTCACCAACGACATAATCTGCCGCGCGGTGGCAGGGAGGTCGTTCAGGGTGGAGGGCCGG
AACAAGGTGTTCCGTGAGCTGATCGATGTCGGGATGGCCGTCGTGGGGGGATTCAACCTC
GAGAACTTCTACCCTCGTCTGGCAAAGGTAGCCGGCGGCGTGCTCACGTGGCCAGCGCGC
CGGGGAGCAGAGAGGCTGAGGCGCCGGTGGGACGACATCCTTGACGCCCTCATCGACGAG
CACGCGAGAGAGATGGCAGGTGCAGATGGTCGCGGAGACCTGCAAGAGAGTGACTTCATA
CATGTGCTCTTGTCCGTACAAGAAGAGTATGGACTCACCAGAAACAGCATCAAGGGTATC
CTAGCTGATATGTTTACAGCGGGCACTGACACGGCATATCTGGTCCTAGAGTTTGCCATG
GCTGAGCTGATGCTGCATCAAGATGCTCTGGCCAAGCTACAAGCCGAGGTGAGGAAGACA
ATGCCTGACGGCCAGGAAACAATCAGTGAGGAAAACCTAGCTGGAATGACCTATCTAAAG
GCAGTCATCAAAGAGACACTCCGCCTCCATCCGCCATCGCCGCTCCTTGTTCCACATCTC
TCCCTGGAGGATTGTGATGTGGACAACTACACGGTTCCTGCTGGCACAACTGTGTTCATC
AACGCCTGGGCAATTGGGCGTGACCCGAGGATGTGGAATGCCCCAGAAGAGTTCATGCCA
GAGAGGTTCATAGACAGTAAGGGAGACATAACTGGTGCGGACTTCAGAGGAAACGACTTC
CAGTTTTTGCCGTTCGGGTCAGGGCGGAGGATATGCCCTGGGGTAAACTTTGCATTGGCT
TCCATTGAGATCATGTTGGCAAACCTTGTATACCACTTTGACTGGGAGCTGCCTGAAGAT
GTGCATAATATTGATATGACCGAGGTGTTCGGGTTGACAGTGCGCCGGAAAGAGAAGCTC
CTCCTCATCCCAAGGTTTCATCCTCCCAGTCCACAAGAGGAGTAG

Peptide Sequence

PEP ID

EER94752
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:63976583:63979207:-1 gene:SORBI_3001G349900 transcript:EER94752 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALAVVLDGFADGLPAVKAALALFLPLLLFIVLRHFSDAARSNSNREHKRTPPSPSAMPL
IGHLHLIAGGLPHVSLRDLAARQQGEGGLMLLRLGTVPTLVVSSSHAAQQILRTHDASFA
SRPGSVVGDILSYGPSDVGFAPYGEWWRQGKKLVTTHLLSAKKVQSNRAAREEEVGAVIA
RTRGAAAAHAPVDMSELLSSFTNDIICRAVAGRSFRVEGRNKVFRELIDVGMAVVGGFNL
ENFYPRLAKVAGGVLTWPARRGAERLRRRWDDILDALIDEHAREMAGADGRGDLQESDFI
HVLLSVQEEYGLTRNSIKGILADMFTAGTDTAYLVLEFAMAELMLHQDALAKLQAEVRKT
MPDGQETISEENLAGMTYLKAVIKETLRLHPPSPLLVPHLSLEDCDVDNYTVPAGTTVFI
NAWAIGRDPRMWNAPEEFMPERFIDSKGDITGADFRGNDFQFLPFGSGRRICPGVNFALA
SIEIMLANLVYHFDWELPEDVHNIDMTEVFGLTVRRKEKLLLIPRFHPPSPQEE

Transcript Sequence

Transcript ID

EER94752
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:63976583:63979207:-1 gene:SORBI_3001G349900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCTATCTAGGATGGATCTATTTTTTTTCCCTGGTGCTTTGACAATGTGATCACTGCTAGC
AGTATATATGGATTTGTACCTGTACCTTAGACCAAATGCTACTCTGTCCTTTTTTTTTTA
CTTGAAGCAGTAAATCTACTGTGCTGGTGATGTCAGCGCCAACAATGATTTGTAGCATGA
AGCCCATTGAGGGCTCTGCAATAACAATAGCCACTTGGAAGAGCAGGAGCAGTTTATAAG
GAGAGAACAGAGTAGAAAAGCATCCCAAGGTCCCATTATAGAACAAAAAGAGTAGGTGAG
CACAGGACAAGTAAATCCCTCTGTCTGCAGCAAGAAGTGACACAACGATTTGTTGTTTCC
CTTCATTGTCATGTTACTGTAAAATAACAAATTAACAACCTTATTTTGTTATCCTCTTTG
TCAAAAAAAAACCTTATTTTGTTATCCACTGGTGCTCTAGAGCTGTTTAGGTGTTGTCTT
ATTGTAGACCACCTTATTCTGTGTTATCACCTAGGGAACCCACTGCTGGCGCCGAAGACT
TTTGGTAGGCTAGGGAAGGGGCAATGGCTCTGGCTGTAGTTCTTGATGGATTCGCCGACG
GCTTGCCGGCGGTGAAGGCTGCTCTGGCGCTGTTCCTCCCTCTCCTACTCTTCATTGTGC
TGCGCCACTTCAGTGATGCCGCAAGAAGCAATAGCAACCGAGAACACAAGAGGACGCCTC
CTTCCCCTTCAGCGATGCCGCTGATCGGGCACCTCCACCTCATCGCCGGTGGGCTCCCGC
ACGTCTCCCTGCGAGACCTCGCCGCGCGGCAGCAGGGTGAGGGGGGCCTCATGCTGCTCC
GCCTCGGAACGGTCCCGACGCTGGTGGTCTCGTCCTCGCACGCCGCGCAGCAGATCCTGC
GCACGCACGACGCGTCCTTCGCCTCGCGGCCGGGGTCCGTCGTCGGCGACATACTCTCGT
ACGGGCCGTCGGACGTCGGGTTCGCGCCCTACGGCGAGTGGTGGCGGCAGGGCAAGAAGC
TGGTCACCACGCACCTGCTCTCCGCGAAGAAGGTGCAGTCCAACCGCGCCGCCCGAGAGG
AGGAGGTGGGCGCAGTGATAGCCAGGACCCGTGGCGCGGCCGCGGCACACGCGCCTGTGG
ACATGAGCGAGCTCCTGAGCTCGTTCACCAACGACATAATCTGCCGCGCGGTGGCAGGGA
GGTCGTTCAGGGTGGAGGGCCGGAACAAGGTGTTCCGTGAGCTGATCGATGTCGGGATGG
CCGTCGTGGGGGGATTCAACCTCGAGAACTTCTACCCTCGTCTGGCAAAGGTAGCCGGCG
GCGTGCTCACGTGGCCAGCGCGCCGGGGAGCAGAGAGGCTGAGGCGCCGGTGGGACGACA
TCCTTGACGCCCTCATCGACGAGCACGCGAGAGAGATGGCAGGTGCAGATGGTCGCGGAG
ACCTGCAAGAGAGTGACTTCATACATGTGCTCTTGTCCGTACAAGAAGAGTATGGACTCA
CCAGAAACAGCATCAAGGGTATCCTAGCTGATATGTTTACAGCGGGCACTGACACGGCAT
ATCTGGTCCTAGAGTTTGCCATGGCTGAGCTGATGCTGCATCAAGATGCTCTGGCCAAGC
TACAAGCCGAGGTGAGGAAGACAATGCCTGACGGCCAGGAAACAATCAGTGAGGAAAACC
TAGCTGGAATGACCTATCTAAAGGCAGTCATCAAAGAGACACTCCGCCTCCATCCGCCAT
CGCCGCTCCTTGTTCCACATCTCTCCCTGGAGGATTGTGATGTGGACAACTACACGGTTC
CTGCTGGCACAACTGTGTTCATCAACGCCTGGGCAATTGGGCGTGACCCGAGGATGTGGA
ATGCCCCAGAAGAGTTCATGCCAGAGAGGTTCATAGACAGTAAGGGAGACATAACTGGTG
CGGACTTCAGAGGAAACGACTTCCAGTTTTTGCCGTTCGGGTCAGGGCGGAGGATATGCC
CTGGGGTAAACTTTGCATTGGCTTCCATTGAGATCATGTTGGCAAACCTTGTATACCACT
TTGACTGGGAGCTGCCTGAAGATGTGCATAATATTGATATGACCGAGGTGTTCGGGTTGA
CAGTGCGCCGGAAAGAGAAGCTCCTCCTCATCCCAAGGTTTCATCCTCCCAGTCCACAAG
AGGAGTAGATCACCTGGTGGAGAGTAGCACATGTACATCTTTTTTATTCTTCAGCTAAAG
CTGTAGTAGCCTGTATGAGTATTAGTATATATAATTACTCTAGCAACCGCCCTCTGCTAT
TCATGCCTGAGTATGGAACTCCAAAACTGATATTGGAGAAGGCTAGAGTGTACCCTCTCC
GTGTAACAGCCCTGTAAATAAAGGAAGGGGCTGTCCAAGATAGTCATCCGGTCAACCTTT
CACCC