Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER94580
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:60024223:60028947:-1 gene:SORBI_3001G313100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGAAATCAATGCCAAAATGGAACCTATGGGAGCAATTACAACAACTACAACCACTTT
CAGAAGGGGCCTTTGGCTTCTAGGTACTATGATGGGGACGATTCTGAGGATTGCTGCTCA
GGGCCATCTAGATCGAGTGTAGCAGATCTTATGCGGCAAGGACTGAGACGAACCTTAACA
TCCATCTCTGTCCTTGGTCGAAAGACTCCTAATGTAACAGAGCATTATACTCTGGGCCGG
CAGCTTGGAGAGGGTCTCACTGGGACAACCTACCTCTGCACTGAGATCAGCACTGGTTGT
CAGTATGCATGCAAGTCCATCTTGAAGGCAAAGTTCCGGAACATGCAAGATATTGAAGAT
GTGCGTCGTGAGATCCAGATAATGCACTACCTTTCAGGCCAAAAGCATACAGTCACCATC
AAGGATGTGTATGAGGATGAGGAGGCCGTGCACATTGTCATGGAGCTCTGTGAAGGTGGT
GAGCTATATGACCGGATTAAGAAGGAGAATTACAGTGAGCAGAAGGCTGCAGATCTTATC
AGAATTATTGTTGGCATCATAGAGAACTTCCATTCACTTGGTGTGATGCACCGGGATCTC
AAGCCAGAAAACTTCCTCTTACAGGATAAAGACAATGATTTGTCAATAAAAGTAATTGAC
TTTGGTCTCTCTGTGTTCTTCAAACCAGGTGAGGTTTTCACTGAAACAGTTGGAAGCCCG
TATTATATTGCTCCAGAGGTATTGCAGAAGCATTATGGACCGGAGGCTGATGTATGGACA
GCTGGAGTGATACTCTATGTATTGCTAAGTGGCGTGCCACCTTTTTGGGCAGATACACAT
GAAGGAGTACTTGACAAAGTGTGGGATGGGCATTTTGATTTTGAATCAGACCAGTGGCAC
AGGATTTCGGACAGTGCAAAGGATCTTATAAGAAAAATGCTCTGCCCTTGTCCATCGGAG
AGATTGAAAGCCCATGAAGTTCTAAAGCATCCCTGGATATGTGATAATGGAGCGGCTACT
CATCAAACTCTAGATCCAACTATTCTTTCTCACATCGACAAGTTATATGCAGAGAATAGA
TCAAAGAAATTGGTTCTACAGGTTATTGCTAAGCATCTTTCAGAAGAGGAGATTGCTAGG
TTAAGAGGAATGTTCAAGGCAATGGACAATGGAAACAGTGGTGCAATTACTTTGGCTGAG
CTTAAAGAAGGGTTGAGGAAATCTGGTTCAGTGTTTAGAAATATTGGGATTAGTGATATC
ATGGAAGCGGATGATTATGACAACAACATCAATATCAATTGGGAAGAGTTTATTGCTGCA
ACAGTGCCCCTAAGTAAAACAGAGCACAAAGAACATTTGATGGAAGACTTTACATATTTC
GACAAAGATGGAAGTGGTTATATCACTGTTAACGAGCCTCAAAAGGCTTCCATGGAACAA
AAGTTGGAAGATACTTTCCTTGAGGACCTCATTTATGAGGTTGATCAAAACAATGATGGC
CGGGCCAACTATGGTGAGTTCGTCACAATGATGCAAAGCGATAACTCTGGACTTGGGTGG
CAAACAATAGAAAGCAGCATGAATGTACCCCTGAGGGAGGCACCTGAAGTTTACTGA

Peptide Sequence

PEP ID

EER94580
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:60024223:60028947:-1 gene:SORBI_3001G313100 transcript:EER94580 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGNQCQNGTYGSNYNNYNHFQKGPLASRYYDGDDSEDCCSGPSRSSVADLMRQGLRRTLT
SISVLGRKTPNVTEHYTLGRQLGEGLTGTTYLCTEISTGCQYACKSILKAKFRNMQDIED
VRREIQIMHYLSGQKHTVTIKDVYEDEEAVHIVMELCEGGELYDRIKKENYSEQKAADLI
RIIVGIIENFHSLGVMHRDLKPENFLLQDKDNDLSIKVIDFGLSVFFKPGEVFTETVGSP
YYIAPEVLQKHYGPEADVWTAGVILYVLLSGVPPFWADTHEGVLDKVWDGHFDFESDQWH
RISDSAKDLIRKMLCPCPSERLKAHEVLKHPWICDNGAATHQTLDPTILSHIDKLYAENR
SKKLVLQVIAKHLSEEEIARLRGMFKAMDNGNSGAITLAELKEGLRKSGSVFRNIGISDI
MEADDYDNNININWEEFIAATVPLSKTEHKEHLMEDFTYFDKDGSGYITVNEPQKASMEQ
KLEDTFLEDLIYEVDQNNDGRANYGEFVTMMQSDNSGLGWQTIESSMNVPLREAPEVY

Transcript Sequence

Transcript ID

EER94580
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:60024223:60028947:-1 gene:SORBI_3001G313100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CATTTTTCTCCTCCTCTCGTTTTTGCGTTTAGGTCCCTGGGGAAGCAGGGATTCCCGGCG
CCGGTCCCTCTCCCCGGCTCTCCCGCCTCGCCGCTCCGATCGAGGCTGCAGCATCAGGTA
TTATCCTTCGGAGCCGCTTTCGGTCCTCATGGACTTGCATTTCACCTCGTTCACGCGCTG
TCGGTTTTAGATTTCATCTGCTTCAGTGAGGACTTTGAGTTAGAAACTAGAAGCGGTCGC
TGGGGAGTCGCCGCGGTCTCTAGGAGGCATTCCAGGGCAGGATTTGCTGGAAATCTTGGT
TCGCGGGGCGAATTTTGGTGCCAAGAACTCTTTAGGAGAAGATCCTAAATTTGGGTGGGG
GTTTAAGCTGTAGAGTACGGTGAAACTGATAAGGTTCGGCAGTTCGGCTATTGTTGCTCC
GAAAATCTCAGGGGAGCCGGAAATAGTAGGTAATAATAGTAGTATTTGTTTGTTTATATG
CAGTAATGTACTGTAGAAGTTTTTCTGTTGGCCGCTCCTTTTTATGCTAAATTTTGGCTC
TAAATTTACGGTGCAGTAGTTATTACTTGTAATTGTAATTAGGAATTCCGACCAGGTACA
GGTGTCGGGGTGAAAAAGATAGGCAGGAAGTAGGTTTTCTTGTTGTGATGTGATGCATAA
CTTCTTTATCACTGTAGCTATTTTATTTAAAAGTTGTATTTTTGCGTCTTGTAGTTGCAT
TAATGGGAAATCAATGCCAAAATGGAACCTATGGGAGCAATTACAACAACTACAACCACT
TTCAGAAGGGGCCTTTGGCTTCTAGGTACTATGATGGGGACGATTCTGAGGATTGCTGCT
CAGGGCCATCTAGATCGAGTGTAGCAGATCTTATGCGGCAAGGACTGAGACGAACCTTAA
CATCCATCTCTGTCCTTGGTCGAAAGACTCCTAATGTAACAGAGCATTATACTCTGGGCC
GGCAGCTTGGAGAGGGTCTCACTGGGACAACCTACCTCTGCACTGAGATCAGCACTGGTT
GTCAGTATGCATGCAAGTCCATCTTGAAGGCAAAGTTCCGGAACATGCAAGATATTGAAG
ATGTGCGTCGTGAGATCCAGATAATGCACTACCTTTCAGGCCAAAAGCATACAGTCACCA
TCAAGGATGTGTATGAGGATGAGGAGGCCGTGCACATTGTCATGGAGCTCTGTGAAGGTG
GTGAGCTATATGACCGGATTAAGAAGGAGAATTACAGTGAGCAGAAGGCTGCAGATCTTA
TCAGAATTATTGTTGGCATCATAGAGAACTTCCATTCACTTGGTGTGATGCACCGGGATC
TCAAGCCAGAAAACTTCCTCTTACAGGATAAAGACAATGATTTGTCAATAAAAGTAATTG
ACTTTGGTCTCTCTGTGTTCTTCAAACCAGGTGAGGTTTTCACTGAAACAGTTGGAAGCC
CGTATTATATTGCTCCAGAGGTATTGCAGAAGCATTATGGACCGGAGGCTGATGTATGGA
CAGCTGGAGTGATACTCTATGTATTGCTAAGTGGCGTGCCACCTTTTTGGGCAGATACAC
ATGAAGGAGTACTTGACAAAGTGTGGGATGGGCATTTTGATTTTGAATCAGACCAGTGGC
ACAGGATTTCGGACAGTGCAAAGGATCTTATAAGAAAAATGCTCTGCCCTTGTCCATCGG
AGAGATTGAAAGCCCATGAAGTTCTAAAGCATCCCTGGATATGTGATAATGGAGCGGCTA
CTCATCAAACTCTAGATCCAACTATTCTTTCTCACATCGACAAGTTATATGCAGAGAATA
GATCAAAGAAATTGGTTCTACAGGTTATTGCTAAGCATCTTTCAGAAGAGGAGATTGCTA
GGTTAAGAGGAATGTTCAAGGCAATGGACAATGGAAACAGTGGTGCAATTACTTTGGCTG
AGCTTAAAGAAGGGTTGAGGAAATCTGGTTCAGTGTTTAGAAATATTGGGATTAGTGATA
TCATGGAAGCGGATGATTATGACAACAACATCAATATCAATTGGGAAGAGTTTATTGCTG
CAACAGTGCCCCTAAGTAAAACAGAGCACAAAGAACATTTGATGGAAGACTTTACATATT
TCGACAAAGATGGAAGTGGTTATATCACTGTTAACGAGCCTCAAAAGGCTTCCATGGAAC
AAAAGTTGGAAGATACTTTCCTTGAGGACCTCATTTATGAGGTTGATCAAAACAATGATG
GCCGGGCCAACTATGGTGAGTTCGTCACAATGATGCAAAGCGATAACTCTGGACTTGGGT
GGCAAACAATAGAAAGCAGCATGAATGTACCCCTGAGGGAGGCACCTGAAGTTTACTGAT
GTCTCTGTCGGTGCAAAGATACTGTTCTCTTTGTCTCCTTGTGTGGTTTGGTTCCTCACA
AGTCACAACCATCTGGCATTTTGGCAAAGCTTGTGAATCGAGGAGAAGAGAATGTAGTCG
AAAGCTAGTAGAAGGCTGGCTACCTTATAGCATGCAGGTAGTATATGTGTGTTGTATGAT
CTATAAGAACAAACAAAGCCGTGTGGTCATCAGATATGTATCAGTAACTGGTTTGTTGGT
TGGTTGCTACCGGCCCTGCAGTCTAATATATAGGAGTAATAGATTAA