Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER94457
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:56765493:56770487:-1 gene:SORBI_3001G290600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCGCGGCAGAGATCGGTGGTTTCACAGCGGCGAGAGTGGCGGCGGCGGCGGCG
CTCAGGCCGGCTGCGCACCCAGCCCCGGCGGCGGCGGCGCCACCGCAGCCCAGGAGGGCT
GTGGCGGCGCAGTCGCTGCGGACGACCACCGCCGAGGTGCTGACGGCGGATCTCGCCGGC
ACGACCAACGGCGCGGTGCACGCTCAGATGAATAGTGAGGCTACTAGTGAAATCACTTCA
CAGGCAGTTATTTCTAGGAGGAAGACAAAGATAGTCTGCACCATAGGTCCCTCAACCAAC
ACTCGTGAGATGATTTGGAAGCTTGCAGAGACTGGAATGAATGTAGCACGCCTTAATATG
TCCCATGGTGACCACCAGTCACACCAGAAGGTTATTGATTTGGTCAAGGAGTACAACACA
CAGAACACTGATGGCAATGTTATTGCCATCATGCTGGACACTAAGGGTCCTGAAGTTAGA
AGTGGGGATGTTCCAGAGCCAATCATGCTCAAGGAAGGTCAAGAGTTCAACTTCACGATT
AAAAGAGGGGTGAGCACTGAAGACACTGTCAGTGTGAACTATGATGACTTCATAAATGAT
GTTGAAGCTGGTGACATACTGTTAGTGGATGGAGGAATGATGTCGCTTGCTGTGAAGTCT
AAAACAGCCGATACAGTCAAGTGTGAAGTAGTTGACGGTGGGGAATTGAAATCAAGGCGC
CACCTAAATGTCCGTGGAAAGAGTGCTACTTTGCCATCTATCACTGAGAAGGATTGGGAA
GACATAAAATTTGGTGTCGAAAACGGTGTTGATTTCTATGCAGTTTCCTTTGTGAAGGAT
GCCAAAGTTATTCATGAATTAAAGGACTACCTTAAAGGTGCTAATGCGGATATACATGTC
ATTCCAAAAATTGAAAGTGCAGATTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCA
GATGGGGCAATGGTAGCACGTGGAGACCTTGGTGCTGAACTTCCCATTGAGGACGTTCCT
TTGCTACAGGCAGAGATTGTTCAAACATGTCGAAGCATGGAGAAACCAGTCATTGTCGCT
ACAAATATGTTGGAAAGCATGATTGACCATCCTACTCCAACTAGGGCAGAGGTTTCTGAC
ATAGCTATTGCAGTCCGGGAAGGTGCTGATGCCATCATGTTATCTGGCGAAACTGCTCAT
GGAAAGTACCCACTAAAGGCAGTCAAGGTGATGCACACTGTGGCACTCAGAACAGAATCC
AGCCTTTATAACCCAACTACTTCCCCTAGTCTTGTTGCATCTGCACAGGGTCTACAGAAT
GAGGAGTTTTCCCCAAGCCAGCTAAGTAAAATGTTTGGATCTCATGCAACGATGATGGCA
AACACCCTTCGCACACCAATCATTGTATTTACACAGACCGGCTCCATGGCTGTCCTCCTG
AGCCACTATCGGCCCTCGTCTACACTATTTGCATTTACAAACGAGGAACGAGTGAAGCAA
CGGCTGGCACTCTACCAGGGGGTCATCCCTATTCACATGCAGTTCTCTGACGACGCAGAA
GAAACTTTCTCCAGAGCAATTAGCAGCTTGCTGAAAGCACAATATGTGAAGAAGGGAGAC
TACGTCACTCTTGTTCAGAGCGGAGTGACTTCCATCTGGAGAGAGGAATCTACTCACCAC
ATCCAAGTGAGGAAAGTTCAGGTCTGA

Peptide Sequence

PEP ID

EER94457
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:56765493:56770487:-1 gene:SORBI_3001G290600 transcript:EER94457 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAAAEIGGFTAARVAAAAALRPAAHPAPAAAAPPQPRRAVAAQSLRTTTAEVLTADLAG
TTNGAVHAQMNSEATSEITSQAVISRRKTKIVCTIGPSTNTREMIWKLAETGMNVARLNM
SHGDHQSHQKVIDLVKEYNTQNTDGNVIAIMLDTKGPEVRSGDVPEPIMLKEGQEFNFTI
KRGVSTEDTVSVNYDDFINDVEAGDILLVDGGMMSLAVKSKTADTVKCEVVDGGELKSRR
HLNVRGKSATLPSITEKDWEDIKFGVENGVDFYAVSFVKDAKVIHELKDYLKGANADIHV
IPKIESADSIPNLQSIIAASDGAMVARGDLGAELPIEDVPLLQAEIVQTCRSMEKPVIVA
TNMLESMIDHPTPTRAEVSDIAIAVREGADAIMLSGETAHGKYPLKAVKVMHTVALRTES
SLYNPTTSPSLVASAQGLQNEEFSPSQLSKMFGSHATMMANTLRTPIIVFTQTGSMAVLL
SHYRPSSTLFAFTNEERVKQRLALYQGVIPIHMQFSDDAEETFSRAISSLLKAQYVKKGD
YVTLVQSGVTSIWREESTHHIQVRKVQV

Transcript Sequence

Transcript ID

EER94457
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:56765493:56770487:-1 gene:SORBI_3001G290600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAGCGGCGCACCGGTTCGTGCCAGCTAGCAGGGCCTTCCCAAGCTCCGCTTCTCTCGGGC
GTTGGAACCGAGGATTGGAGGCATCGTGCAGACCGCGCCCGGGACACCTGGCACGTGGGC
CCGCCTCCTCCATCTCCCTCTGCGGCGTATAAAGAACCGGCCCACGGCCACCGCCACGCC
CTCGCCGGAATATCATACGAAAACCCTCGCGGCGACCGCTCTCCCACACACGCGCGCCGC
AGCCTCCGCAGTCCGCACCTGCCTCCACGACTTGTCGTGCTCGTGCGCTACTCTCCTCGA
GTGCGGCGCGGAGCACGGGGGCATCAAATGGCGGCCGCGGCAGAGATCGGTGGTTTCACA
GCGGCGAGAGTGGCGGCGGCGGCGGCGCTCAGGCCGGCTGCGCACCCAGCCCCGGCGGCG
GCGGCGCCACCGCAGCCCAGGAGGGCTGTGGCGGCGCAGTCGCTGCGGACGACCACCGCC
GAGGTGCTGACGGCGGATCTCGCCGGCACGACCAACGGCGCGGTGCACGCTCAGATGAAT
AGTGAGGCTACTAGTGAAATCACTTCACAGGCAGTTATTTCTAGGAGGAAGACAAAGATA
GTCTGCACCATAGGTCCCTCAACCAACACTCGTGAGATGATTTGGAAGCTTGCAGAGACT
GGAATGAATGTAGCACGCCTTAATATGTCCCATGGTGACCACCAGTCACACCAGAAGGTT
ATTGATTTGGTCAAGGAGTACAACACACAGAACACTGATGGCAATGTTATTGCCATCATG
CTGGACACTAAGGGTCCTGAAGTTAGAAGTGGGGATGTTCCAGAGCCAATCATGCTCAAG
GAAGGTCAAGAGTTCAACTTCACGATTAAAAGAGGGGTGAGCACTGAAGACACTGTCAGT
GTGAACTATGATGACTTCATAAATGATGTTGAAGCTGGTGACATACTGTTAGTGGATGGA
GGAATGATGTCGCTTGCTGTGAAGTCTAAAACAGCCGATACAGTCAAGTGTGAAGTAGTT
GACGGTGGGGAATTGAAATCAAGGCGCCACCTAAATGTCCGTGGAAAGAGTGCTACTTTG
CCATCTATCACTGAGAAGGATTGGGAAGACATAAAATTTGGTGTCGAAAACGGTGTTGAT
TTCTATGCAGTTTCCTTTGTGAAGGATGCCAAAGTTATTCATGAATTAAAGGACTACCTT
AAAGGTGCTAATGCGGATATACATGTCATTCCAAAAATTGAAAGTGCAGATTCAATACCA
AATCTGCAGTCCATTATTGCTGCTTCAGATGGGGCAATGGTAGCACGTGGAGACCTTGGT
GCTGAACTTCCCATTGAGGACGTTCCTTTGCTACAGGCAGAGATTGTTCAAACATGTCGA
AGCATGGAGAAACCAGTCATTGTCGCTACAAATATGTTGGAAAGCATGATTGACCATCCT
ACTCCAACTAGGGCAGAGGTTTCTGACATAGCTATTGCAGTCCGGGAAGGTGCTGATGCC
ATCATGTTATCTGGCGAAACTGCTCATGGAAAGTACCCACTAAAGGCAGTCAAGGTGATG
CACACTGTGGCACTCAGAACAGAATCCAGCCTTTATAACCCAACTACTTCCCCTAGTCTT
GTTGCATCTGCACAGGGTCTACAGAATGAGGAGTTTTCCCCAAGCCAGCTAAGTAAAATG
TTTGGATCTCATGCAACGATGATGGCAAACACCCTTCGCACACCAATCATTGTATTTACA
CAGACCGGCTCCATGGCTGTCCTCCTGAGCCACTATCGGCCCTCGTCTACACTATTTGCA
TTTACAAACGAGGAACGAGTGAAGCAACGGCTGGCACTCTACCAGGGGGTCATCCCTATT
CACATGCAGTTCTCTGACGACGCAGAAGAAACTTTCTCCAGAGCAATTAGCAGCTTGCTG
AAAGCACAATATGTGAAGAAGGGAGACTACGTCACTCTTGTTCAGAGCGGAGTGACTTCC
ATCTGGAGAGAGGAATCTACTCACCACATCCAAGTGAGGAAAGTTCAGGTCTGATGTGCC
GGTGGGAATTGGTCGTCGGAGAAATTTTGATGGCGCCGCTAGAAGTGTTATCATCATCAA
ATGCGAGTAATTTTAATGTTTTACCAGGAGATTGCCACGTCGAGTTATATGTTGTGTCGA
ATTCACGTGTAGACTCTGAATCTTTAACTCTGTATTCGTTCATTTTCACTTGTTGTTTCA
CACTGGAGTTTTACAAGTTCACCTTTACTGCTCTTGCTTTCTTGTGAA