Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER94286
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:29400680:29403830:-1 gene:SORBI_3001G255600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCCTCCCCCTCCCGCGCCCCGCCGACGCCTCCGGCCGCCTCGGAGTGGCGCTGCGTC
CGGTGCACGTTCCTCAACACTGAATACTTCGACTCCTGCGAGTTGTGCCAGGCCTCGCGC
CCAGTTGAGGTCGACATCGACAGCCCCGTCGCCGTGGGCGCCGCCTTCGCGTTGGCCTCG
TCCAAGCGGAGCCGGAGGAAGGAGGACCGCAGTGCGTCTACCCCACCCCAGCGGTTTGGG
AGGAAGAGGGAGCGCGATGCGTCGCCGGATGTGGTTGAACTTTGCGATAGTGCGGACAAG
GGGCCCGCCGCCAAGAAAGGAAACCTTGAGATTTGTTTGGATAAGACGACCTTCAAAATC
ATGACATACAATGTCTGGTTCCGAGAGGATGTGGAAGTGATAAGAAGGATGGATGCTCTT
GGGGATCTTATAAAGCAGCATAGCCCAGACTTTATATGCTTCCAGGAGATTACACCATAC
ATATATATGCTTCTGCAAAAATCTGACTGGTGGCAACAATACAAGTGCTTGTTGTCACAT
GAGAAGGCTATTCAGATGCCGTATTACTGCATGCAGTTGAGCAAACTGCCAGTGAAGGCA
TCTGACTGCACCCCATTTTTGAACTCAATAATGGGAAGAGAGCTGTGCTTCACAAGTGTT
AGCACAGGAGAGATGAAAAAGTTAATGATAGGCACAACCCACCTCGAGAGCCCATGCCCT
GCACCTCCTAAGTGGGATCAGATGTACAGCAAAGAACGTGTGGATCAGGCAAAGCAATGC
CTTGAAATTCTGGGACGCTTCCCCAATGCCATACTCTGTGGGGACATGAACTGGGACGAC
AAAGGAGACGGCCCTTTCCCTCTGCAGGATGGGTGGACTGATGCTTGGGTTGAGCTCAAG
CCTGGAGAAGATGGCTGGACCTATGACACGAAGGCCAATGGCATGCTGTCAGGCAACCGC
AAGCTGCAGAAGCGAATGGACCGGTTTGTGTGCAAGCTGGCAGACTTCAAGATCGTCAGC
ATCGAGATGATCGGGAAGGAGGCAATACCGGGTGTCTCCTACTACAAGGAGACGAAGATT
CGGAAAGAGAGCCGAATGGTTGAGCTGCCTGTCTTTCCAAGCGACCACTTTGGGCTTGTT
TTGACCATCACCCAGCAGGAGAATGACAGCTTCTGA

Peptide Sequence

PEP ID

EER94286
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:29400680:29403830:-1 gene:SORBI_3001G255600 transcript:EER94286 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPSPSRAPPTPPAASEWRCVRCTFLNTEYFDSCELCQASRPVEVDIDSPVAVGAAFALAS
SKRSRRKEDRSASTPPQRFGRKRERDASPDVVELCDSADKGPAAKKGNLEICLDKTTFKI
MTYNVWFREDVEVIRRMDALGDLIKQHSPDFICFQEITPYIYMLLQKSDWWQQYKCLLSH
EKAIQMPYYCMQLSKLPVKASDCTPFLNSIMGRELCFTSVSTGEMKKLMIGTTHLESPCP
APPKWDQMYSKERVDQAKQCLEILGRFPNAILCGDMNWDDKGDGPFPLQDGWTDAWVELK
PGEDGWTYDTKANGMLSGNRKLQKRMDRFVCKLADFKIVSIEMIGKEAIPGVSYYKETKI
RKESRMVELPVFPSDHFGLVLTITQQENDSF

Transcript Sequence

Transcript ID

EER94286
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:29400680:29403830:-1 gene:SORBI_3001G255600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTAATATAATTCGGCCGCCGCCTCCGCTTCCGCCTCTTCCCGAGTTCTCCCCAAGCCCCG
ACCATGCCCTCCCCCTCCCGCGCCCCGCCGACGCCTCCGGCCGCCTCGGAGTGGCGCTGC
GTCCGGTGCACGTTCCTCAACACTGAATACTTCGACTCCTGCGAGTTGTGCCAGGCCTCG
CGCCCAGTTGAGGTCGACATCGACAGCCCCGTCGCCGTGGGCGCCGCCTTCGCGTTGGCC
TCGTCCAAGCGGAGCCGGAGGAAGGAGGACCGCAGTGCGTCTACCCCACCCCAGCGGTTT
GGGAGGAAGAGGGAGCGCGATGCGTCGCCGGATGTGGTTGAACTTTGCGATAGTGCGGAC
AAGGGGCCCGCCGCCAAGAAAGGAAACCTTGAGATTTGTTTGGATAAGACGACCTTCAAA
ATCATGACATACAATGTCTGGTTCCGAGAGGATGTGGAAGTGATAAGAAGGATGGATGCT
CTTGGGGATCTTATAAAGCAGCATAGCCCAGACTTTATATGCTTCCAGGAGATTACACCA
TACATATATATGCTTCTGCAAAAATCTGACTGGTGGCAACAATACAAGTGCTTGTTGTCA
CATGAGAAGGCTATTCAGATGCCGTATTACTGCATGCAGTTGAGCAAACTGCCAGTGAAG
GCATCTGACTGCACCCCATTTTTGAACTCAATAATGGGAAGAGAGCTGTGCTTCACAAGT
GTTAGCACAGGAGAGATGAAAAAGTTAATGATAGGCACAACCCACCTCGAGAGCCCATGC
CCTGCACCTCCTAAGTGGGATCAGATGTACAGCAAAGAACGTGTGGATCAGGCAAAGCAA
TGCCTTGAAATTCTGGGACGCTTCCCCAATGCCATACTCTGTGGGGACATGAACTGGGAC
GACAAAGGAGACGGCCCTTTCCCTCTGCAGGATGGGTGGACTGATGCTTGGGTTGAGCTC
AAGCCTGGAGAAGATGGCTGGACCTATGACACGAAGGCCAATGGCATGCTGTCAGGCAAC
CGCAAGCTGCAGAAGCGAATGGACCGGTTTGTGTGCAAGCTGGCAGACTTCAAGATCGTC
AGCATCGAGATGATCGGGAAGGAGGCAATACCGGGTGTCTCCTACTACAAGGAGACGAAG
ATTCGGAAAGAGAGCCGAATGGTTGAGCTGCCTGTCTTTCCAAGCGACCACTTTGGGCTT
GTTTTGACCATCACCCAGCAGGAGAATGACAGCTTCTGAACAACTGTTACAGTGACCCTG
AAGCATTTACTTTCGTTCTCTTTTGCATGATATTTAGAGAGCAGTTCTGCGCTTCCACTG
TTCTCATTTTAGTGATCGCCCCACGATTTTGTAAACTTTGGTGGAGGCATCAGTAGGCTA
GGACGTGCAAATGGTGGTTTTTTCTTACCAGGTGGCTACTTGTTGATTCTTGCTACTTCG
TTTCTCATCAATGTCTCATTGAGATGCTTGGGTTGGCTAAAAGATATGCCCTCTCGATGG
TCTT