Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER94178
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:24337515:24344462:-1 gene:SORBI_3001G237700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGTTCGACGAGTACGAGTACCTGGAGAAGGCAGTGGAGCCAGCTGCTCCGCCGGCC
AATGGCTCCGGCGAGAAGGACCGAGGATCGCGCCGCCGCGAGGGCGGCGAGGACCGCATA
TCGAAGCGTTCCCGCTCGGGGGAGGACCGCGACCGGGACCGGGACCGGCACCGCAGCGGC
CGGGAGCACCGCGACCGGGATAGGGATGACGGGAAGGAGAAGGAGAGGAGCCGCGACAGC
CGCGGGAAGGATAGGGACAGGGAAGGGAGAGAACGAGAGAAGGATAGGGGGGACAGACAC
CGGCTCAGGGAGAGGGAAGTGGAACGGGAGCGGAGGAGCCGGAGCCGCTCGGAGCGGCGC
CGTGCCGAGGAAGAGGAGATGGTGAGGGAGCTGGAGCGGGAGCGCGAGCGCAGCGAGCGA
CACCTCTTTCGCGGTGACGTCAGGCGTAGGAAAGATGATGGGGCAGAGCCAGAAGTTGAT
CCAGAAAGGGACCAGAGGACAGTATTTGCCTTCCAGCTATCTTTGAAGGCAGACGAAAGA
GATGTTTATGAGTTTTTCTCAAGGGCTGGGAAGGTTCGTGATGTTCGTCTTATCATGGAT
CGAAACTCAAGACGTTCTAAAGGAGTTGGGTACATTGAGTTTTACGACGTCATGTCTGTT
CCAATGGCAATTGCTCTGTCTGGTCAACCGCTGCTTGGACAAGCAGTGATGGTTAAGCCA
TCTGAGGCTGAAAAGAACTTGGTTCAGTCAAATGCGACTTCAGGTGGTGCGGCTTCAGGT
GGAGCAAGAAAATTGTATGTTGGCAATCTTCACTCAAATATTACTGAAGACCAATTGAGA
CAGGTATTTGAACCATTTGGGCAAGTGGAGCTTGTACAGCTTCCTCTAGATCCAATGACT
GGATTGTGCAAAGGTTATGGTTTTATTCAGTTTGCACGGCTTGAAGATGCAAAAGCTGCA
CAGAGCTTGAATGGGCAGCTTGATATTGCCGGCAGAGTTATTAAGGTTTCAGCTGTTACT
GATCATGTGGGAGTGCAGGCTAGTGGAGCAACTACTGGAGATTTAGATGATGATGAAGGT
GGAGGCTTGGCACTAAATGCAAGCTCCAGAGCTGCCCTTATGCTCAAATTGGACAGGAGT
GGTACTGCAACCAGCTTAACTGGTGGTATTGGTGCTGCTGGAGTGTCTTTACCAGCTACT
TCAGTTATTGGGGCTCCAGGAGCTGCTTCTCTTCTATCACCAACAGTTGCTGCTGTTGGA
TCAGTTCCTGGGGCACCTGTGCTTCCTGTTACCACTCAGAATGTGATCATGTCTACACCT
ACAGAATTCTTGTTGCTTAAAAACATGTTTGACCCAGCATTGGAGACGGATCCTGATTTT
GACTTGGATATTAGAGATGATGTCCAAGATGAATGTTCCAAGTTTGGTGCAGTGAAGCAT
ATTTTTGTTGACAAAAATACTGCAGGCTTTGTGTATCTGCAGTTCGATAGTGTGGCTGCA
GCAGGGAAGGCCCAACAAGCACTTCATGGAAGATGGTTTGCGGGAAAGATGATTACAGCA
ACATTTATGTCGGCTCAGGAGTACAGTACAAAGTTTCCAAACTTGTGA

Peptide Sequence

PEP ID

EER94178
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:24337515:24344462:-1 gene:SORBI_3001G237700 transcript:EER94178 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEFDEYEYLEKAVEPAAPPANGSGEKDRGSRRREGGEDRISKRSRSGEDRDRDRDRHRSG
REHRDRDRDDGKEKERSRDSRGKDRDREGREREKDRGDRHRLREREVERERRSRSRSERR
RAEEEEMVRELERERERSERHLFRGDVRRRKDDGAEPEVDPERDQRTVFAFQLSLKADER
DVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQAVMVKP
SEAEKNLVQSNATSGGAASGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPLDPMT
GLCKGYGFIQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDHVGVQASGATTGDLDDDEG
GGLALNASSRAALMLKLDRSGTATSLTGGIGAAGVSLPATSVIGAPGAASLLSPTVAAVG
SVPGAPVLPVTTQNVIMSTPTEFLLLKNMFDPALETDPDFDLDIRDDVQDECSKFGAVKH
IFVDKNTAGFVYLQFDSVAAAGKAQQALHGRWFAGKMITATFMSAQEYSTKFPNL

Transcript Sequence

Transcript ID

EER94178
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:24337515:24344462:-1 gene:SORBI_3001G237700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AATCCAGAAGGCTGCGACATAGGGTTTAGACTTCACAGTTCTCCTGCCTCCCTCCCCCTT
CCCCTCCCCCAACGCGCCGTCTAGGGTTTCGCAGACGCACCCCGATCCACTCGAGCGCCC
CGCCCCGCTCCGCCTCCATGGAGTTCGACGAGTACGAGTACCTGGAGAAGGCAGTGGAGC
CAGCTGCTCCGCCGGCCAATGGCTCCGGCGAGAAGGACCGAGGATCGCGCCGCCGCGAGG
GCGGCGAGGACCGCATATCGAAGCGTTCCCGCTCGGGGGAGGACCGCGACCGGGACCGGG
ACCGGCACCGCAGCGGCCGGGAGCACCGCGACCGGGATAGGGATGACGGGAAGGAGAAGG
AGAGGAGCCGCGACAGCCGCGGGAAGGATAGGGACAGGGAAGGGAGAGAACGAGAGAAGG
ATAGGGGGGACAGACACCGGCTCAGGGAGAGGGAAGTGGAACGGGAGCGGAGGAGCCGGA
GCCGCTCGGAGCGGCGCCGTGCCGAGGAAGAGGAGATGGTGAGGGAGCTGGAGCGGGAGC
GCGAGCGCAGCGAGCGACACCTCTTTCGCGGTGACGTCAGGCGTAGGAAAGATGATGGGG
CAGAGCCAGAAGTTGATCCAGAAAGGGACCAGAGGACAGTATTTGCCTTCCAGCTATCTT
TGAAGGCAGACGAAAGAGATGTTTATGAGTTTTTCTCAAGGGCTGGGAAGGTTCGTGATG
TTCGTCTTATCATGGATCGAAACTCAAGACGTTCTAAAGGAGTTGGGTACATTGAGTTTT
ACGACGTCATGTCTGTTCCAATGGCAATTGCTCTGTCTGGTCAACCGCTGCTTGGACAAG
CAGTGATGGTTAAGCCATCTGAGGCTGAAAAGAACTTGGTTCAGTCAAATGCGACTTCAG
GTGGTGCGGCTTCAGGTGGAGCAAGAAAATTGTATGTTGGCAATCTTCACTCAAATATTA
CTGAAGACCAATTGAGACAGGTATTTGAACCATTTGGGCAAGTGGAGCTTGTACAGCTTC
CTCTAGATCCAATGACTGGATTGTGCAAAGGTTATGGTTTTATTCAGTTTGCACGGCTTG
AAGATGCAAAAGCTGCACAGAGCTTGAATGGGCAGCTTGATATTGCCGGCAGAGTTATTA
AGGTTTCAGCTGTTACTGATCATGTGGGAGTGCAGGCTAGTGGAGCAACTACTGGAGATT
TAGATGATGATGAAGGTGGAGGCTTGGCACTAAATGCAAGCTCCAGAGCTGCCCTTATGC
TCAAATTGGACAGGAGTGGTACTGCAACCAGCTTAACTGGTGGTATTGGTGCTGCTGGAG
TGTCTTTACCAGCTACTTCAGTTATTGGGGCTCCAGGAGCTGCTTCTCTTCTATCACCAA
CAGTTGCTGCTGTTGGATCAGTTCCTGGGGCACCTGTGCTTCCTGTTACCACTCAGAATG
TGATCATGTCTACACCTACAGAATTCTTGTTGCTTAAAAACATGTTTGACCCAGCATTGG
AGACGGATCCTGATTTTGACTTGGATATTAGAGATGATGTCCAAGATGAATGTTCCAAGT
TTGGTGCAGTGAAGCATATTTTTGTTGACAAAAATACTGCAGGCTTTGTGTATCTGCAGT
TCGATAGTGTGGCTGCAGCAGGGAAGGCCCAACAAGCACTTCATGGAAGATGGTTTGCGG
GAAAGATGATTACAGCAACATTTATGTCGGCTCAGGAGTACAGTACAAAGTTTCCAAACT
TGTGAGCATACACGGGGAAGAGTTGGCCAGTTGGCTACTGTGCTCGTAGTGTTCGCAAGT
GCTGTATTGTTGGATGGTAGACTAGACGAACACCTTATTGATTGTATGACAGGATAGTTA
CAGCACTGGGCGTCAATACAATGTTTTATGTACTTTATTTACGGCGTCACATAGTGACCA
ACCATTATTTGTCCACCGAATGAAATGCCAAATGATATCAAGGCTTGTTCTTATATATGG
TTAATTTTCTGGACATCAACAAACTCAGGCCATGCGACCCGTTTGGCCATCAC