Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER94121
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:21889282:21895942:-1 gene:SORBI_3001G228200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTACCGCGCGGCCGCTAGCCTCGCCTCCAAGGCGCGGCAAGCCGGGAGCAGCGCCGCC
GCTCGCCAGGTTGGAAGCAGGCTTGCCTGGAGCAGGAACTATGCTGCCAAGGACATCAAG
TTTGGTGTTGAGGCCCGTGCTCTGATGTTGAGGGGTGTTGAGGAGTTGGCTGATGCGGTC
AAAGTGACAATGGGTCCTAAGGGGCGCAATGTGGTTATTGAGCAAAGCTTTGGTGCCCCT
AAAGTCACAAAGGATGGTGTGACTGTTGCAAAGAGCATTGAATTTAAGGATAGAGTAAAG
AATGTTGGTGCAAGCCTTGTGAAACAGGTTGCTAATGCAACTAATGACACTGCTGGTGAT
GGTACCACATGTGCCACTGTTTTGACAAAAGCAATATTTACTGAGGGCTGCAAATCTGTC
GCGGCTGGAATGAATGCAATGGATTTAAGGCGTGGAATCTCAATGGCTGTTGATGCTGTT
GTGACCAATCTTAAGAACATGGCCAGAATGATCAGCACTTCAGAAGAAATTGCACAGGTG
GGTACAATATCAGCAAATGGGGAAAGAGAAATTGGTGAGCTTATTGCAAAGGCTATGGAG
AAGGTTGGCAAAGAGGGTGTGATCACTATTGCGGACGGTAACACGCTTTATAATGAGCTT
GAAGTTGTGGAGGGTATGAAACTTGACAGAGGTTACATCTCTCCGTACTTCATTACAAAC
TCAAAAACCCAGAAATGTGAATTGGACGACCCATTGATCTTAATTCATGACAAGAAGGTT
ACGAACATGCATGCTGTGGTTAAGGTTTTAGAATTGGCTCTAAAGAAACAAAAGCCTTTA
CTGATTGTTGCAGAAGATGTGGAAAGCGAAGCATTGGGCACTCTGATTATTAACAAGCTT
CGTGCAGGCATCAAGGTCTGCGCTGTCAAAGCTCCTGGTTTTGGAGAAAACAGGAAGGCA
AACTTACAGGACCTCGCTATCCTTACTGGAGGAGAGGTAATAACTGAAGAGCTAGGAATG
AACCTTGAGAATGTTGAACCTCACATGCTGGGTACATGCAAAAAGGTGACCGTCTCTAAG
GATGACACTGTTATTCTTGATGGATCTGGAGACAAGAAATCTATTGAAGAGAGGGCAGAG
CAGATTAGATCGGCAATTGAGAATAGCACTTCAGATTATGACAAGGAAAAGCTCCAGGAG
CGGTTGGCAAAGCTCTCTGGAGGTGTTGCTGTACTGAAGATTGGAGGAGCCAGCGAAGCA
GAAGTTGGTGAGAAGAAGGATAGAGTCACAGATGCACTGAATGCTACAAAAGCTGCCGTT
GAAGAGGGTATTGTACCAGGTGGTGGTGTTGCTCTTCTCTATGCATCCAAGGAGCTTGAT
AAATTGCAGACAGCAAACTTTGATCAGAAGATTGGTGTGCAAATCATTCAGAATGCTTTG
AAGACACCTGTACACACCATTGCCTCCAATGCTGGGGTGGAGGGAGCAGTAGTTGTGGGC
AAGCTTTTGGAGCAAGAAAATACTGACCTGGGTTATGATGCTGCTAAAGGTGAATACGTT
GACATGGTGAAGGCTGGTATCATTGACCCGCTAAAGGTGATCAGAACTGCTTTGGTGGAT
GCTGCTAGCGTGTCGTCCCTGATGACCACCACGGAATCCATAATTGTAGAGATCCCCAAG
GAAGAGGCGCCGGCTCCAGCAATGGGTGGTGGCATGGGTGGAATGGATTACTAA

Peptide Sequence

PEP ID

EER94121
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:21889282:21895942:-1 gene:SORBI_3001G228200 transcript:EER94121 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MYRAAASLASKARQAGSSAAARQVGSRLAWSRNYAAKDIKFGVEARALMLRGVEELADAV
KVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGD
GTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKNMARMISTSEEIAQV
GTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFITN
SKTQKCELDDPLILIHDKKVTNMHAVVKVLELALKKQKPLLIVAEDVESEALGTLIINKL
RAGIKVCAVKAPGFGENRKANLQDLAILTGGEVITEELGMNLENVEPHMLGTCKKVTVSK
DDTVILDGSGDKKSIEERAEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEA
EVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNAL
KTPVHTIASNAGVEGAVVVGKLLEQENTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVD
AASVSSLMTTTESIIVEIPKEEAPAPAMGGGMGGMDY

Transcript Sequence

Transcript ID

EER94121
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:21889282:21895942:-1 gene:SORBI_3001G228200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACAAGCAACCACCAGTAAAACCCTAAACCCTAGTGGATGCTTCTAGAGCCGCCGCGCACC
CTCCATTAGTCTCGCCCGCGCTGTCTCTAAAATCCACCCGTCCCCCACCTCCTCGGCGCC
TCGCGTCCTTTCCCCCTCCGCAAGAAAGAAACGAAGCAAACTCTCCGCCGCCTCCGTTCT
TCCGCACCACCCAAAGCTCTCGCCGACCACAGCCTCGGTCCCCGCGCCTCCTTCCGCAGT
CATGTACCGCGCGGCCGCTAGCCTCGCCTCCAAGGCGCGGCAAGCCGGGAGCAGCGCCGC
CGCTCGCCAGGTTGGAAGCAGGCTTGCCTGGAGCAGGAACTATGCTGCCAAGGACATCAA
GTTTGGTGTTGAGGCCCGTGCTCTGATGTTGAGGGGTGTTGAGGAGTTGGCTGATGCGGT
CAAAGTGACAATGGGTCCTAAGGGGCGCAATGTGGTTATTGAGCAAAGCTTTGGTGCCCC
TAAAGTCACAAAGGATGGTGTGACTGTTGCAAAGAGCATTGAATTTAAGGATAGAGTAAA
GAATGTTGGTGCAAGCCTTGTGAAACAGGTTGCTAATGCAACTAATGACACTGCTGGTGA
TGGTACCACATGTGCCACTGTTTTGACAAAAGCAATATTTACTGAGGGCTGCAAATCTGT
CGCGGCTGGAATGAATGCAATGGATTTAAGGCGTGGAATCTCAATGGCTGTTGATGCTGT
TGTGACCAATCTTAAGAACATGGCCAGAATGATCAGCACTTCAGAAGAAATTGCACAGGT
GGGTACAATATCAGCAAATGGGGAAAGAGAAATTGGTGAGCTTATTGCAAAGGCTATGGA
GAAGGTTGGCAAAGAGGGTGTGATCACTATTGCGGACGGTAACACGCTTTATAATGAGCT
TGAAGTTGTGGAGGGTATGAAACTTGACAGAGGTTACATCTCTCCGTACTTCATTACAAA
CTCAAAAACCCAGAAATGTGAATTGGACGACCCATTGATCTTAATTCATGACAAGAAGGT
TACGAACATGCATGCTGTGGTTAAGGTTTTAGAATTGGCTCTAAAGAAACAAAAGCCTTT
ACTGATTGTTGCAGAAGATGTGGAAAGCGAAGCATTGGGCACTCTGATTATTAACAAGCT
TCGTGCAGGCATCAAGGTCTGCGCTGTCAAAGCTCCTGGTTTTGGAGAAAACAGGAAGGC
AAACTTACAGGACCTCGCTATCCTTACTGGAGGAGAGGTAATAACTGAAGAGCTAGGAAT
GAACCTTGAGAATGTTGAACCTCACATGCTGGGTACATGCAAAAAGGTGACCGTCTCTAA
GGATGACACTGTTATTCTTGATGGATCTGGAGACAAGAAATCTATTGAAGAGAGGGCAGA
GCAGATTAGATCGGCAATTGAGAATAGCACTTCAGATTATGACAAGGAAAAGCTCCAGGA
GCGGTTGGCAAAGCTCTCTGGAGGTGTTGCTGTACTGAAGATTGGAGGAGCCAGCGAAGC
AGAAGTTGGTGAGAAGAAGGATAGAGTCACAGATGCACTGAATGCTACAAAAGCTGCCGT
TGAAGAGGGTATTGTACCAGGTGGTGGTGTTGCTCTTCTCTATGCATCCAAGGAGCTTGA
TAAATTGCAGACAGCAAACTTTGATCAGAAGATTGGTGTGCAAATCATTCAGAATGCTTT
GAAGACACCTGTACACACCATTGCCTCCAATGCTGGGGTGGAGGGAGCAGTAGTTGTGGG
CAAGCTTTTGGAGCAAGAAAATACTGACCTGGGTTATGATGCTGCTAAAGGTGAATACGT
TGACATGGTGAAGGCTGGTATCATTGACCCGCTAAAGGTGATCAGAACTGCTTTGGTGGA
TGCTGCTAGCGTGTCGTCCCTGATGACCACCACGGAATCCATAATTGTAGAGATCCCCAA
GGAAGAGGCGCCGGCTCCAGCAATGGGTGGTGGCATGGGTGGAATGGATTACTAAGACAT
CACACCCATGATACACATCAAAGCAGGGACTTTTTTTTTCCGTTTTTGGCGGTGCAAGTT
CATCTTTACTGTATTTTGGTCGATGATGAGTTGGTTGTCAGGCGGATACAATTTTGAGTC
TGCGGACGTAGGACCTCTCAATAGCTCCAAACGGAGCTATAGTGTGGGAATAATAAATAT
ATGAACAGTAGGTTCTTTGAGATCTGAAGCTGTAGATCAAGATTGGATTCAGACACCTTG
TGCCGAACAAACAGTAGTCTGATTATTACATTTTTTGGCTGAGGTAAAATCAGATTGCCG
TTCTGTTTTGTCAGTGTAGGCCGGATCTTGTGCTTCTTTGCTAGAGTACAATCCAATAGT
CGGACACGTCGGATTTAGCAGCTTCAAGCTGGATGAGAGATCAGCTTGGAGCTACATGTA
CAAGGTCAATGTCATTAGACTTGGTAGAGTGCATCAGCATAGCAAAGATTACCGCTAGTT
ACATGCATCTGCATAACAAAGATTACCGCTACCTCGATGGCACACGGGATGGAGAGGAAG
AAAGGATGGAGAGAAAGAAAGGCCTATTCTATGGAGAAGAGGA