Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER94106
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:21473979:21480077:-1 gene:SORBI_3001G224200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGCAAGTCAAACAAGAAGTCCAGTGTTGGGGCTGCACCTGCTGCTGTCGCAGTTCCA
GAGGGGAAATCTGTAAAGAAGGGGAAGAGGAATGCAGAAGATGAGATCGAGAAGGCCGTG
AGTGCCAAGAAGCAAAAGACTGCACCTGAAAAGGCCGTGCCAGTTAAGAAGCAGCCCCCT
CCAAAGAAAGTTGAGAGCAGCGACTCTGAGGAGGATTCTTCAGATTCTGAAGTGAAGGTG
CCGGTTAAGAAGCAGCCCCCTCCAAAGAAAGTTGAGAGCAGCAGCTCTGAGGATTCTTCG
GATTCTGAAGTGGAGGTGCCAGTTAAGAAGCAGCCCCCTCCAAAGAAAGTTGAGAGCAGC
AGCTCTGACTCTGAGGAGGATTCTTCAGATTCTGAAGTGGAGGTTAAGGTGCAGCCAAAA
AAGGTTATTCAACCAAAGAAAGGTACACAACTTGCTAAACAGGAGTCCAGTGATGACAGC
AGCTCTGAGAGCTCAGATGATGAACCTTCCAAAAAACCAGTTGCCGGTTCAAAGAAGCCA
GCTGCCAGTAGTAGCGACAGTGATGACAGCAGTGACAGTGATGATAGCAGTTCTGATGAG
GAACCTGCAAAAAAACCCACTGTCCTTTCAAAGAAGCCTGTCACAGCAGTTAGTAATGGT
TCAAAACAGGTTAAGCATGATAGCAGCAGCTCTGACAGTAGCTCAGATGAGGATGAAAAA
CCTGCTGCTAACCTAAAGAAGCCTCCAGTTGCCTCTCTGCAAAAGAAGACCCAAGAATCT
GATAGCTCTGACAGTGATTCTGATGATGATGAATCAGAAGATGATATTCCTGCTAAAGCT
CCAGTAGTGGCCAAGAAAAAGGAAGCATCCAGTGACAGTTCTGATTCTGAGTCTGAGGAT
GAGGATAATAATGCTAAAACAGTACAGCCTGTGAAGGCTGCTGCTCCTAAAAAGAAGGAA
GAATCTAGTGGGAGCTCAGAATCTGACTCAGAGTCAGATTCTGATTCTGATGAACCTGAA
AAACCTACTGTGCCTGGGAAGAGGCCTCTAGCAACAAATAAGAAGAATGAAGAATCCAGC
GACGAATCTGATGGCAGCTCTGATGAGAGTTCTGATGAAAGTGACGAGGAGCCACCACAA
AAGAAGTCTAAGGAAACTCCTGTAGACACTACGCAAAAGTCAGCACATAATGAGCCCAAA
ACTCCTGCCAAAAGCCAAAGTCAGGCTACTGGTTCGAAGACTATTTTTGTTGGGAATTTA
GCTTATAGTATAGAGCGTGAACAAGTTAAGGAATTTTTTGAGGAGGCTGGAGAAGTTGTA
GATATTCGTTTGTCTACTTTTGATGATGGGAGTTTCAAGGGTTATGGACATGTTGAATTT
GCTACTGCTGAAGCTGCTCAAAAGGCACTTGAATTTGGTGGTCGGGACCTGATGGGGCGT
TCTCTAAGGATTGACCTGGCTGTCGAGAGGGGTGCATACACTCCTAACAGCGGGAAGGAC
AACGGTTCATTCAGGAAGTCTGCTCAAAGGTCAGGCAACACCGTGTTTATCAAGGGCTTT
GACACGTCTGTTGGAGAGGACCAGATCCGGAGTGCTCTCGAAGAACATTTTCGCTCATGT
GGAGACATTACCCGTATTTCAATTCCGAAGGATTATGACACTGGTGCAAGCAAAGGAATG
GCATACATGGATTTCAAGGACCCGGATTCCTTGAATAAAGCATATGAGATGAATGGAACC
TACCTTGGTGACTACAGCTTGTATGTCGATGAGGCAAAGCCGAGACCTGATAACAACAGG
GACGGTGGCTTCAGTGGTGGGCGTGGTAGCAGAGGGAGGAGTGACAGGGGGCGTGGTGAC
AGAGGCCGTGGGCGTGGATTTGGAGGCCGTGGTGGAAGGGGTGACAGAGGCCGTGGAGGC
CGTGGCACGCCTTTCAGACAGACTGCTGGTACCCCTAGTGCAGGAAAGAAGACAACGTTT
GGTGATGACGATTGA

Peptide Sequence

PEP ID

EER94106
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:21473979:21480077:-1 gene:SORBI_3001G224200 transcript:EER94106 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGKSNKKSSVGAAPAAVAVPEGKSVKKGKRNAEDEIEKAVSAKKQKTAPEKAVPVKKQPP
PKKVESSDSEEDSSDSEVKVPVKKQPPPKKVESSSSEDSSDSEVEVPVKKQPPPKKVESS
SSDSEEDSSDSEVEVKVQPKKVIQPKKGTQLAKQESSDDSSSESSDDEPSKKPVAGSKKP
AASSSDSDDSSDSDDSSSDEEPAKKPTVLSKKPVTAVSNGSKQVKHDSSSSDSSSDEDEK
PAANLKKPPVASLQKKTQESDSSDSDSDDDESEDDIPAKAPVVAKKKEASSDSSDSESED
EDNNAKTVQPVKAAAPKKKEESSGSSESDSESDSDSDEPEKPTVPGKRPLATNKKNEESS
DESDGSSDESSDESDEEPPQKKSKETPVDTTQKSAHNEPKTPAKSQSQATGSKTIFVGNL
AYSIEREQVKEFFEEAGEVVDIRLSTFDDGSFKGYGHVEFATAEAAQKALEFGGRDLMGR
SLRIDLAVERGAYTPNSGKDNGSFRKSAQRSGNTVFIKGFDTSVGEDQIRSALEEHFRSC
GDITRISIPKDYDTGASKGMAYMDFKDPDSLNKAYEMNGTYLGDYSLYVDEAKPRPDNNR
DGGFSGGRGSRGRSDRGRGDRGRGRGFGGRGGRGDRGRGGRGTPFRQTAGTPSAGKKTTF
GDDD

Transcript Sequence

Transcript ID

EER94106
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:21473979:21480077:-1 gene:SORBI_3001G224200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCCCCCGAGCCGACCGGAAACCCTACCCATCCCCCTGCGCCGCCGCCGCCGCCCGCTCCT
TCACCTCCTACATCTTCTCCGGCCGTCTTCCCGATCCCCTACGTTCGGTAAGGAACCCCT
AGCCCTGGATGAAGTGCTTGATTTATTGTTGATTCCGCGGGATCATTGCGTCTCTTCTAG
TCCTCGAATACGAATGCTTAGCTCTCTCCAGTCTCCAATCCATTCTATTCGCTGCCGGTT
TGCTTATTTTCTGCGTGCGTGGTGGAGCACGAGTCTTGCCCGAGTCTTGCCCAACATCAC
CTGCTGATATTTTTCTTTACCATTTACTACCTTTGCGTGTACGGGGCTGACTAATTTCCT
CGATGAAATTGGTAGTTTTTAGCTTTCATCCTATGTTAAAATGACCAATATTTACGAGGA
AGTGGGACTTAACTTTTTTCCTATTGAATAGCATGTGTCTGTTGCCTATGTTAGGATGGC
CATATTCATATATATGTTGTTTTGTGCATGTGCTGTATTAGTATTGTTATATGCCTTATT
CTTAAATTGGTGCCCCCATTTCTTTTTATGTAGAGCTTAGCTGAGGCATTATGGGCAAGT
CAAACAAGAAGTCCAGTGTTGGGGCTGCACCTGCTGCTGTCGCAGTTCCAGAGGGGAAAT
CTGTAAAGAAGGGGAAGAGGAATGCAGAAGATGAGATCGAGAAGGCCGTGAGTGCCAAGA
AGCAAAAGACTGCACCTGAAAAGGCCGTGCCAGTTAAGAAGCAGCCCCCTCCAAAGAAAG
TTGAGAGCAGCGACTCTGAGGAGGATTCTTCAGATTCTGAAGTGAAGGTGCCGGTTAAGA
AGCAGCCCCCTCCAAAGAAAGTTGAGAGCAGCAGCTCTGAGGATTCTTCGGATTCTGAAG
TGGAGGTGCCAGTTAAGAAGCAGCCCCCTCCAAAGAAAGTTGAGAGCAGCAGCTCTGACT
CTGAGGAGGATTCTTCAGATTCTGAAGTGGAGGTTAAGGTGCAGCCAAAAAAGGTTATTC
AACCAAAGAAAGGTACACAACTTGCTAAACAGGAGTCCAGTGATGACAGCAGCTCTGAGA
GCTCAGATGATGAACCTTCCAAAAAACCAGTTGCCGGTTCAAAGAAGCCAGCTGCCAGTA
GTAGCGACAGTGATGACAGCAGTGACAGTGATGATAGCAGTTCTGATGAGGAACCTGCAA
AAAAACCCACTGTCCTTTCAAAGAAGCCTGTCACAGCAGTTAGTAATGGTTCAAAACAGG
TTAAGCATGATAGCAGCAGCTCTGACAGTAGCTCAGATGAGGATGAAAAACCTGCTGCTA
ACCTAAAGAAGCCTCCAGTTGCCTCTCTGCAAAAGAAGACCCAAGAATCTGATAGCTCTG
ACAGTGATTCTGATGATGATGAATCAGAAGATGATATTCCTGCTAAAGCTCCAGTAGTGG
CCAAGAAAAAGGAAGCATCCAGTGACAGTTCTGATTCTGAGTCTGAGGATGAGGATAATA
ATGCTAAAACAGTACAGCCTGTGAAGGCTGCTGCTCCTAAAAAGAAGGAAGAATCTAGTG
GGAGCTCAGAATCTGACTCAGAGTCAGATTCTGATTCTGATGAACCTGAAAAACCTACTG
TGCCTGGGAAGAGGCCTCTAGCAACAAATAAGAAGAATGAAGAATCCAGCGACGAATCTG
ATGGCAGCTCTGATGAGAGTTCTGATGAAAGTGACGAGGAGCCACCACAAAAGAAGTCTA
AGGAAACTCCTGTAGACACTACGCAAAAGTCAGCACATAATGAGCCCAAAACTCCTGCCA
AAAGCCAAAGTCAGGCTACTGGTTCGAAGACTATTTTTGTTGGGAATTTAGCTTATAGTA
TAGAGCGTGAACAAGTTAAGGAATTTTTTGAGGAGGCTGGAGAAGTTGTAGATATTCGTT
TGTCTACTTTTGATGATGGGAGTTTCAAGGGTTATGGACATGTTGAATTTGCTACTGCTG
AAGCTGCTCAAAAGGCACTTGAATTTGGTGGTCGGGACCTGATGGGGCGTTCTCTAAGGA
TTGACCTGGCTGTCGAGAGGGGTGCATACACTCCTAACAGCGGGAAGGACAACGGTTCAT
TCAGGAAGTCTGCTCAAAGGTCAGGCAACACCGTGTTTATCAAGGGCTTTGACACGTCTG
TTGGAGAGGACCAGATCCGGAGTGCTCTCGAAGAACATTTTCGCTCATGTGGAGACATTA
CCCGTATTTCAATTCCGAAGGATTATGACACTGGTGCAAGCAAAGGAATGGCATACATGG
ATTTCAAGGACCCGGATTCCTTGAATAAAGCATATGAGATGAATGGAACCTACCTTGGTG
ACTACAGCTTGTATGTCGATGAGGCAAAGCCGAGACCTGATAACAACAGGGACGGTGGCT
TCAGTGGTGGGCGTGGTAGCAGAGGGAGGAGTGACAGGGGGCGTGGTGACAGAGGCCGTG
GGCGTGGATTTGGAGGCCGTGGTGGAAGGGGTGACAGAGGCCGTGGAGGCCGTGGCACGC
CTTTCAGACAGACTGCTGGTACCCCTAGTGCAGGAAAGAAGACAACGTTTGGTGATGACG
ATTGAAGATCCCATGGCTGGCGATTATAGTGAAACCAACTATATTGTACCTTTCATACTT
CTGCTATCTGTTCTCCTTTTGGAGGCTGTAGTGTTTTGTTTGCTTGATAATTTTGACAAT
TGTATTGCCATTTTTAACATTCGGAGCTATGAAGTTATATCGTAGACGTGATTTATATTT
ATAATATATGAGATCAAGTTCGT