Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93977
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:18313423:18316009:-1 gene:SORBI_3001G201800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCGTCGCTCAAGTTCACGGTGCGGAGGCGTCCGGCGGTGCTGGTGGCGCCGGCG
TCCCCGACGCCGCGGGAGCTGAAGCGGCTCTCGGACATCGACGACCAGGACGGCCTCCGG
TTCCACATCCCCGTCATCCAGTTCTACCGCCGGAGCGCGCTCATGGGCGGGCGGGACCCC
GCGCCGGTCATCCGGGACGCCGTGGCCAGGGCGCTCGTGCACTACTACCCGTTCGCCGGG
CGGCTCAGGGAGCTGCAAGCGCGCAAGCTCGCCGTGGAGTGCACCGGCGAGGGCGTGCTG
TTCATCGAGGCCGACGCCGACGTCCGCCTCGACCACTTCGGCGACGCGCTGCAGCCGCCG
TTCCCGTGCCTCGACGAGCTCATCTTCGACGTCCCCGGCTCGTCCCAGGTCCTCGGCTCG
CCGCTCCTCCTCTTCCAGGTGACGCGGCTGGCGTGTGGGGGCTTCATCTTGGGTGTGCGG
CTGCACCACACGATGGCGGACGCGCAGGGGCTGGTGCAGTTCCTGGGCGCCGTGGCGGAG
CTGGCGCGTGGCGCGGCGGCGCCGACGGTCCGGCCGGTCTGGTGCCGAGAGCTGCTGGAG
GCGCGCGACCCGCCGCGGCCGGCGTTCGCGCACCGCGAGTACGACGAGGTGCCGGACACC
AAGGGCACCCTCATCCCGCTGGACGACATGGTGCACCGGTCCTTCTTCTTCGGGCGCCAG
GAGCTTGCCGCCATCCGCGCCAACCTCCCGCCGGCGCTCCGCGCGCGCGCCTCCACGTTC
GACCTCCTGACGGGGCTCCTGTGGAAGTGCCGCACGGCGGCGCTGGCGCCGGACGCCGAC
GAGGTGATGCGGATGATCTGCATCGTCAACGCCCGCGGCGGCAAGTCCGGGATCGCCATC
CCGGAGGGCTACTACGGCAACGCGTTCGCGTTCCCGGTGGCCGTCGCGACGGCGGGGGAG
CTCGCCGCGAGCCCGCTGGGCTACGCCGTGGAGCTGGTGAAGCGCGCCAAGGGCGAGGTG
AACGTGGAGTACATGCGGTCGGTGGCCGACCTGATGGTGCTGCGCGGCCGGCCGCACTTC
ACGGCGGTGCGCGCGTACCTGGCGTCCGACGTGACCAAGGCCGGGTTCGGCGACCTCGAC
TTCGGCTGGGGAAAGCCGGTGTACGGAGGCCCCGCCAAGGGCGGCGTGGGCGCCATCCCC
GGGGTGGCCAGCTTCTTCATCCCGTTCAAGAACGCCAAGGGAGAGGACGGCATCGTCGTG
CCTATGTGCCTGCCCGGCCTCGCCATGGAGACGTTCGTGCAGGAGATGGGCAAGCTGCTG
AGCCCACCCGCAGGCGCAGGCGCAGGCGCAGAGCAGAAGCAGCAGGACACGTTCCCCGTC
ATCAGGTCCGCGCTCTGA

Peptide Sequence

PEP ID

EER93977
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:18313423:18316009:-1 gene:SORBI_3001G201800 transcript:EER93977 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASSLKFTVRRRPAVLVAPASPTPRELKRLSDIDDQDGLRFHIPVIQFYRRSALMGGRDP
APVIRDAVARALVHYYPFAGRLRELQARKLAVECTGEGVLFIEADADVRLDHFGDALQPP
FPCLDELIFDVPGSSQVLGSPLLLFQVTRLACGGFILGVRLHHTMADAQGLVQFLGAVAE
LARGAAAPTVRPVWCRELLEARDPPRPAFAHREYDEVPDTKGTLIPLDDMVHRSFFFGRQ
ELAAIRANLPPALRARASTFDLLTGLLWKCRTAALAPDADEVMRMICIVNARGGKSGIAI
PEGYYGNAFAFPVAVATAGELAASPLGYAVELVKRAKGEVNVEYMRSVADLMVLRGRPHF
TAVRAYLASDVTKAGFGDLDFGWGKPVYGGPAKGGVGAIPGVASFFIPFKNAKGEDGIVV
PMCLPGLAMETFVQEMGKLLSPPAGAGAGAEQKQQDTFPVIRSAL

Transcript Sequence

Transcript ID

EER93977
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:18313423:18316009:-1 gene:SORBI_3001G201800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTGACTTGACCTCACATGACGAGGGCGTCTGGGCTGGGCTGGGCGTGTAAACTTGTTTAG
CAACTGCTCCCTAATTTCCACTGCAAAACCATCTCTGACATTCCCTCGCTGTACTGTACG
GGCGAGTATATAATTGCGCCCAGTACCCCTCCCTCTCGGCACACCAAAAACCCAGCTAGC
GGCACCAGGAGCAGGCACGAGCAGCCTTAATCTGCCACCTCCTCCAGACCCGGCGAGCAC
CACCACCAGTCTGTGCGTCACCAGAATAATGGCGTCGTCGCTCAAGTTCACGGTGCGGAG
GCGTCCGGCGGTGCTGGTGGCGCCGGCGTCCCCGACGCCGCGGGAGCTGAAGCGGCTCTC
GGACATCGACGACCAGGACGGCCTCCGGTTCCACATCCCCGTCATCCAGTTCTACCGCCG
GAGCGCGCTCATGGGCGGGCGGGACCCCGCGCCGGTCATCCGGGACGCCGTGGCCAGGGC
GCTCGTGCACTACTACCCGTTCGCCGGGCGGCTCAGGGAGCTGCAAGCGCGCAAGCTCGC
CGTGGAGTGCACCGGCGAGGGCGTGCTGTTCATCGAGGCCGACGCCGACGTCCGCCTCGA
CCACTTCGGCGACGCGCTGCAGCCGCCGTTCCCGTGCCTCGACGAGCTCATCTTCGACGT
CCCCGGCTCGTCCCAGGTCCTCGGCTCGCCGCTCCTCCTCTTCCAGGTGACGCGGCTGGC
GTGTGGGGGCTTCATCTTGGGTGTGCGGCTGCACCACACGATGGCGGACGCGCAGGGGCT
GGTGCAGTTCCTGGGCGCCGTGGCGGAGCTGGCGCGTGGCGCGGCGGCGCCGACGGTCCG
GCCGGTCTGGTGCCGAGAGCTGCTGGAGGCGCGCGACCCGCCGCGGCCGGCGTTCGCGCA
CCGCGAGTACGACGAGGTGCCGGACACCAAGGGCACCCTCATCCCGCTGGACGACATGGT
GCACCGGTCCTTCTTCTTCGGGCGCCAGGAGCTTGCCGCCATCCGCGCCAACCTCCCGCC
GGCGCTCCGCGCGCGCGCCTCCACGTTCGACCTCCTGACGGGGCTCCTGTGGAAGTGCCG
CACGGCGGCGCTGGCGCCGGACGCCGACGAGGTGATGCGGATGATCTGCATCGTCAACGC
CCGCGGCGGCAAGTCCGGGATCGCCATCCCGGAGGGCTACTACGGCAACGCGTTCGCGTT
CCCGGTGGCCGTCGCGACGGCGGGGGAGCTCGCCGCGAGCCCGCTGGGCTACGCCGTGGA
GCTGGTGAAGCGCGCCAAGGGCGAGGTGAACGTGGAGTACATGCGGTCGGTGGCCGACCT
GATGGTGCTGCGCGGCCGGCCGCACTTCACGGCGGTGCGCGCGTACCTGGCGTCCGACGT
GACCAAGGCCGGGTTCGGCGACCTCGACTTCGGCTGGGGAAAGCCGGTGTACGGAGGCCC
CGCCAAGGGCGGCGTGGGCGCCATCCCCGGGGTGGCCAGCTTCTTCATCCCGTTCAAGAA
CGCCAAGGGAGAGGACGGCATCGTCGTGCCTATGTGCCTGCCCGGCCTCGCCATGGAGAC
GTTCGTGCAGGAGATGGGCAAGCTGCTGAGCCCACCCGCAGGCGCAGGCGCAGGCGCAGA
GCAGAAGCAGCAGGACACGTTCCCCGTCATCAGGTCCGCGCTCTGAGGTGAGGAGGAGTG
CGAGTGAGCTGATAGCTCAGGCAGCAGGCACGGCATCGATCAAACCACCTCGTTTTCGCT
TCGTGCTATGGCAAATACACGTAATCGGCGGATCCAGAGCTTTCGTGATGCGTATGCGTA
GTGGGTGAACCAAGTTGATGTGTGCGTGGAGTTACGTTGTTAATGTATATGTACTGTACC
CCTACGCTCCCCGCCGGCTGAAATGCGCGCGTTTGTGCAGGGCGCTACTGAGGCCGGCGG
CTATGGGTTGTTGTGTATGTAGCCTGTAGATTTGTATACGTATATTTTGGTACCTTTTCA
TCCAGTAATTCATATACTTCTTCCTTTCTTTTATTAATCCAAAATTCGTACTTCTTCTTT
AAGAAAAAACTAAATTGGTACTTCTTTTAAAACAAGTGCTCTGCGTATATATCCCCTTAT
ACGGTAGATCTCATTTGGCACAGCTTTCATAGCACTTTCATAAGCTGTTTTTTTAATAAA
TGGATTAAAATAGAAAATCTCTTTAGGTAGAGCTCTTCAAAATCCACTCTCAGTGCCCAC
ACGTGTGGAGGCTTGATGAAGCTAAAAGTATTAGCTTTTCTCTGCTTTCTATCTCAAATT
TACTGTAAAATACTACTTTCAAACGTTTGTTTTAAAACAACTTCAATTTCATTAGTGGGA
TTGCTTCTTCATCATCACAACTAAAAAATACGAAATGTCAATGTCTACCGGCAACACCAA
AAACAAACCTATGATCTATATCTATACTGCAAGGAAAAAAATTCACACAAAAATTGTCAA
TTCAAATGCACACCAAAG