Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93896
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:15876732:15881035:-1 gene:SORBI_3001G185600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGCACGGCGAGCGATCAGAACACGCCGCTCCTCCCGGCAGATGGCGGCAACGATGAC
GGCGAAGGCGTGGCGGTGCTGCCGGGCGAAGCAGCTGGCGGCGCCGGTGGCGGGCACGGC
GGGGTGAGCGCGCAGCTGGAGCGTATCCTCGCCGACGAGTCGGTGCCCCGTGCGCGGCGG
CTGGCGCGCGCGGCGCGTGTGGAGCTCCGCCTGCTCGTGGCGCTGGCCGCCCCCGCCGTG
GCCGTCTACATGATCAACTACTCCATGTCCCTGTCCACGAGGATCTTCTGCGGGCAGCTC
GGCACGCTCGAGCTCGCCGCCGCCTCCCTCGGCAACGTCGGCATCCAGGTCTTCGCGTAC
GGCCTCATGCTGGGCATGGGCAGCGCGGTGGAGACGCTGTGCGGGCAGGCCTACGGCGCG
CACAAGTACGACATGCTGGGCATCTACATGCAGCGCTCCATCGTCCTGCTCACGGCCACC
GGCGTCCCGCTCGCCGTCGTCTACGTGTTCTCGAAGCAGATCCTGCTGCTCCTGGGGGAG
TCGGAGCGGATCGCGGAGGCGGCGTGGGTGTTCGTGCTGGGCCTCATCCCGCAGATCTTC
GCCTACGCCTTCAACTTCCCGATCCAGAAGTTCCTGCAGGCGCAGAGCATCGTGGCGCCC
AGCGCCTACATCTCCACGGCGGCGCTGGCCGGGCACCTGGTCCTCAGCTGGCTCGCCGTC
TACAGGATGGGGCTGGGCCTGCTGGGCGCGTCGCTGATCCTCAGCCTCAGCTGGTGGGTC
ATCGTCGTCGCCCAGTTCGTGTACATCGTCAGGTCCCAGAGGTGCCGCCGCCGGACGTGG
ACGGGATTCTCCTGCAGGGCGTTCTCCGGCTTGCCGGAGTTCCTCAAGCTCTCGTTCGCG
TCGGCGGTCATGCTTTGCCTCGAGACGTGGTACACGCAGATCACCGTGCTTGTAGCGGGC
TTGCTCAAGGACCCGGAGATCGCCCTTGATTCGCTTGCTGTCTGCATGTCCATATCAGGA
TGGGTGTTCATGGTATCGGTAGGCTTCAACGCTGCTGCTAGCGTGAGAGTGAGCAACGAG
CTCGGAGCCGGGCATCCCATGGCGACATCTTTCTCTGTCAAGGTCGTGACCACGCTGTCT
CTGATGGTGGCGTCCATTATAGCTGTCATCGTCATGTGCCTCCGCGACTACATCAGCTAC
GTGTTCACCAAAGGGGATGACGTCGCGCGCGCCGTGTCCACCATGACCCCGCTGCTCGCC
GTCACCATCGTGCTCAACGGCATTCAGCCCGTCCTATCTGGTGTGGCCGTCGGCTGCGGT
TGGCAGGCCTTCGTGGCATATGTGAACATCGCATGCTACTACGGCATCGGGATCCCGCTT
GGCTGTGTTTTGGGATTCTACTTTGATCTAGGTGCCATGGGAATATGGGGTGGAATGATA
GGTGGATTGATTGTTCAGACGCTTGTTCTTATCTGGGTCACACTTCGCACCGATTGGAAT
AAAGAGGTTGAACAAGCGCGCATGAGGCTAAATAAATGGGAAGACAAAAAGAAGCCCCTT
TTGGCGGAAGATTGA

Peptide Sequence

PEP ID

EER93896
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:15876732:15881035:-1 gene:SORBI_3001G185600 transcript:EER93896 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGTASDQNTPLLPADGGNDDGEGVAVLPGEAAGGAGGGHGGVSAQLERILADESVPRARR
LARAARVELRLLVALAAPAVAVYMINYSMSLSTRIFCGQLGTLELAAASLGNVGIQVFAY
GLMLGMGSAVETLCGQAYGAHKYDMLGIYMQRSIVLLTATGVPLAVVYVFSKQILLLLGE
SERIAEAAWVFVLGLIPQIFAYAFNFPIQKFLQAQSIVAPSAYISTAALAGHLVLSWLAV
YRMGLGLLGASLILSLSWWVIVVAQFVYIVRSQRCRRRTWTGFSCRAFSGLPEFLKLSFA
SAVMLCLETWYTQITVLVAGLLKDPEIALDSLAVCMSISGWVFMVSVGFNAAASVRVSNE
LGAGHPMATSFSVKVVTTLSLMVASIIAVIVMCLRDYISYVFTKGDDVARAVSTMTPLLA
VTIVLNGIQPVLSGVAVGCGWQAFVAYVNIACYYGIGIPLGCVLGFYFDLGAMGIWGGMI
GGLIVQTLVLIWVTLRTDWNKEVEQARMRLNKWEDKKKPLLAED

Transcript Sequence

Transcript ID

EER93896
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:15876732:15881035:-1 gene:SORBI_3001G185600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AATCAGAATCACAAGTTCCAACACCGGGAAAATATCTCTATACAGAATTACAGATACAGA
CAGAGCCTCTCGCTAATTTCACGTCAAGCGTATGCGTACACTACAGGCGGTCACAGTTCG
CAATGCACCGCGGACGGATCAGATGCACAGACAGAACGAATGGCATAAACTACAGCAACC
AACAGCTAGCTATCACACGCATTTCTGCAAAGCTGAGCTGATAGCTGCATCCTGCATGCA
AAGCACAGAGACTCGACGACAGCTTGTTCCGTCGCCGGCGCGGCGCGTGTCACCAGCTAG
CGATGGGCACGGCGAGCGATCAGAACACGCCGCTCCTCCCGGCAGATGGCGGCAACGATG
ACGGCGAAGGCGTGGCGGTGCTGCCGGGCGAAGCAGCTGGCGGCGCCGGTGGCGGGCACG
GCGGGGTGAGCGCGCAGCTGGAGCGTATCCTCGCCGACGAGTCGGTGCCCCGTGCGCGGC
GGCTGGCGCGCGCGGCGCGTGTGGAGCTCCGCCTGCTCGTGGCGCTGGCCGCCCCCGCCG
TGGCCGTCTACATGATCAACTACTCCATGTCCCTGTCCACGAGGATCTTCTGCGGGCAGC
TCGGCACGCTCGAGCTCGCCGCCGCCTCCCTCGGCAACGTCGGCATCCAGGTCTTCGCGT
ACGGCCTCATGCTGGGCATGGGCAGCGCGGTGGAGACGCTGTGCGGGCAGGCCTACGGCG
CGCACAAGTACGACATGCTGGGCATCTACATGCAGCGCTCCATCGTCCTGCTCACGGCCA
CCGGCGTCCCGCTCGCCGTCGTCTACGTGTTCTCGAAGCAGATCCTGCTGCTCCTGGGGG
AGTCGGAGCGGATCGCGGAGGCGGCGTGGGTGTTCGTGCTGGGCCTCATCCCGCAGATCT
TCGCCTACGCCTTCAACTTCCCGATCCAGAAGTTCCTGCAGGCGCAGAGCATCGTGGCGC
CCAGCGCCTACATCTCCACGGCGGCGCTGGCCGGGCACCTGGTCCTCAGCTGGCTCGCCG
TCTACAGGATGGGGCTGGGCCTGCTGGGCGCGTCGCTGATCCTCAGCCTCAGCTGGTGGG
TCATCGTCGTCGCCCAGTTCGTGTACATCGTCAGGTCCCAGAGGTGCCGCCGCCGGACGT
GGACGGGATTCTCCTGCAGGGCGTTCTCCGGCTTGCCGGAGTTCCTCAAGCTCTCGTTCG
CGTCGGCGGTCATGCTTTGCCTCGAGACGTGGTACACGCAGATCACCGTGCTTGTAGCGG
GCTTGCTCAAGGACCCGGAGATCGCCCTTGATTCGCTTGCTGTCTGCATGTCCATATCAG
GATGGGTGTTCATGGTATCGGTAGGCTTCAACGCTGCTGCTAGCGTGAGAGTGAGCAACG
AGCTCGGAGCCGGGCATCCCATGGCGACATCTTTCTCTGTCAAGGTCGTGACCACGCTGT
CTCTGATGGTGGCGTCCATTATAGCTGTCATCGTCATGTGCCTCCGCGACTACATCAGCT
ACGTGTTCACCAAAGGGGATGACGTCGCGCGCGCCGTGTCCACCATGACCCCGCTGCTCG
CCGTCACCATCGTGCTCAACGGCATTCAGCCCGTCCTATCTGGTGTGGCCGTCGGCTGCG
GTTGGCAGGCCTTCGTGGCATATGTGAACATCGCATGCTACTACGGCATCGGGATCCCGC
TTGGCTGTGTTTTGGGATTCTACTTTGATCTAGGTGCCATGGGAATATGGGGTGGAATGA
TAGGTGGATTGATTGTTCAGACGCTTGTTCTTATCTGGGTCACACTTCGCACCGATTGGA
ATAAAGAGGTTGAACAAGCGCGCATGAGGCTAAATAAATGGGAAGACAAAAAGAAGCCCC
TTTTGGCGGAAGATTGAAAAATTATAAGGATGGTGCACGCGGTCAATGCATATGTTATGC
ATGGTGCTGATGATTGAAAACTAATAAGTAGTTAGCTTGTTTAGCATTGAAATGGTGAAA
CTGAAATTCGAACAAGAAGAGACTAATGGCTCTCTTGCACGAAGTTCTTTTCTTCCTCAA
TTGTGTGTCATGATTCTCGCGACAAAAAGAATGCAGCACCACTACAATAGAGAATTGGCT
TCTGCTATCCATTCATAAGTACCCATGCTAGAGGGATACCCCACCACTACACAAATGATT
TTATGAGACAATGATCGGGATTAACCGAGACAAGCACAATAAGGTGCTGCCTCCGTTAAT
CGCCAGCAGGCCCCACAATTGAGTGCCTACCTCTGTTAATCGTTAATGCAGGCGGTCACC
GTAAGACAACCGTCTCCGTTAATACTCCATTAATGGAGTCAGACACCTTATGATAACTGC
CTTTGTTGGAGCTACCCGTCTCGATTAATAGATTAACAAAGGTGATGCTTCTATGATGAC
CATCTCCATTAATAACCTATTAATGGAGGTGGCCGTCCTTAGGATATATGTTTGTCTTTG
CTAATCCTTGCATATAAAGGTAGCCCCCACCAACCCCATCTTATTCCTCCATAAGCTTAG
GGTTTGAGCTCTAGAACTTCGAAAATGTCATAAAATAATTTTTCCGGGAAGGAGTTTTGC
TTTAGATTGTTTGAAGGAGGACATTGTAGGCAGTTGCTATGCACTCCCACACCCTTATTC
TG