Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93781
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:13355784:13364699:-1 gene:SORBI_3001G162200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCAAAGATGGCGGCGGCGGTGGCTTCGCCAAGGTGCTGCTGCTCCACGTCGCCGCG
CTGTCGACGGCCGGCGCCGTCGCGGCCGCCGCTGCCCTGGCGCGGCGCCGGCTCACGGGA
GGAGACAGGAGGAAGAGGAAGCAGCAGCTGCAGGCGCCGGCAGCCATGCCCGAAATGCCC
AAGCTACGGGTGGCGGAGTCCGGCCGCCTGGAGTACCTCGAGAAGTTCTCGCACTACGTG
GCTAGGCAGCTGGGTTTCGAGGAGGTGAAGGAGTGCCCACAGCTGTGCAAGTTGGCAAAC
AACTACCTGAACAACAGCAAGACGTGCATGGAGGACATTTACGGGTTTTTCTCCAACGCC
AAGGACGCCGAGTGCCTTTACGTCAAGCTCATCGAGGAGCTGGACAGATGCATCCTCGGA
TATTTTGCCTTCCACTGGGACCATGCTACCTATCTCATCAGCTCGGCGTTGACCGCGGAC
ACCGGCACCAAAAAGAATTGGAGGAACGTGATCTTGGAAGCAACAAGGAAGCAGCGGTTC
GAGCGCGTGACGCGTGACCTGAAGGTGACGCGGGTGTTCTCGACGCTGGTGGAAGAGATG
AAGGCGATCGGCGTTGCGCCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGCAGTGC
ACGGAGGTGATGGCCCCCGTGGCGCACTCGGAGCGCAGCCCGGTGCTGCTGCTGATGGGC
GGCGGGATGGGCGCCGGGAAGAGCACGGTGCTCAAGGAGATCAAGCAGGAGGCGTTGTGG
GCCAACGCGGAGGGCAGCAACGCCGCCGTGGTGGTGGAGGCCGACGCGTTCAAGGAGACG
GACGTCATCTACCGCGCCATCAGCTCCATGCTGGGACACCACAACGACATGCTCCAGACG
GCAGAGCTGGTGCACCAGTCGTCGACGGACGCGGCGTCGTCGCTGCTGGTGACGGCGCTG
AACGAGGGGCGGGACGTCATCCTGGACGGCACGCTGTCGTGGGAGCCCTACGTGGAGCAG
ACCATCGCCATGGCGCGCGCCGTGCACCGCCAGCGCTACCGCATGGGCGTCGGCTACAAG
GTGGCCGACGACGGCACCGCCACCGAGACCTACTGGGAGCCCGACGACGCCACCGACCAA
CCGCCGTCGCCCGGCGGCGGGGCCACCACCACCACCACCAGGAGGCCGTACCGTATCGAG
GTCGTCGGGGTGGTCTGCGACGCGTACCTCGCCGTGGCGCGGGGCATCCGGCGGGCCATC
ATCACGCGGCGCGCCGTCAGGGTGCGGTCCCAGCTGCAGTCGCACAAGCGCTTCGCCGCC
GCGTTCCAGCGGTACAGCCGCCTCGTCGACGGCGCCAGGCTCTACAGCACCAACTCCATG
GGCTCCGCCAGGCTCATCGCCTGGAAGGACGGCGTCGGCAGCAGCCTGCTGGTGGAGCCC
CGGGAGTTCGACTGCCTCGACAAGGTGAGCAGGCTCAACGAGGACGCCACCTCCGTCCAC
GACCTCTACCCCGACGGCACCACCACCTGCGGCGAGCGCTCCGTCTGGGAGGACATGGTC
GCCGCGCCGGCGCGCGCCGACACGCAGCGCGAGCTCAAGGAGGCCATCCGCTCCGTCGAG
GCCGGCGGCGGCGAGCCTGACACGCCACCGGCGACGACGACGCACCAGCGCGAGCTCCTG
GGGGTTATCCGCTCCGTGGAGGAGGCCGCCAACGGCGAGCCAGCTGCACCGGCAGCAGAG
ACACCAACAGCTGCCTCGTAG

Peptide Sequence

PEP ID

EER93781
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:13355784:13364699:-1 gene:SORBI_3001G162200 transcript:EER93781 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAKDGGGGGFAKVLLLHVAALSTAGAVAAAAALARRRLTGGDRRKRKQQLQAPAAMPEMP
KLRVAESGRLEYLEKFSHYVARQLGFEEVKECPQLCKLANNYLNNSKTCMEDIYGFFSNA
KDAECLYVKLIEELDRCILGYFAFHWDHATYLISSALTADTGTKKNWRNVILEATRKQRF
ERVTRDLKVTRVFSTLVEEMKAIGVAPSSSSSSSSSSSQCTEVMAPVAHSERSPVLLLMG
GGMGAGKSTVLKEIKQEALWANAEGSNAAVVVEADAFKETDVIYRAISSMLGHHNDMLQT
AELVHQSSTDAASSLLVTALNEGRDVILDGTLSWEPYVEQTIAMARAVHRQRYRMGVGYK
VADDGTATETYWEPDDATDQPPSPGGGATTTTTRRPYRIEVVGVVCDAYLAVARGIRRAI
ITRRAVRVRSQLQSHKRFAAAFQRYSRLVDGARLYSTNSMGSARLIAWKDGVGSSLLVEP
REFDCLDKVSRLNEDATSVHDLYPDGTTTCGERSVWEDMVAAPARADTQRELKEAIRSVE
AGGGEPDTPPATTTHQRELLGVIRSVEEAANGEPAAPAAETPTAAS

Transcript Sequence

Transcript ID

EER93781
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:13355784:13364699:-1 gene:SORBI_3001G162200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCACCCCCAAAAAAAAAATAGAGATGGGATTTATATATTCACCTTCCTCTGTTACCTATA
TATACGGGCAGAGGCGGCGTCTGCTGGTATCGTGTGGTTTATGGGGTATAAGTAGTAGGT
GACCACGCCGTCCCTGTCGTGCGCTGCGAGAGCCTGGGAGTGGGGAGAGGCGCCATCATC
AGTCTGCCCACAGCCACAGCACTACATACCGGCATCGCCCTCCGCCTCCGGGACCGCGAC
CCGGAGGATTTGGTTCCACCCATCCGATCCCCTGTCTGATTCTGATTCTGATCCCCCTCC
CCCTGCTCGGGAGCAGAGCATCATCCGCCAGCCATGGCCAAAGATGGCGGCGGCGGTGGC
TTCGCCAAGGTGCTGCTGCTCCACGTCGCCGCGCTGTCGACGGCCGGCGCCGTCGCGGCC
GCCGCTGCCCTGGCGCGGCGCCGGCTCACGGGAGGAGACAGGAGGAAGAGGAAGCAGCAG
CTGCAGGCGCCGGCAGCCATGCCCGAAATGCCCAAGCTACGGGTGGCGGAGTCCGGCCGC
CTGGAGTACCTCGAGAAGTTCTCGCACTACGTGGCTAGGCAGCTGGGTTTCGAGGAGGTG
AAGGAGTGCCCACAGCTGTGCAAGTTGGCAAACAACTACCTGAACAACAGCAAGACGTGC
ATGGAGGACATTTACGGGTTTTTCTCCAACGCCAAGGACGCCGAGTGCCTTTACGTCAAG
CTCATCGAGGAGCTGGACAGATGCATCCTCGGATATTTTGCCTTCCACTGGGACCATGCT
ACCTATCTCATCAGCTCGGCGTTGACCGCGGACACCGGCACCAAAAAGAATTGGAGGAAC
GTGATCTTGGAAGCAACAAGGAAGCAGCGGTTCGAGCGCGTGACGCGTGACCTGAAGGTG
ACGCGGGTGTTCTCGACGCTGGTGGAAGAGATGAAGGCGATCGGCGTTGCGCCGTCGTCG
TCGTCGTCGTCGTCGTCGTCGTCGTCGCAGTGCACGGAGGTGATGGCCCCCGTGGCGCAC
TCGGAGCGCAGCCCGGTGCTGCTGCTGATGGGCGGCGGGATGGGCGCCGGGAAGAGCACG
GTGCTCAAGGAGATCAAGCAGGAGGCGTTGTGGGCCAACGCGGAGGGCAGCAACGCCGCC
GTGGTGGTGGAGGCCGACGCGTTCAAGGAGACGGACGTCATCTACCGCGCCATCAGCTCC
ATGCTGGGACACCACAACGACATGCTCCAGACGGCAGAGCTGGTGCACCAGTCGTCGACG
GACGCGGCGTCGTCGCTGCTGGTGACGGCGCTGAACGAGGGGCGGGACGTCATCCTGGAC
GGCACGCTGTCGTGGGAGCCCTACGTGGAGCAGACCATCGCCATGGCGCGCGCCGTGCAC
CGCCAGCGCTACCGCATGGGCGTCGGCTACAAGGTGGCCGACGACGGCACCGCCACCGAG
ACCTACTGGGAGCCCGACGACGCCACCGACCAACCGCCGTCGCCCGGCGGCGGGGCCACC
ACCACCACCACCAGGAGGCCGTACCGTATCGAGGTCGTCGGGGTGGTCTGCGACGCGTAC
CTCGCCGTGGCGCGGGGCATCCGGCGGGCCATCATCACGCGGCGCGCCGTCAGGGTGCGG
TCCCAGCTGCAGTCGCACAAGCGCTTCGCCGCCGCGTTCCAGCGGTACAGCCGCCTCGTC
GACGGCGCCAGGCTCTACAGCACCAACTCCATGGGCTCCGCCAGGCTCATCGCCTGGAAG
GACGGCGTCGGCAGCAGCCTGCTGGTGGAGCCCCGGGAGTTCGACTGCCTCGACAAGGTG
AGCAGGCTCAACGAGGACGCCACCTCCGTCCACGACCTCTACCCCGACGGCACCACCACC
TGCGGCGAGCGCTCCGTCTGGGAGGACATGGTCGCCGCGCCGGCGCGCGCCGACACGCAG
CGCGAGCTCAAGGAGGCCATCCGCTCCGTCGAGGCCGGCGGCGGCGAGCCTGACACGCCA
CCGGCGACGACGACGCACCAGCGCGAGCTCCTGGGGGTTATCCGCTCCGTGGAGGAGGCC
GCCAACGGCGAGCCAGCTGCACCGGCAGCAGAGACACCAACAGCTGCCTCGTAGCACTAC
GCAACATCGAGCTAGCCACCAACGGCGATCGACGATATTAATAATTGTCAAATGTTTGGG
GCTGCAACGAATAATATGGATTTGTGGTTTCTGATGAGTGTTTAAACTTGCTTCATTAAT
TTGATCACACAAAAGCATTCAGCTAGATAATCGGGGTTTTTTTTTCTTAACTCTGGTTTC
TGGTGTGGCCCAGCCGCCCAGGCACCCAGCAGCATATATGTATATCAAATTATGCTATAC
GGAAACGGAAGAATGTTGGAGCACTTCAGTTCAAATGGAGCGTTGCGACATTTGAGAATA
ACCCAAAGAAATGTGGCTTTAATTTAATCC