Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93779
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:13304908:13312799:-1 gene:SORBI_3001G161700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGGAAGGTACTACCAGGGGCAGGGCGGTGGCGGTGGCGGGGGCGCGTCCATGGAG
GTAGTCAGCACGCCGAACCAGGAGCTGGCGCTCACCAACTGCGCGTACATCTCCCCCGCG
GACCTCCGTCGCTTCCCCAACGGCCTCGCCCTCGTCGCCGACGCCTGGGTCTTCACCCTA
CGTGACCACAATGCTGTTGCAAGTGGGCGCATTGCCTTGAATGCTATTCAGCGTCGGCAG
GCGAAGGTTTCAGCTGGGGATTCTGTTACTGTTAGCAGTTTTGTCCCCCCTGATGATTTC
AAGTTGGCTTTGCTCACTTTAGAGCTAGAGTATGCCAAGGCAAGAGCCAACCGAAATGAC
GAGCTGGATGCTGTTGTGCTTGCCCAACAACTCCGTAAGAGGTTTCTGGATCAGGTCATG
ACCTCGGGGCAAAGGGTGCCTTTTGAATTTTATGGGACAAACTATGTGTTCACTGTCAAT
CAAGCTTTGTTAGAGGGTCAAGAGAGTTCTACACCATTGGATAGAGGATACTTGTCAAGT
GATACATACATCATATTTGAGGCTGCTCCTAATTCAGGAATTAAGGTGATCAACCAAAAG
GAAGCTGCTAGCAGCAAACTTTTCAAACATAAAGAGTTTAACCTGGAAAAATTGGGGATA
GGTGGGTTAAGTGCTGAATTCACTGACATATTTCGTAGGGCATTTGCTTCAAGAGTGTTT
CCTCCTCACGTTGTCAGTAAGTTGGGCATCAAGCATGTAAAGGGCATATTGCTATATGGA
CCTCCAGGTACTGGCAAGACTCTTATGGCCCGGCAAATTGGAAAGTTATTAAATGGAAAA
GATCCCAAGATTGTGAATGGACCTGAAGTTCTGAGCAAGTTTGTTGGAGAAACCGAGAAG
AATGTGAGAGATTTGTTTGCTGATGCTGAAAATGAGCAGAGGACACGAGGTGACCAGAGT
GACCTCCATGTTATCATATTTGATGAAATTGATGCCATCTGCAAGTCTAGAGGATCTACC
CGTGATGGTACAGGTGTACATGATAGCATTGTAAACCAGCTCCTTACAAAGATAGATGGT
GTTGAGGCGCTGAATAACGTATTGCTTATTGGAATGACCAATCGTAAAGATTTGCTCGAT
GAAGCTTTATTGAGACCTGGACGATTGGAAGTTCACATCGAGATAAACCTGCCTGATGAA
AATGGTCGTTTGCAAATCCTTCAGATTCATACAAATAAGATGAAAGAGAATTCTTTCCTA
TCTCCAGATATTAATCTTCATGAGCTAGCCGCACGGACAAAGAACTACAGTGGAGCGGAG
TTGGAAGGTGTTGTCAAAAGTGCTGTCTCGTATGCTTTGAACCGGCAGATAACCATGGAT
GACCTCACTAAACCTTTAGATGAGGAAAGCATTAAGGTTACTATGGATGATTTTGTGAAT
GCACTTCATGAAATTACTCCTGCATTTGGTGCTTCCACCGATGATCTCGAAAGATGCAGA
TTGCGAGGTATTGTTGATTGTGGCAAGGCACATAAGCATATTTACCAGAGAGCTATGCTC
CTTGTAGAGCAAGTTAAAGTTAGCAAAGGTAGTCCACTTGTGACTTGCCTCTTGGAAGGT
CCTGCTGGAAGTGGTAAAACAGCTATGGCAGCAAGTGTTGGCATTGACAGTGATTTTGCA
TATGTTAAAATTATATCAGCAGAAACAATGATTGGTTTCAGTGAGAGCAGCAAGTGTGCA
CAGATTTGCAAGGTTTTTGAGGATGCATACAAGTCTCAGTTCAGCATCATAATTCTTGAT
GATATCGAAAGGTTACTGGAGTATGTAGCCATTGGACCACGTTTTTCAAACTTGATCTCT
CAAACTCTTCTGGTCCTCCTCAAGAGGGTTCCTCCTAAGGGAAAAAACTTGCTTGTGATT
GGAACAACAAGCGAGGTTGGCTTCCTAGAATCTGTTGGAATGTGTGATGTGTTCTCTGTG
ACATACCATGTTCCCAAACTGAAAAAGGAGGATGCCAAAAAGGTATTGCATCGTCTTGAT
GTGTTCGATGATGGAGATCTTGATGCAGCAGCAGAAGCACTGGATGATATGCCAATCAAA
AAGCTGTACACACTTGTTGAGATGGCTGCACAGGGGCCAACCGGAGGAAGTGCAGAAGCA
ATTTATACCGGAGAGGACAAGATAGATATCAACCATTTCTTCAGCATCTTGAGTGATATT
ATCCGTTACTAA

Peptide Sequence

PEP ID

EER93779
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:13304908:13312799:-1 gene:SORBI_3001G161700 transcript:EER93779 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAGRYYQGQGGGGGGGASMEVVSTPNQELALTNCAYISPADLRRFPNGLALVADAWVFTL
RDHNAVASGRIALNAIQRRQAKVSAGDSVTVSSFVPPDDFKLALLTLELEYAKARANRND
ELDAVVLAQQLRKRFLDQVMTSGQRVPFEFYGTNYVFTVNQALLEGQESSTPLDRGYLSS
DTYIIFEAAPNSGIKVINQKEAASSKLFKHKEFNLEKLGIGGLSAEFTDIFRRAFASRVF
PPHVVSKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGKDPKIVNGPEVLSKFVGETEK
NVRDLFADAENEQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDG
VEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKENSFL
SPDINLHELAARTKNYSGAELEGVVKSAVSYALNRQITMDDLTKPLDEESIKVTMDDFVN
ALHEITPAFGASTDDLERCRLRGIVDCGKAHKHIYQRAMLLVEQVKVSKGSPLVTCLLEG
PAGSGKTAMAASVGIDSDFAYVKIISAETMIGFSESSKCAQICKVFEDAYKSQFSIIILD
DIERLLEYVAIGPRFSNLISQTLLVLLKRVPPKGKNLLVIGTTSEVGFLESVGMCDVFSV
TYHVPKLKKEDAKKVLHRLDVFDDGDLDAAAEALDDMPIKKLYTLVEMAAQGPTGGSAEA
IYTGEDKIDINHFFSILSDIIRY

Transcript Sequence

Transcript ID

EER93779
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:13304908:13312799:-1 gene:SORBI_3001G161700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCTTCTTCGTCTTCGCGGAGCAGCAGCGAGACATCACACACGCGCCTGCACGATCTCCT
CCTGCCAGCGAGATCTCACCACCGCAGCGGCGCCGCGCCCATGGCGGGAAGGTACTACCA
GGGGCAGGGCGGTGGCGGTGGCGGGGGCGCGTCCATGGAGGTAGTCAGCACGCCGAACCA
GGAGCTGGCGCTCACCAACTGCGCGTACATCTCCCCCGCGGACCTCCGTCGCTTCCCCAA
CGGCCTCGCCCTCGTCGCCGACGCCTGGGTCTTCACCCTACGTGACCACAATGCTGTTGC
AAGTGGGCGCATTGCCTTGAATGCTATTCAGCGTCGGCAGGCGAAGGTTTCAGCTGGGGA
TTCTGTTACTGTTAGCAGTTTTGTCCCCCCTGATGATTTCAAGTTGGCTTTGCTCACTTT
AGAGCTAGAGTATGCCAAGGCAAGAGCCAACCGAAATGACGAGCTGGATGCTGTTGTGCT
TGCCCAACAACTCCGTAAGAGGTTTCTGGATCAGGTCATGACCTCGGGGCAAAGGGTGCC
TTTTGAATTTTATGGGACAAACTATGTGTTCACTGTCAATCAAGCTTTGTTAGAGGGTCA
AGAGAGTTCTACACCATTGGATAGAGGATACTTGTCAAGTGATACATACATCATATTTGA
GGCTGCTCCTAATTCAGGAATTAAGGTGATCAACCAAAAGGAAGCTGCTAGCAGCAAACT
TTTCAAACATAAAGAGTTTAACCTGGAAAAATTGGGGATAGGTGGGTTAAGTGCTGAATT
CACTGACATATTTCGTAGGGCATTTGCTTCAAGAGTGTTTCCTCCTCACGTTGTCAGTAA
GTTGGGCATCAAGCATGTAAAGGGCATATTGCTATATGGACCTCCAGGTACTGGCAAGAC
TCTTATGGCCCGGCAAATTGGAAAGTTATTAAATGGAAAAGATCCCAAGATTGTGAATGG
ACCTGAAGTTCTGAGCAAGTTTGTTGGAGAAACCGAGAAGAATGTGAGAGATTTGTTTGC
TGATGCTGAAAATGAGCAGAGGACACGAGGTGACCAGAGTGACCTCCATGTTATCATATT
TGATGAAATTGATGCCATCTGCAAGTCTAGAGGATCTACCCGTGATGGTACAGGTGTACA
TGATAGCATTGTAAACCAGCTCCTTACAAAGATAGATGGTGTTGAGGCGCTGAATAACGT
ATTGCTTATTGGAATGACCAATCGTAAAGATTTGCTCGATGAAGCTTTATTGAGACCTGG
ACGATTGGAAGTTCACATCGAGATAAACCTGCCTGATGAAAATGGTCGTTTGCAAATCCT
TCAGATTCATACAAATAAGATGAAAGAGAATTCTTTCCTATCTCCAGATATTAATCTTCA
TGAGCTAGCCGCACGGACAAAGAACTACAGTGGAGCGGAGTTGGAAGGTGTTGTCAAAAG
TGCTGTCTCGTATGCTTTGAACCGGCAGATAACCATGGATGACCTCACTAAACCTTTAGA
TGAGGAAAGCATTAAGGTTACTATGGATGATTTTGTGAATGCACTTCATGAAATTACTCC
TGCATTTGGTGCTTCCACCGATGATCTCGAAAGATGCAGATTGCGAGGTATTGTTGATTG
TGGCAAGGCACATAAGCATATTTACCAGAGAGCTATGCTCCTTGTAGAGCAAGTTAAAGT
TAGCAAAGGTAGTCCACTTGTGACTTGCCTCTTGGAAGGTCCTGCTGGAAGTGGTAAAAC
AGCTATGGCAGCAAGTGTTGGCATTGACAGTGATTTTGCATATGTTAAAATTATATCAGC
AGAAACAATGATTGGTTTCAGTGAGAGCAGCAAGTGTGCACAGATTTGCAAGGTTTTTGA
GGATGCATACAAGTCTCAGTTCAGCATCATAATTCTTGATGATATCGAAAGGTTACTGGA
GTATGTAGCCATTGGACCACGTTTTTCAAACTTGATCTCTCAAACTCTTCTGGTCCTCCT
CAAGAGGGTTCCTCCTAAGGGAAAAAACTTGCTTGTGATTGGAACAACAAGCGAGGTTGG
CTTCCTAGAATCTGTTGGAATGTGTGATGTGTTCTCTGTGACATACCATGTTCCCAAACT
GAAAAAGGAGGATGCCAAAAAGGTATTGCATCGTCTTGATGTGTTCGATGATGGAGATCT
TGATGCAGCAGCAGAAGCACTGGATGATATGCCAATCAAAAAGCTGTACACACTTGTTGA
GATGGCTGCACAGGGGCCAACCGGAGGAAGTGCAGAAGCAATTTATACCGGAGAGGACAA
GATAGATATCAACCATTTCTTCAGCATCTTGAGTGATATTATCCGTTACTAAGCTCGCAT
GGAGCCGAAATGGGACCCTAGGTGTCCAGTAGGAAGATGCACCTATGTTTCATCACCCCG
TGTGGCATCCTCACAGCGTGTAGAGTGGTTTGATGTGTTGTTTTTGTTTGATGCGCCGAC
CAGAGCTGTTGGATTTGATCATAGTCGAGCTACACGATATAGCATTTTTGTATTGTATGA
ATGACGATGTTTATACAGTTGATAACGGGATCCAGCTGTACACCTCAGGACAGAAATGAT
TATGATTCTACTTTTTAT