Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93689
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:11404334:11410737:-1 gene:SORBI_3001G142100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCCGTGGCGGAGCTCAAGGAGAAGCACGCCGCCGCGACGGCGTCGGTCAACTCC
CTGCGCGAGCGCCTCCGCCAGCGCCGGGAGACGCTCCTCGACACGGACGTGGCGAGGTAC
TCCAAGTCGCAGGGGAGGCTGCCGGTGAGCTTCAACCCGACGGATCTGGTCTGCTGCCGC
ACGCTGCAGGGCCATAGCGGAAAGGTATATTCTCTGGATTGGACCCCTGAAAAGAATTGG
ATAGTCAGTGCCTCTCAAGATGGAAGGTTAATTGTGTGGAATGCATTGACAAGCCAGAAA
ACGCATGCCATAAAGCTGCATTGCCCATGGGTGATGACGTGTGCTTTTGCACCCAATGGA
CAATCTGTTGCCTGTGGTGGTCTTGATAGCGCGTGCTCTATTTTCAATCTCAACTCTCAA
GCAGACAGAGATGGGAACATGCCAGTATCAAGAATTCTTACTGGACACAAGGGCTATGTT
TCGTCATGCCAATATGTCCCAGATCAGGAAACTCGCCTTATTACTAGCTCCGGTGATCAG
ACATGTGTTCTTTGGGATGTTACTACTGGACAGAGGATCTCAATATTTGGAGGTGAATTT
CCATCAGGCCATACAGCTGATGTTCAAAGTGTGTCCATCAACTCATCAAATACGAATATG
TTTGTCTCTGGCTCATGTGATACAACTGTGAGGCTGTGGGATATCAGAATTGCAAGTCGA
GCTGTTCGAACCTACCATGGACATGAGGGCGACGTTAACAGTGTGAAGTTTTTTCCTGAT
GGCCATAGGTTTGGTACTGGCTCAGATGATGGCACATGTAGATTATTTGATATGAGAACA
GGGCACCAACTTCAGGTGTACAGTAGGGTGCCTGATAGAAATGATGATGAACTACCTACT
GTTACATCTATTGCATTTTCGATATCAGGAAGGCTACTTTTTGCTGGTTACTCCAATGGT
GACTGTTATGTGTGGGACACACTTCTTGCCGAGGTGGTACTTAATTTGGGGAATCTGCAA
AACTCCCATGATGGTCGTATAAGTTGCCTTGGGATGTCATCTGATGGGAGTGCATTGTGT
ACAGGGAGTTGGGACAAAAATTTGAAGATTTGGGCCTTCAGTGGACACCGGAAAATAGTT
TGA

Peptide Sequence

PEP ID

EER93689
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:11404334:11410737:-1 gene:SORBI_3001G142100 transcript:EER93689 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASVAELKEKHAAATASVNSLRERLRQRRETLLDTDVARYSKSQGRLPVSFNPTDLVCCR
TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMTCAFAPNG
QSVACGGLDSACSIFNLNSQADRDGNMPVSRILTGHKGYVSSCQYVPDQETRLITSSGDQ
TCVLWDVTTGQRISIFGGEFPSGHTADVQSVSINSSNTNMFVSGSCDTTVRLWDIRIASR
AVRTYHGHEGDVNSVKFFPDGHRFGTGSDDGTCRLFDMRTGHQLQVYSRVPDRNDDELPT
VTSIAFSISGRLLFAGYSNGDCYVWDTLLAEVVLNLGNLQNSHDGRISCLGMSSDGSALC
TGSWDKNLKIWAFSGHRKIV

Transcript Sequence

Transcript ID

EER93689
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:11404334:11410737:-1 gene:SORBI_3001G142100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTCACACACTGCCCCAACCTCTCCCCACCTCCCTCCACCCTGTCAGTTTCCCGTCGTCGT
CGCCGCCACCGCCGCCGCCTCTCCTCCTAGTCCTAGTCCCGCAGCCTCCTCCGTGGGGAG
CTCCCCCCTACCATACCCGCAGCCATTGGAATTTCCGCTCCATGCGTGGATCCTCGTAGA
TCCCCACCCGCGTGCACTCGAATCCCGAGGCGGCGGCGGTCTCCGTCGCGAGGCTAGGCC
AGCGGGCCGCACCCATGGCGTCCGTGGCGGAGCTCAAGGAGAAGCACGCCGCCGCGACGG
CGTCGGTCAACTCCCTGCGCGAGCGCCTCCGCCAGCGCCGGGAGACGCTCCTCGACACGG
ACGTGGCGAGGTACTCCAAGTCGCAGGGGAGGCTGCCGGTGAGCTTCAACCCGACGGATC
TGGTCTGCTGCCGCACGCTGCAGGGCCATAGCGGAAAGGTATATTCTCTGGATTGGACCC
CTGAAAAGAATTGGATAGTCAGTGCCTCTCAAGATGGAAGGTTAATTGTGTGGAATGCAT
TGACAAGCCAGAAAACGCATGCCATAAAGCTGCATTGCCCATGGGTGATGACGTGTGCTT
TTGCACCCAATGGACAATCTGTTGCCTGTGGTGGTCTTGATAGCGCGTGCTCTATTTTCA
ATCTCAACTCTCAAGCAGACAGAGATGGGAACATGCCAGTATCAAGAATTCTTACTGGAC
ACAAGGGCTATGTTTCGTCATGCCAATATGTCCCAGATCAGGAAACTCGCCTTATTACTA
GCTCCGGTGATCAGACATGTGTTCTTTGGGATGTTACTACTGGACAGAGGATCTCAATAT
TTGGAGGTGAATTTCCATCAGGCCATACAGCTGATGTTCAAAGTGTGTCCATCAACTCAT
CAAATACGAATATGTTTGTCTCTGGCTCATGTGATACAACTGTGAGGCTGTGGGATATCA
GAATTGCAAGTCGAGCTGTTCGAACCTACCATGGACATGAGGGCGACGTTAACAGTGTGA
AGTTTTTTCCTGATGGCCATAGGTTTGGTACTGGCTCAGATGATGGCACATGTAGATTAT
TTGATATGAGAACAGGGCACCAACTTCAGGTGTACAGTAGGGTGCCTGATAGAAATGATG
ATGAACTACCTACTGTTACATCTATTGCATTTTCGATATCAGGAAGGCTACTTTTTGCTG
GTTACTCCAATGGTGACTGTTATGTGTGGGACACACTTCTTGCCGAGGTGGTACTTAATT
TGGGGAATCTGCAAAACTCCCATGATGGTCGTATAAGTTGCCTTGGGATGTCATCTGATG
GGAGTGCATTGTGTACAGGGAGTTGGGACAAAAATTTGAAGATTTGGGCCTTCAGTGGAC
ACCGGAAAATAGTTTGAAGGACAACTTTTCTCCCCCATGTTGTATGTTCCTTGTCATGCC
TTAACAATGGACAATGGTGATCAGTGATCGACTCAGACTTGTTCCTGGGAATCCCCTTCT
TGTTTTTGTAGTATAGAATCTTGTGCACTACGCCCTATGTTTAATGGAAAAAAGTGCAAT
TTGTCTTGGCGCTACATCTTGTTGAGTTAGTAACTGTTTATACTGTTATTACAAGAATAT
CAGTAACGTGTGATCTGCCCTTTCTTTGTACAACCATTTTACTTTTCAGATTTAGATAAG
TAGCATGTATATTCTGGAATCAGTTTATCATATCAGTTTGCCCATTTGCTGAATTAGGAA
CATTAGCTTCCCGTGACGTACTATGCGTTTTGTGTTAGTAATGTTGCTTTCTTTTCTTAA
TAAGTTAAAGTCATTATTTGTGGATTGGGTCGAGTCACATTTTTCATCCATTTATTACTA
TTTGATATATC