Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93617
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:9988862:9992381:-1 gene:SORBI_3001G127200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAACGGCATGCCGATCTCTGCGTCCTCTGCGGCAGGCGTCGACGGCGGCGCGGTGGCG
GCCGGCACGCCCATGAAGAATGCGACAGCGGCGGCTGCTGTCGCCGAGATGGCGAGGCAT
CTCACCGTCGACACGGAAGACGCCTTCGCAGGCCTGCTGGAGTTCGCCGCTGACGACAAC
GCGGAGGGGCTGCGCCGCGCGCTGGAGCGCGCGCCGCCTGCCGCCGCGGACGAGGCCGGC
CTCTGGTACGGCCGCCGGAAGGTCCTGGAGCACCGCACCCCGCTAATGGTCGCCGCCACC
TATGGGAGCCTTGCTGCGCTCCGACTGCTGGTGTCCCTCCCGTCTGTTGACGTCAACCGC
CGCTCGGGCACGGACGGCACCACTGCCCTCCACTGCGCCGCCTCTGGTGGCTCACGGACG
GCGGTTGAGGCCGTGAAGCTGCTGCTGGGAGCGGGGGCAGACGCTGACACCATGGATGAC
GCTGGGCGCCGTCCGGCTGATGTGATCTCTGTGCCACCGAAGATGTTCGACGCCAAGTTC
GCCCTTCAAGATCTTCTTGGATTCCCCAAGTCTGAGCATGGCATGCTACGGGTGGTGACA
AGGTCCACCAACTCAATCTCATCGCCCGTTTCATCCCCCACTGCAGAGGATGCACGGTCA
CCGTCTGCTTCTGTGATGATGATTTCAAAGTTTGGTGACTTGCCTAGGGTTGCGACATCG
GAGAAGAAGGAATACCCAGTGGATCCGTCCCTTCCAGACATCAAGAACAGCATCTATGCT
TCCGATGAATTCCGCATGTACTCGTTCAAGATCCGCCCTTGCTCACGGGCGTACTCGCAT
GACTGGACTGAGTGCCCCTTTGTCCACCCAGGAGAGAATGCTCGACGCCGAGACCCCCGC
AAGTACCACTACAGTTGTGTGCCATGCCCAGATTTCAGGAAGGGCGTGTGCAGGCGCGGA
GATATGTGTGAGTATGCTCATGGAGTGTTCGAGTGCTGGCTCCATCCAGCGCAGTATCGG
ACACGCCTATGCAAGGATGGTACAAGCTGTAACCGCCGCGTCTGTTTCTTTGCCCACACA
ACTGATGAACTCCGGCCATTGTATGTCTCCACTGGATCAGCAGTGCCATCCCCAAGGGCT
TCTGCAACAGCTGCTATGGAGATGGCTGCAGCAATGGGCTTAATGCCTGGTTCCCCGTCA
TCGGTTTCAGCGGTAATGTCCCCATTTACCCCACCAATGTCGCCTTCGGGCAATGGGATG
CCCCCTTCGTTGGGTTGGCAGCAGCCAAATGTTCCAACATTACACCTTCCAGGCAGCAGC
CTTCAGTCAAGCAGGCTTCGAACATCACTTAGTGCAAGGGATATGCCTGCTGATGACTAC
TCCATGATGCCAGATCTTGATTCCCAACTTATGAATGATCTGTGCTATTCCCGTCTCAGT
TCATCCACAGGGAACCACTCTGCTCGGACCAAGTCCCTGAATCCATCAAACCTGGATGAT
CTCTTCTCTGCTGAAATGGTCTCATCCCCGAGGTATAGTAATGCTGACCAGGGTGCTATG
TTTTCACCTTCTCACAAGGCTGCTATTCTGAATCAGTTCCAGCAGCAGCAGCAAGCACTG
CTTTCTCCAATCAACACAGGAGTTTACTCTCCAAAGGCAGACAACCAGCAGTTACCTTCA
CACTCATCTCTGCTGCAAGCATCACTTGGGATGTCCTCCCCTGGCCGGATGTCTCCACGA
TGTGTTGAATCAGGCTCCCCAATGAACTCCCACCTAGCTGCTGCTCTTGTCCAGCGTGAG
AAACAACAGCAGACAATGAGAAGTCTCAGTTCTCGTGACCTTGGGCCTAGTGCGGCACGA
GCTTCAGCTCTCGGCTCCCCTCTAAGCTCATCATGGTCTAAGTGGGGATCTCCTTCAGGG
ACACCAGATTGGGGCGTAAATGGTGAAGAATTGGGTAAGCTCCGCCGCTCATCGTCCTTT
GAGCTGAGGTCTGGTGGTGATGACCCTGATCTCTCTTGGGTGCATACACTGGTTAAGGAA
TCTCCACCAGAGAAGCAAGTTACTACAGCTGAATCAATTAATTCTGTTGGACCCTCACCC
CTAATGCCTCCCGGCATGAACAGCGGCGAAGGTTCTGGTCTGAACACCCAGCTGGATGCA
CATGACCAAGCCGCAGTTATAGGAGCATTGCTTGAACAGATGCAGCTTGATCAGCAGATT
GGTAGTCTAGCAACATAG

Peptide Sequence

PEP ID

EER93617
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:9988862:9992381:-1 gene:SORBI_3001G127200 transcript:EER93617 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MNGMPISASSAAGVDGGAVAAGTPMKNATAAAAVAEMARHLTVDTEDAFAGLLEFAADDN
AEGLRRALERAPPAAADEAGLWYGRRKVLEHRTPLMVAATYGSLAALRLLVSLPSVDVNR
RSGTDGTTALHCAASGGSRTAVEAVKLLLGAGADADTMDDAGRRPADVISVPPKMFDAKF
ALQDLLGFPKSEHGMLRVVTRSTNSISSPVSSPTAEDARSPSASVMMISKFGDLPRVATS
EKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPR
KYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHT
TDELRPLYVSTGSAVPSPRASATAAMEMAAAMGLMPGSPSSVSAVMSPFTPPMSPSGNGM
PPSLGWQQPNVPTLHLPGSSLQSSRLRTSLSARDMPADDYSMMPDLDSQLMNDLCYSRLS
SSTGNHSARTKSLNPSNLDDLFSAEMVSSPRYSNADQGAMFSPSHKAAILNQFQQQQQAL
LSPINTGVYSPKADNQQLPSHSSLLQASLGMSSPGRMSPRCVESGSPMNSHLAAALVQRE
KQQQTMRSLSSRDLGPSAARASALGSPLSSSWSKWGSPSGTPDWGVNGEELGKLRRSSSF
ELRSGGDDPDLSWVHTLVKESPPEKQVTTAESINSVGPSPLMPPGMNSGEGSGLNTQLDA
HDQAAVIGALLEQMQLDQQIGSLAT

Transcript Sequence

Transcript ID

EER93617
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:9988862:9992381:-1 gene:SORBI_3001G127200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTCAGTCCCACTTCCCCGCTTCTAGAGTCTAGTCCTCTCTTTTCAGTTTCTCGCTCCCCA
CTTTCCCCATTTTTACCGCACCTCTCTCTTTCTCTCTCCTCCCTCGGCGTCTCGCACACC
CCAGCAGCTTCGTCTCCCCTCCCCTTCCTCCGCCCCAACAATCGGAACCGGATAGATAGA
TCGGCCCTATCTTTGCCTCCTCCCGGACGACTCGGCGCAAGGTCGCAGCTTTTCTCTCGA
TCTTTCGCGCTTCCCCGTTTTGACGCCTGCTCCCCATGGGGATTCTGGAGATCTTCGGGG
CGGTTCGCTGCTGAGATGGTTCGCCGCATCACGCGCTTCTGTGACTCTCAACAGGTAGGC
TTCCCTAGACTTTCCTCTTTCTTTACTCCGATCTGCTGCACGGAGCAGCTGGGGAGTACT
ATTCACTTGTCTTCTCTGGCCGCTTGAGAGCGTGAGCTCGGTGGAGGAGTCCTGATCTAG
CACAAGATTGGATTTTTGTGGGGTTGATTTGAGGTGTTTTTTTCTTGCGCGATTTGGTGG
TGTGGGCTTTCTTCCTTCCATTTATGTAGCATCCGTCTTCTGTGCTGCTTCCGATTTTGT
GGGATTTCTAGTCCATATCTCGCACCAGTGATGACTTGCTTGACTAGCTTCTTGACTGGT
TTCCTGTTGTTCTGTTTCTCATCGTTGCTTCAGTTCTTCCGATCCGAGGATCCCCGGTGA
TGAACGGCATGCCGATCTCTGCGTCCTCTGCGGCAGGCGTCGACGGCGGCGCGGTGGCGG
CCGGCACGCCCATGAAGAATGCGACAGCGGCGGCTGCTGTCGCCGAGATGGCGAGGCATC
TCACCGTCGACACGGAAGACGCCTTCGCAGGCCTGCTGGAGTTCGCCGCTGACGACAACG
CGGAGGGGCTGCGCCGCGCGCTGGAGCGCGCGCCGCCTGCCGCCGCGGACGAGGCCGGCC
TCTGGTACGGCCGCCGGAAGGTCCTGGAGCACCGCACCCCGCTAATGGTCGCCGCCACCT
ATGGGAGCCTTGCTGCGCTCCGACTGCTGGTGTCCCTCCCGTCTGTTGACGTCAACCGCC
GCTCGGGCACGGACGGCACCACTGCCCTCCACTGCGCCGCCTCTGGTGGCTCACGGACGG
CGGTTGAGGCCGTGAAGCTGCTGCTGGGAGCGGGGGCAGACGCTGACACCATGGATGACG
CTGGGCGCCGTCCGGCTGATGTGATCTCTGTGCCACCGAAGATGTTCGACGCCAAGTTCG
CCCTTCAAGATCTTCTTGGATTCCCCAAGTCTGAGCATGGCATGCTACGGGTGGTGACAA
GGTCCACCAACTCAATCTCATCGCCCGTTTCATCCCCCACTGCAGAGGATGCACGGTCAC
CGTCTGCTTCTGTGATGATGATTTCAAAGTTTGGTGACTTGCCTAGGGTTGCGACATCGG
AGAAGAAGGAATACCCAGTGGATCCGTCCCTTCCAGACATCAAGAACAGCATCTATGCTT
CCGATGAATTCCGCATGTACTCGTTCAAGATCCGCCCTTGCTCACGGGCGTACTCGCATG
ACTGGACTGAGTGCCCCTTTGTCCACCCAGGAGAGAATGCTCGACGCCGAGACCCCCGCA
AGTACCACTACAGTTGTGTGCCATGCCCAGATTTCAGGAAGGGCGTGTGCAGGCGCGGAG
ATATGTGTGAGTATGCTCATGGAGTGTTCGAGTGCTGGCTCCATCCAGCGCAGTATCGGA
CACGCCTATGCAAGGATGGTACAAGCTGTAACCGCCGCGTCTGTTTCTTTGCCCACACAA
CTGATGAACTCCGGCCATTGTATGTCTCCACTGGATCAGCAGTGCCATCCCCAAGGGCTT
CTGCAACAGCTGCTATGGAGATGGCTGCAGCAATGGGCTTAATGCCTGGTTCCCCGTCAT
CGGTTTCAGCGGTAATGTCCCCATTTACCCCACCAATGTCGCCTTCGGGCAATGGGATGC
CCCCTTCGTTGGGTTGGCAGCAGCCAAATGTTCCAACATTACACCTTCCAGGCAGCAGCC
TTCAGTCAAGCAGGCTTCGAACATCACTTAGTGCAAGGGATATGCCTGCTGATGACTACT
CCATGATGCCAGATCTTGATTCCCAACTTATGAATGATCTGTGCTATTCCCGTCTCAGTT
CATCCACAGGGAACCACTCTGCTCGGACCAAGTCCCTGAATCCATCAAACCTGGATGATC
TCTTCTCTGCTGAAATGGTCTCATCCCCGAGGTATAGTAATGCTGACCAGGGTGCTATGT
TTTCACCTTCTCACAAGGCTGCTATTCTGAATCAGTTCCAGCAGCAGCAGCAAGCACTGC
TTTCTCCAATCAACACAGGAGTTTACTCTCCAAAGGCAGACAACCAGCAGTTACCTTCAC
ACTCATCTCTGCTGCAAGCATCACTTGGGATGTCCTCCCCTGGCCGGATGTCTCCACGAT
GTGTTGAATCAGGCTCCCCAATGAACTCCCACCTAGCTGCTGCTCTTGTCCAGCGTGAGA
AACAACAGCAGACAATGAGAAGTCTCAGTTCTCGTGACCTTGGGCCTAGTGCGGCACGAG
CTTCAGCTCTCGGCTCCCCTCTAAGCTCATCATGGTCTAAGTGGGGATCTCCTTCAGGGA
CACCAGATTGGGGCGTAAATGGTGAAGAATTGGGTAAGCTCCGCCGCTCATCGTCCTTTG
AGCTGAGGTCTGGTGGTGATGACCCTGATCTCTCTTGGGTGCATACACTGGTTAAGGAAT
CTCCACCAGAGAAGCAAGTTACTACAGCTGAATCAATTAATTCTGTTGGACCCTCACCCC
TAATGCCTCCCGGCATGAACAGCGGCGAAGGTTCTGGTCTGAACACCCAGCTGGATGCAC
ATGACCAAGCCGCAGTTATAGGAGCATTGCTTGAACAGATGCAGCTTGATCAGCAGATTG
GTAGTCTAGCAACATAGGTGCACAATGAGCCTGGAAGGTGTGAGGATACTATATTCTTAT
CTAATGAATTCCAAGTTCTTTTTCCCTGTCAATTAAGGTATTCAACAAAGATGGATTGCT
GAAGGTGGTGATTCAGAGATTGGTTTTCTTTAATTTTGGAGGTAAATCATATACATTATT
GAGGTTCCAGTAGGTTAAAGAGTGAAGTTCCTCAGGTTGGGGTTGTTCCATGGCCAACCC
AGGTAGAATCGCACCCCGGCAGCATCAGTTCATCGATTGGAGTTCTCTATTTTGTTAATT
AACCCTGTTAAGAAAAGAAGGCTTGTTCGCCGTGTCGGAATTCTTTCCTTTTCCCTAGTG
TTGTTTATTTTGTTCATTATTATGATATCGATACTTGATGTACTGATGGTGTAAGTGGTT
ACTTGGGATCCTATAGTAGCTCTGCCAAGTTGAAAGGTATTTTTTTTCACCCTTTACCAT
TTGTCGTGGATTATCTTGTGGCCTTGTTTTGGTTAGACCTTGAGGCCTGCATAATCCTCC
TGGATGATATTTGCAATAATGTAATATTGTTTTTGAACTT