Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93615
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:9946331:9952986:-1 gene:SORBI_3001G126600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGAAGCACTACCGCCCTGCGGGTAAGAAGAAGGAGGGGAATGCGGCAAAGTACATC
ACGAGGACCAAGGCGGTCAACTACCTGCAAGTTAGCCTCGCAATCTTCAGGAAGCTATGC
ATTCTAAAGGGTGTCTTTCCGCGGCAGCCAAAGAAGAAGGTGGAAGGGAACCACAAGACC
TACTACCACACGAAGGATATTGCATTCCTTGCTCATGACCCTTTGATCGAGAAGTTCAGG
GAGATTAAGGTCCATCGAAGGAAGGTTAAAAAGGCTGTTGCTAAGAAAAACAGGGATCTC
GCAGACAGGCTGTTGAATCGGCCACCAACTTACAAACTTGATAGGCTTGTCCTTGAAAGG
TATCCAACATTTGTTGATGCTCTTCGTGACTTGGATGACTGCCTTACAATGGTGCATCTG
TTTGCGGCATTACCTGCTGTTGATGGTGAACGCGTTGAAGTCAAACGAATTCATAACTGC
CGCAGGTTAAGCCATGAATGGCAAGCATACATATCCCGAACTCATTCCCTGAGGAAGACA
TTTATTTCCGTCAAGGGCATATATTTCCAGGCTGAAGTTCAAGGACAAAAGATCACCTGG
CTAACCCCTCATGCTCTTCAGCAAGTATTAACCGATGATGTTGATTTCAATGTGATGCTC
TCTTTTCTAGAATTCTATGAGACTCTTTTAGGATTTGTGAACTTCAAGCTCTATCATTCA
ATAAATGTAAATTATCCTCCTATTCTGGATCCACGTCTGGAAGCTTTAGCTGCTGAGCTC
TATGCATTGTGCCGATACATGTCTGCTGGTTCCAGAAGAATGATTGGGAATTCACAATCT
GACGAAGTAATGGAGGATAAGGATGAGAAGAGTAAAGCTGATGGAATAACTGAGGAAGAG
AAGGATGTGAAGAATAAAGCAAGCTCAAAAGCAGATGAATCTGAGCTCAGATTAGCACAG
CTTCAACATCAGCTCCCAACTAATGAACCTGGTGCACTGATGAATCTTGTAGAAGAATCA
ACTGCTGATGATGCAGATGATGACGATACTAAAGAATGTAAAGGTTTATTTAAGAACTTA
AAGTTCTACCTGAGTCGGGAGGTGCCTAGGGAGTCTCTATTATTTATTATCCCAGCATTT
GGAGGGACTGTTTCATGGGAAGGAGAAGGAGCTCCATTTAAAGAAGTAGATGAAGATATC
ACCCACCAGATTGTTGATAGGCCGACACAAAGCCATGTTTTCCTCTCCAGGGAGTATGTT
CAACCGCAGTGGGTCTTTGATTGTGTAAACGCTCGTATCATATTGCCAACAGAAGGTTAT
CTTGTTGGAAGAGTACCTCCACCACATTTGTCTCCTTTTGTGGACAATGATGCAGAGGGC
TACATTCCTGAGTATGCAGAAACAATAAAGAGGCTGCAAGCTGCTGCTCGCAATGAGGTC
TTGCCTCTTCCTGGTATTGGTGATGAAGATCTAGACAATTCATTGGTAGCAGCAATGATG
GATCGAACAGAATCTAACGAAGCTGCTGAAAAGAAGAGGAAGTTGGAGATGCTAGAGAAG
CAATACCATGATGAACTGAAGATGGAAATTGACGGTGTTGCTTTCTCTAGTCTGTCAAAT
AAGGAAGCAAATAAATCACCAGATGCCAAAGATGATACTCAGTCAGATCACGAGGCGGAT
GCCATTAAACAAGAGGAGAAGGATGATGATGACATTGGTACTGCTCTCATGTCTCGCAAG
CAGCAAGGCCTTTATAAAGCTATGAAGATGGGCAAAGAAAAGAAAAAAGAGAAAATTGAG
CTACTTAAGAAGAGGAAAAAGAATGCGGATTCTAGTGCTTCTTCCAAGAAGCGGCACTGA

Peptide Sequence

PEP ID

EER93615
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:9946331:9952986:-1 gene:SORBI_3001G126600 transcript:EER93615 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPKHYRPAGKKKEGNAAKYITRTKAVNYLQVSLAIFRKLCILKGVFPRQPKKKVEGNHKT
YYHTKDIAFLAHDPLIEKFREIKVHRRKVKKAVAKKNRDLADRLLNRPPTYKLDRLVLER
YPTFVDALRDLDDCLTMVHLFAALPAVDGERVEVKRIHNCRRLSHEWQAYISRTHSLRKT
FISVKGIYFQAEVQGQKITWLTPHALQQVLTDDVDFNVMLSFLEFYETLLGFVNFKLYHS
INVNYPPILDPRLEALAAELYALCRYMSAGSRRMIGNSQSDEVMEDKDEKSKADGITEEE
KDVKNKASSKADESELRLAQLQHQLPTNEPGALMNLVEESTADDADDDDTKECKGLFKNL
KFYLSREVPRESLLFIIPAFGGTVSWEGEGAPFKEVDEDITHQIVDRPTQSHVFLSREYV
QPQWVFDCVNARIILPTEGYLVGRVPPPHLSPFVDNDAEGYIPEYAETIKRLQAAARNEV
LPLPGIGDEDLDNSLVAAMMDRTESNEAAEKKRKLEMLEKQYHDELKMEIDGVAFSSLSN
KEANKSPDAKDDTQSDHEADAIKQEEKDDDDIGTALMSRKQQGLYKAMKMGKEKKKEKIE
LLKKRKKNADSSASSKKRH

Transcript Sequence

Transcript ID

EER93615
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:9946331:9952986:-1 gene:SORBI_3001G126600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTTCTTCAGCCCAAGTGCCAAAGCCGCCTCGTCCCGCCGGCATATAAACCAAAACCCTAA
AACCCATCTACTCCTCTCTTTTCCCCTCCCTTTCCCGGCACGGGGAGCGACCTCCGCCGC
CGCCGCCATGCCGAAGCACTACCGCCCTGCGGGTAAGAAGAAGGAGGGGAATGCGGCAAA
GTACATCACGAGGACCAAGGCGGTCAACTACCTGCAAGTTAGCCTCGCAATCTTCAGGAA
GCTATGCATTCTAAAGGGTGTCTTTCCGCGGCAGCCAAAGAAGAAGGTGGAAGGGAACCA
CAAGACCTACTACCACACGAAGGATATTGCATTCCTTGCTCATGACCCTTTGATCGAGAA
GTTCAGGGAGATTAAGGTCCATCGAAGGAAGGTTAAAAAGGCTGTTGCTAAGAAAAACAG
GGATCTCGCAGACAGGCTGTTGAATCGGCCACCAACTTACAAACTTGATAGGCTTGTCCT
TGAAAGGTATCCAACATTTGTTGATGCTCTTCGTGACTTGGATGACTGCCTTACAATGGT
GCATCTGTTTGCGGCATTACCTGCTGTTGATGGTGAACGCGTTGAAGTCAAACGAATTCA
TAACTGCCGCAGGTTAAGCCATGAATGGCAAGCATACATATCCCGAACTCATTCCCTGAG
GAAGACATTTATTTCCGTCAAGGGCATATATTTCCAGGCTGAAGTTCAAGGACAAAAGAT
CACCTGGCTAACCCCTCATGCTCTTCAGCAAGTATTAACCGATGATGTTGATTTCAATGT
GATGCTCTCTTTTCTAGAATTCTATGAGACTCTTTTAGGATTTGTGAACTTCAAGCTCTA
TCATTCAATAAATGTAAATTATCCTCCTATTCTGGATCCACGTCTGGAAGCTTTAGCTGC
TGAGCTCTATGCATTGTGCCGATACATGTCTGCTGGTTCCAGAAGAATGATTGGGAATTC
ACAATCTGACGAAGTAATGGAGGATAAGGATGAGAAGAGTAAAGCTGATGGAATAACTGA
GGAAGAGAAGGATGTGAAGAATAAAGCAAGCTCAAAAGCAGATGAATCTGAGCTCAGATT
AGCACAGCTTCAACATCAGCTCCCAACTAATGAACCTGGTGCACTGATGAATCTTGTAGA
AGAATCAACTGCTGATGATGCAGATGATGACGATACTAAAGAATGTAAAGGTTTATTTAA
GAACTTAAAGTTCTACCTGAGTCGGGAGGTGCCTAGGGAGTCTCTATTATTTATTATCCC
AGCATTTGGAGGGACTGTTTCATGGGAAGGAGAAGGAGCTCCATTTAAAGAAGTAGATGA
AGATATCACCCACCAGATTGTTGATAGGCCGACACAAAGCCATGTTTTCCTCTCCAGGGA
GTATGTTCAACCGCAGTGGGTCTTTGATTGTGTAAACGCTCGTATCATATTGCCAACAGA
AGGTTATCTTGTTGGAAGAGTACCTCCACCACATTTGTCTCCTTTTGTGGACAATGATGC
AGAGGGCTACATTCCTGAGTATGCAGAAACAATAAAGAGGCTGCAAGCTGCTGCTCGCAA
TGAGGTCTTGCCTCTTCCTGGTATTGGTGATGAAGATCTAGACAATTCATTGGTAGCAGC
AATGATGGATCGAACAGAATCTAACGAAGCTGCTGAAAAGAAGAGGAAGTTGGAGATGCT
AGAGAAGCAATACCATGATGAACTGAAGATGGAAATTGACGGTGTTGCTTTCTCTAGTCT
GTCAAATAAGGAAGCAAATAAATCACCAGATGCCAAAGATGATACTCAGTCAGATCACGA
GGCGGATGCCATTAAACAAGAGGAGAAGGATGATGATGACATTGGTACTGCTCTCATGTC
TCGCAAGCAGCAAGGCCTTTATAAAGCTATGAAGATGGGCAAAGAAAAGAAAAAAGAGAA
AATTGAGCTACTTAAGAAGAGGAAAAAGAATGCGGATTCTAGTGCTTCTTCCAAGAAGCG
GCACTGATGCTCAGAGTTCGCTTCATAGCATTGGTGTGGCATCTCTAGTAGAATGTTGCC
ATGATCATCTTCGTGCCAAGTCCCTGTTATGAGTGGTTGTATTTTGATATCTCTCCTATG
TATGCTGAAGATGAGCTTAAGGAATATGTACCAGGAAACTTGAATTGGAAAAGTTTTGAT
CCGTCGTTATTATTGTGTATCAGGAAACTTGAACAGATAAATTTTGATCTCCTATGTATT
AAGCATTTAGAGTCGTTATTATTATTTTTGCCTGGATATATTGCTTGTCTTTTTTATATA
GAAAAGGTACAAGAATTATT