Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93589
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:9292330:9296767:-1 gene:SORBI_3001G119600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACTGCCTCCTCCTCCAGGCTCCTAAAGCTCACTCTGAGCTCCTATTTCCTCCGCTCC
TGCCGCATCGCTTCCAGCTCCCTACTCCCCACCACCTTCCGCGGCCACCCGGGGCCGCTC
CACTCCCTCCGCTTCTGCTCCGCGGTCCCCGCGGTTGTCGATGTCGCCGCCGACCCTGCC
GTGGCGGCTGTATCCGCCGGCCACCCGTGGCCGGAGTGGGGCGACTTCCTCGATAAGCTG
CGGGCCAAGGGGTACTTCGAGCAAGGCGTGCCCTCCTCCGGCGTGAGTTCTGGCGAGGGA
GCCGCCGGAGTTAGGGATGCTGCGGTTGCAGCTGCATCTGAGGACGCAGCAGCGGCTGCT
TCCGGTAACACTGTGGTGGCTGCGGTGGATAGCGCGGTGTCCTTGGAAGACATTTATCGT
TTCAGGGACGAGAACAGGGTGAAGAATGCTTGCCTCAAATTTGCGCGCGATCGCTTCGAT
CTCCTCAGCTCGCTTCCGAAGCAGGATATTCAAGCTATTGTCAAGTGTGGCTGTCCTAAT
AAAAATCGGAAGCCCGTCAATTCTGCAAAAAGGTTGAGAGAGTTTGTGCAGGTCAAAGAA
GAAGATGCATGCAGCATTTGCAAATTTCGTGAATCCTGTGATAAAGCTTTTATCACTCCA
GATGCCGAGGCTGAAGTTAAGACTGTTGATGTTGTTCGCATACTGCTAAGTTATGCAATG
GATAAAAACCTTTCAGGAGAAAACTCAGTTATCGAAAGCGTGCAAGAATCTGCAAAAAAG
CTTCTCTCAAAGCTTACTGAACTTAGCGACACAAAAATCGACGAGTCTCTTCCGAAACCT
GCATCTCAAGCTCCTAGGAAGGCTCAGGGCTCAGATGGGAAGGGGAGAGAAACGACGGCA
GTTGAAATGAAGAAGGGCGACTGGTTGTGCACTAACTGTAACTTCTTAAATTTTGCTCGC
AATGTTCGCTGTCGTGAATGCAAAGCAGATGGACCAAAGAAGATAGAAGTAGCCATGGCT
GAAATGAAAATGGGCGATTGGATCTGCACACAGTGTCAGTTTATGAACTTCTCTCGCAAC
AATATTTGTTTTAAATGTGAAGAACCTCGCCCGAAGAGGCAACTCAATCCTGGAGAGTGG
GAGTGCCCCTCATGTGACTATGTTAACTTCCGACGCAACATTTTGTGCAAGAAGTGCAAT
CAGGACCGGCCTGAGGATGATACCCAGGATAGTCAGCTGGGATTGAGAAAAACGAGAGGG
GCTGGCAAGAGTAGAAGATTCGACTATATTGATCAGAAGAGTGACAATGATTATGATGCC
TCTCCCTATGAAGGGTTCCGCAAGCGTGGGGCAAGCATGAGGAAACCGGACCAGAGAAGA
ACCACTGCCAGGAGCAGAGGCTTTGACGATCTGGAGGATGATTACAATGCCTCTCCCTAT
GAAGGGTTCCGCAAGCGTGGGGCAAGCATGAGGAAACCGGACCAGAGAAGAACCACTGCC
AAGAGCAGTGGCTTTGACGATCTGGAGGATGGTCTCCTTACTGCCAAGAGTAGAAGGGCT
AAGGAAGACGAGGATGACGAAGTCTTGCCGTACGAAGGTGTGCGCAAGCATGTTGTGAGC
AGAAGGGCAACGCCTTCTCAGAGGAGGTTCACGGCTGCCCGTAACCAGTAA

Peptide Sequence

PEP ID

EER93589
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:9292330:9296767:-1 gene:SORBI_3001G119600 transcript:EER93589 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTASSSRLLKLTLSSYFLRSCRIASSSLLPTTFRGHPGPLHSLRFCSAVPAVVDVAADPA
VAAVSAGHPWPEWGDFLDKLRAKGYFEQGVPSSGVSSGEGAAGVRDAAVAAASEDAAAAA
SGNTVVAAVDSAVSLEDIYRFRDENRVKNACLKFARDRFDLLSSLPKQDIQAIVKCGCPN
KNRKPVNSAKRLREFVQVKEEDACSICKFRESCDKAFITPDAEAEVKTVDVVRILLSYAM
DKNLSGENSVIESVQESAKKLLSKLTELSDTKIDESLPKPASQAPRKAQGSDGKGRETTA
VEMKKGDWLCTNCNFLNFARNVRCRECKADGPKKIEVAMAEMKMGDWICTQCQFMNFSRN
NICFKCEEPRPKRQLNPGEWECPSCDYVNFRRNILCKKCNQDRPEDDTQDSQLGLRKTRG
AGKSRRFDYIDQKSDNDYDASPYEGFRKRGASMRKPDQRRTTARSRGFDDLEDDYNASPY
EGFRKRGASMRKPDQRRTTAKSSGFDDLEDGLLTAKSRRAKEDEDDEVLPYEGVRKHVVS
RRATPSQRRFTAARNQ

Transcript Sequence

Transcript ID

EER93589
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:9292330:9296767:-1 gene:SORBI_3001G119600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTTTTGACTTTTCACACCCACAGTTTGACACCGTCAAAGCCTAATTTATTTAACGGTAGT
GGCATGAAAGGCAAAAAAAAAAAGAATAATAGCTTTGAAATCCGTTGAACTTTTTCAATG
ACTCACCAGGAATCACGATTTTTATAGTATCTCACAAGAAATTCTCTTTTTTTTTTTGAC
GAGGCAGTATCTTTGGCACTGTTTTTTCGTCGATTGAGATTGTCAAAGAGGGTTAGCAAC
GATCAGTAAGCCACAGAGTCTCAAAACCTCTTAAACCCTAATCCTCTCCATCCATTCCCC
TGCCCCCTACATGTTCGCCTGACCTTCACGGCCGCCGCTTCTCGTCCGCCATGACTGCCT
CCTCCTCCAGGCTCCTAAAGCTCACTCTGAGCTCCTATTTCCTCCGCTCCTGCCGCATCG
CTTCCAGCTCCCTACTCCCCACCACCTTCCGCGGCCACCCGGGGCCGCTCCACTCCCTCC
GCTTCTGCTCCGCGGTCCCCGCGGTTGTCGATGTCGCCGCCGACCCTGCCGTGGCGGCTG
TATCCGCCGGCCACCCGTGGCCGGAGTGGGGCGACTTCCTCGATAAGCTGCGGGCCAAGG
GGTACTTCGAGCAAGGCGTGCCCTCCTCCGGCGTGAGTTCTGGCGAGGGAGCCGCCGGAG
TTAGGGATGCTGCGGTTGCAGCTGCATCTGAGGACGCAGCAGCGGCTGCTTCCGGTAACA
CTGTGGTGGCTGCGGTGGATAGCGCGGTGTCCTTGGAAGACATTTATCGTTTCAGGGACG
AGAACAGGGTGAAGAATGCTTGCCTCAAATTTGCGCGCGATCGCTTCGATCTCCTCAGCT
CGCTTCCGAAGCAGGATATTCAAGCTATTGTCAAGTGTGGCTGTCCTAATAAAAATCGGA
AGCCCGTCAATTCTGCAAAAAGGTTGAGAGAGTTTGTGCAGGTCAAAGAAGAAGATGCAT
GCAGCATTTGCAAATTTCGTGAATCCTGTGATAAAGCTTTTATCACTCCAGATGCCGAGG
CTGAAGTTAAGACTGTTGATGTTGTTCGCATACTGCTAAGTTATGCAATGGATAAAAACC
TTTCAGGAGAAAACTCAGTTATCGAAAGCGTGCAAGAATCTGCAAAAAAGCTTCTCTCAA
AGCTTACTGAACTTAGCGACACAAAAATCGACGAGTCTCTTCCGAAACCTGCATCTCAAG
CTCCTAGGAAGGCTCAGGGCTCAGATGGGAAGGGGAGAGAAACGACGGCAGTTGAAATGA
AGAAGGGCGACTGGTTGTGCACTAACTGTAACTTCTTAAATTTTGCTCGCAATGTTCGCT
GTCGTGAATGCAAAGCAGATGGACCAAAGAAGATAGAAGTAGCCATGGCTGAAATGAAAA
TGGGCGATTGGATCTGCACACAGTGTCAGTTTATGAACTTCTCTCGCAACAATATTTGTT
TTAAATGTGAAGAACCTCGCCCGAAGAGGCAACTCAATCCTGGAGAGTGGGAGTGCCCCT
CATGTGACTATGTTAACTTCCGACGCAACATTTTGTGCAAGAAGTGCAATCAGGACCGGC
CTGAGGATGATACCCAGGATAGTCAGCTGGGATTGAGAAAAACGAGAGGGGCTGGCAAGA
GTAGAAGATTCGACTATATTGATCAGAAGAGTGACAATGATTATGATGCCTCTCCCTATG
AAGGGTTCCGCAAGCGTGGGGCAAGCATGAGGAAACCGGACCAGAGAAGAACCACTGCCA
GGAGCAGAGGCTTTGACGATCTGGAGGATGATTACAATGCCTCTCCCTATGAAGGGTTCC
GCAAGCGTGGGGCAAGCATGAGGAAACCGGACCAGAGAAGAACCACTGCCAAGAGCAGTG
GCTTTGACGATCTGGAGGATGGTCTCCTTACTGCCAAGAGTAGAAGGGCTAAGGAAGACG
AGGATGACGAAGTCTTGCCGTACGAAGGTGTGCGCAAGCATGTTGTGAGCAGAAGGGCAA
CGCCTTCTCAGAGGAGGTTCACGGCTGCCCGTAACCAGTAATAATACCCGAACTTGGAGC
TTTGATGACTCCGTTCTGTAACATATTTCACGGTTGCATACTTGGTTGAGCAACCATAAT
TTCATTATTCAGGCCATTACCATAACAATTGGATATATCTTTCTCAGAAGTATGACATTT
GTAATCTAGAAAGAATTTTGACAGCGTCGCTCGCTCTGCTGTGGTGCAGATGAGGGACAC
AAGCATGTTCGATTTGTAGTGTTATTATACAGATTATTAGGGAAACCACATTGATACAAC
TAGCTTTTTACAAGGATTTGTTTGTCGTCACTTCTGTGTGACGAGATATATGATGATCAT
GTTGAACTTGTTTTGCTTT