Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93494
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:7512285:7523599:-1 gene:SORBI_3001G097900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGACAGCCGATGGCGCCGCACCGCCGGCAATGGACGAGAAGGCGCGGCGCACGCGT
GACCTCCTTGCTAGCTTCTACAACACCGACCCGTCGGCGGCCGCCGGGGCCGCGGCCCCC
GCGTCCCTGGCGCGGCCGTCCCCTACAGCCGCGCCCGCATCGCCCCTCGACTCCATCAAC
TCCGCCTCCTTCGATCCCGACATCTACATGAATGTTCTGGTGCAGCAATCCAATCTGGAA
GGCCTTCTACAAAGGCATGTGAAGATGGCTGCTGAGATCAAGAACCTAGACACAGATTTA
CAGATGCTAGTGTATGAGAATTATAACAAGTTTATTAGTGCAACTGACACTATAAAAAGG
ATGAAGACTAACATTGTTGGGATGGAGACAAATATGGACCAGCTCCTTGCAAAGATAACA
TCAGTGCAATCAAAAAGCGACACAGTAAATACATCTCTTTTTGACAAAAGGGAAAACATC
GAGAAATTACATCGTACACGCAATCTGCTCCGGAAAGTTCAATTCATATATGACCTTCCA
ACTCGGCTTAACAAATGCATCAAGACCGAAGCATATGCAGATGCTGTCAGGTTTTTTACT
GGAGCAAAACCTATTTTTGAGGCCTATGGAGATACGTCTTTTCAAGACTGTAAAAAGGCA
TCCGAGGAGGCAATGGATTTAGTTATACAACACCTTCAGGCAAAGTTATACTCAGATTCT
GAACCTATTGAAGCAAGAGCAGAAGCTGTAGTTCTCCTTAAACAATTGAACTTTCCGGTG
GACAACTTAAAATCGAATCTACTTGAGAAGCTTGAAGATTGCCTCTTGAATTTCCAGAAT
GAGCCTACGCAGGCTTCAATTGGTGACATCTCAAAGACATTCCGTGCTTATTTAATAATA
TTTCCTGATTCGGAAAGGCGTCTCATTGAACTTGCACAAGCTTTGTTCTCAAACCGATAT
GAAACAGTCAGAGAGAATCTGAAGAAAAGAATTCCATCAACAGATCTGCTGGCAATACTA
CGATCCTTATGGGAGGATGCAACCGCCATCGATGAAGTTATTCCAGAGGCTGCGCTACCA
GCTTTTTCTTTGGAGACTACTCGAGACATTATTAGGCAACACATAGCAACTGCATTTCTC
CATCTTCAAAGTGAAATATCAGAGGCACTGGTTAGGACACGTTCAACATCAAATGAGAAG
TTAGAAGAGTCACAGCTGCAAACTGCTATGGAGGCAAGCAAAATCAAAGTATCCCAAGGA
TGCATAGATCTCCTGCAGGAATTTCATCATCTGATAGATGGCAATATAGAGTTGCTTGTA
AAGCTGAGAGATTTGATTATTGACTGGGTACAAGAAGGTTTTCAAGATTTTTTCCAGAAA
CTTGATGGGCATTTTCATGTGCTCTCTGGGAGAAGCAAAAAGAAATCACAAGAGTCAACT
ATGCATTCTGTGCAAATTGATAAGGTCCCAACAGTCTTGGTACTTATGCTTGCACAACTC
TGTGTTTACATTGAACAAACAACAGTTCCTAAAGTTACAGAGGAGCTAGCTGCTTCTTTT
TTTGGAGGTGGTGCACGTAGCTACGAATATGGACCACCTTTTGTGCCTGGAGAAATATGT
CGGCTATATCGTTCATCAGGAGAGAAATTCTTGCACCATTACATAAATCTGAAGACTCAG
AAGATCTCTAAACTTCTTAATAAGCGATTTACAACACCAGTTTGGATTAAGCACAAGGAA
CCTAGGGAAGTGAACATGTTTGTTGATCTACTTCTCCTAGAGATCAATGGTGTGGTATCT
GAAGTCAAGCAGATCTTACCTGGTATAGTTCGGCGACATCGGCATTCTGATAGCACTGGT
AGCACGACTTCCTCCAGAAGCAATCCAATGCGAGAAGATATGTTGAACCGATCAAACACA
CATCGTGCTAGAAGTCAGTTTTTAGAAAACCACCTGGCAAAGTTATTCGAGCAGAAAATG
GAAATATTCACCAAAGTTGAATACACACAGGAATCTGTTATTTCTACTGTCCTCAAGCTC
TGCCTGAAAAGCTTGCAAGAATATGTCCGTCTTCAGACTTTCAACAGAAGTGGATTTCAG
CAGATTCAGCTGGATATGGAATTTCTCAAGACCTCCCTTAAGGAATTTGTGGATGATGAA
GCAGCTATCAGCTTTTTACTCAAAGAGGTGAACAATGCTGCCCACGAGAGATGTCTTGAC
CCAATCCCTCTTGAGCCCCCCATATTAGATAAGCTCATAAATGCAAAACTAGAAAAAATT
AAAGAGGAAAACCCAAATATGCGGTAG

Peptide Sequence

PEP ID

EER93494
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:7512285:7523599:-1 gene:SORBI_3001G097900 transcript:EER93494 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATADGAAPPAMDEKARRTRDLLASFYNTDPSAAAGAAAPASLARPSPTAAPASPLDSIN
SASFDPDIYMNVLVQQSNLEGLLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTIKR
MKTNIVGMETNMDQLLAKITSVQSKSDTVNTSLFDKRENIEKLHRTRNLLRKVQFIYDLP
TRLNKCIKTEAYADAVRFFTGAKPIFEAYGDTSFQDCKKASEEAMDLVIQHLQAKLYSDS
EPIEARAEAVVLLKQLNFPVDNLKSNLLEKLEDCLLNFQNEPTQASIGDISKTFRAYLII
FPDSERRLIELAQALFSNRYETVRENLKKRIPSTDLLAILRSLWEDATAIDEVIPEAALP
AFSLETTRDIIRQHIATAFLHLQSEISEALVRTRSTSNEKLEESQLQTAMEASKIKVSQG
CIDLLQEFHHLIDGNIELLVKLRDLIIDWVQEGFQDFFQKLDGHFHVLSGRSKKKSQEST
MHSVQIDKVPTVLVLMLAQLCVYIEQTTVPKVTEELAASFFGGGARSYEYGPPFVPGEIC
RLYRSSGEKFLHHYINLKTQKISKLLNKRFTTPVWIKHKEPREVNMFVDLLLLEINGVVS
EVKQILPGIVRRHRHSDSTGSTTSSRSNPMREDMLNRSNTHRARSQFLENHLAKLFEQKM
EIFTKVEYTQESVISTVLKLCLKSLQEYVRLQTFNRSGFQQIQLDMEFLKTSLKEFVDDE
AAISFLLKEVNNAAHERCLDPIPLEPPILDKLINAKLEKIKEENPNMR

Transcript Sequence

Transcript ID

EER93494
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:7512285:7523599:-1 gene:SORBI_3001G097900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGAGCTTACCTGGAGTTGCAAAAACAAACAAACACACAGTAAAAAGTGAATGATCTCGTT
TGCATATCTTTAGCCCTGTATAATTTCGAAAATTACAGAGCTATGCGAAATTACGCTTGG
AAACGAAACTTTCCAAAACACCCCTGATCATTCTCCATCTCCACTCCCACAACCTCTCTC
TGGTCTCTCCGGCGTCCCGACTGCGAGCCCCGCCGCGAAGCCCCACCGATATGGCGACAG
CCGATGGCGCCGCACCGCCGGCAATGGACGAGAAGGCGCGGCGCACGCGTGACCTCCTTG
CTAGCTTCTACAACACCGACCCGTCGGCGGCCGCCGGGGCCGCGGCCCCCGCGTCCCTGG
CGCGGCCGTCCCCTACAGCCGCGCCCGCATCGCCCCTCGACTCCATCAACTCCGCCTCCT
TCGATCCCGACATCTACATGAATGTTCTGGTGCAGCAATCCAATCTGGAAGGCCTTCTAC
AAAGGCATGTGAAGATGGCTGCTGAGATCAAGAACCTAGACACAGATTTACAGATGCTAG
TGTATGAGAATTATAACAAGTTTATTAGTGCAACTGACACTATAAAAAGGATGAAGACTA
ACATTGTTGGGATGGAGACAAATATGGACCAGCTCCTTGCAAAGATAACATCAGTGCAAT
CAAAAAGCGACACAGTAAATACATCTCTTTTTGACAAAAGGGAAAACATCGAGAAATTAC
ATCGTACACGCAATCTGCTCCGGAAAGTTCAATTCATATATGACCTTCCAACTCGGCTTA
ACAAATGCATCAAGACCGAAGCATATGCAGATGCTGTCAGGTTTTTTACTGGAGCAAAAC
CTATTTTTGAGGCCTATGGAGATACGTCTTTTCAAGACTGTAAAAAGGCATCCGAGGAGG
CAATGGATTTAGTTATACAACACCTTCAGGCAAAGTTATACTCAGATTCTGAACCTATTG
AAGCAAGAGCAGAAGCTGTAGTTCTCCTTAAACAATTGAACTTTCCGGTGGACAACTTAA
AATCGAATCTACTTGAGAAGCTTGAAGATTGCCTCTTGAATTTCCAGAATGAGCCTACGC
AGGCTTCAATTGGTGACATCTCAAAGACATTCCGTGCTTATTTAATAATATTTCCTGATT
CGGAAAGGCGTCTCATTGAACTTGCACAAGCTTTGTTCTCAAACCGATATGAAACAGTCA
GAGAGAATCTGAAGAAAAGAATTCCATCAACAGATCTGCTGGCAATACTACGATCCTTAT
GGGAGGATGCAACCGCCATCGATGAAGTTATTCCAGAGGCTGCGCTACCAGCTTTTTCTT
TGGAGACTACTCGAGACATTATTAGGCAACACATAGCAACTGCATTTCTCCATCTTCAAA
GTGAAATATCAGAGGCACTGGTTAGGACACGTTCAACATCAAATGAGAAGTTAGAAGAGT
CACAGCTGCAAACTGCTATGGAGGCAAGCAAAATCAAAGTATCCCAAGGATGCATAGATC
TCCTGCAGGAATTTCATCATCTGATAGATGGCAATATAGAGTTGCTTGTAAAGCTGAGAG
ATTTGATTATTGACTGGGTACAAGAAGGTTTTCAAGATTTTTTCCAGAAACTTGATGGGC
ATTTTCATGTGCTCTCTGGGAGAAGCAAAAAGAAATCACAAGAGTCAACTATGCATTCTG
TGCAAATTGATAAGGTCCCAACAGTCTTGGTACTTATGCTTGCACAACTCTGTGTTTACA
TTGAACAAACAACAGTTCCTAAAGTTACAGAGGAGCTAGCTGCTTCTTTTTTTGGAGGTG
GTGCACGTAGCTACGAATATGGACCACCTTTTGTGCCTGGAGAAATATGTCGGCTATATC
GTTCATCAGGAGAGAAATTCTTGCACCATTACATAAATCTGAAGACTCAGAAGATCTCTA
AACTTCTTAATAAGCGATTTACAACACCAGTTTGGATTAAGCACAAGGAACCTAGGGAAG
TGAACATGTTTGTTGATCTACTTCTCCTAGAGATCAATGGTGTGGTATCTGAAGTCAAGC
AGATCTTACCTGGTATAGTTCGGCGACATCGGCATTCTGATAGCACTGGTAGCACGACTT
CCTCCAGAAGCAATCCAATGCGAGAAGATATGTTGAACCGATCAAACACACATCGTGCTA
GAAGTCAGTTTTTAGAAAACCACCTGGCAAAGTTATTCGAGCAGAAAATGGAAATATTCA
CCAAAGTTGAATACACACAGGAATCTGTTATTTCTACTGTCCTCAAGCTCTGCCTGAAAA
GCTTGCAAGAATATGTCCGTCTTCAGACTTTCAACAGAAGTGGATTTCAGCAGATTCAGC
TGGATATGGAATTTCTCAAGACCTCCCTTAAGGAATTTGTGGATGATGAAGCAGCTATCA
GCTTTTTACTCAAAGAGGTGAACAATGCTGCCCACGAGAGATGTCTTGACCCAATCCCTC
TTGAGCCCCCCATATTAGATAAGCTCATAAATGCAAAACTAGAAAAAATTAAAGAGGAAA
ACCCAAATATGCGGTAGCTATGCACAGATTGGTATGGTTTACTAGAATTCAGTTCTGTCC
ATTTGAATGCAATTCATATGTTTGCAACTTCATAGGTCTAGGCCACATAGCATGTTGTTT
TCCGCATGTAAATCTGGAGACTGGAGTCAGACTCAGAATTGAATAACACTCCCCAAATGT
ATGCTAGTATACTTAATTTGAGGCGGCTGAGCTCAGCTTGGCATCCACTTGCAGCCTTGC
TTGTCAAGCGGCCATCAAGTTGTCTTCTGTGCATTGTTGTTTAATCCCGGGTCAGGAGAG
CTCTTGTCTGAATTTAATCAGATGGGTGTTGTGAAGTTTTTGAATGAAAGATAGGTAAAT
ACAGTTTTCTGAGGACACTGCACATATATAAACTAAGTAAGCATTCTTTAACTGTACTTC
TCATGATGAACTTATAGTAAATGATATTGGTACTTCAAGAATGTCTTACTGTACTTTCAC
ATTATTGGCAGACTGGCTACTATGATCAAGCACCTAAGGGCACTAACTCTAATAGATTCA
CCATTTGGAAACCGAGGACAGTTATCATGATGGTGAAGATGGTTTGTTGGGAGTGCGACT
TCCCTTTATGCACCCTGATTTTTTTTTTTATTTCTCACCTTTTGTTGTATCATCCTTTCT
TTCAATTATAGTTTCCTGTGGTACATGTCACTTTTTTTACCTTCGCCACAATACTGCTCA
CGAATAGCATTTTGTGCCATATTACCATGCCTTGAAATAAAATTTTTATCCCC