Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93436
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:6708365:6712052:-1 gene:SORBI_3001G086600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGTGGGGGCGGTTCAGATTCACCCCTCACAGCGGGCTCAGCCGGACGCGGTGGACG
CGGGTCTTCCCCGCGCAGAAGTCCGCGCCTTGCACCGTGGTGCTTAGCGATGAGGACGAT
GATGGTGACGATACCTCCGACTCGGATGTTCTCATAATCGACGACGCAGCTGCGGGAGAA
TCAGCTTCTGCGGCGGGACGTGGATCTCAAGCCAGGAAAGGGAACCACTCCTCCAGTAAC
GTGATCAACATAGATGATGATGAAGACGAGGAAGATGGTACCAGAGGGGATAAAGCAGGT
CCCAGCATGTCCCGTGCTTCTGGGTCTCCAGCAGCTATGACACCGGGTCGGGGTTCTCCA
CGGAACAGATATGGGATTGGGATGAATGGGATGGATTCCATGTCCGACAGCTCTGAGAGC
GATCTTACTGAAGGATGGGACTCTTACACTGATGATGGCAGCTCTGATTGTGAGATTCTC
GATGACACTTACACTGATGATGGCAGCTCTGATTGTGAGATTCTCGATGACACTGGTACA
GCACGTAAGATGTGGGAGACAGCTGCTTCCAGAAAAAAGCCAGCTAACGGTGTCCATGAG
TGTAAGGATGCTGGGACTACTGCATTTGAATCACGTGCTGGGTTGGAGACACAACCAGGT
AAAAACTCTGAGCATCTCTTTGGTGCCGAATGCCATCCAGACGAGAGTATGTCTCGGTTT
TGCAGCGCTGCAAGCAAGTATGACTCTCAAAATAGTAGTAGCGGAACAAAGGAATGCCCT
GGGCGTGCTCAAAGTAGTGCTGGCAATGCAAATGGTTCCAATGGCCCTTCTGTGCCAAAT
GCCGAAGATGTGCCAAATGATACCAGCAGGTCAAAGGATGGCCATGACCAATCTTCAGTG
CCAAATGTCGAGAAATGTTCAATGGTTGGTTCTGAAAAAGCTTCAGAAGGTGTTCAATCG
CCTCGGCTGGATGAAAACTCTGCGTGTAACTTTGCCTCTGCAAATAGGTTTTTTTCTGGG
ATCTCATCAACGAGCAGGAAAGATGGAAGTCCTCCAATTTCTGTCAGCACTCCTGAAAAG
GTTGATGAGAAAATACCTGATCAGTCGCCACCTGAAGCTTCCTTTAACACAAATATTTAT
TCTGCTCAAGATAATGGTCCTGTCAGGGGTAAGGATTTGCTTCAAGATCCCGAGGACTTG
GGGCTATTTGCTTCATTGATTGGTGAACGTGAAAAACACAAAGAATCTGTTGAGTACAAG
CGGGCAGCAGAGGAGGAGTGGGCATCGAGACAGCGGCAATTACAAATACAGGCTGAGGAA
GCAAAGAAATTGCGAAAGAGAAAGAAAGCTGAAGCTCAACGATTGCTTGACATGGAGAAG
AGACAAAAGCAAAGACTGCAAGAAGTCCGTGAATCACAGAGAAAGAATGAAGAAGCTATA
CAGCTTAAGGAGCAGTATCGGGGTGTAGTCAGAAAGGAACTGGAAGATTTGGAAAGGAGA
CATTGGGATATGACTTCAATATTGCATGCGCTAGGCATCTCTGTTGAAGGTGGTGAGGTT
AAAGCCTTCAAGCAAGCTCTTCTGAAATTCCATCCCGACAGGGTATCAAGAAATGATATT
TATCAACAAGTAAAAGCAGAGGAGACATTTAAGTTCATTTCGCGGCTGAAGGAGAAGCTA
CCTCGGCTATCCTAA

Peptide Sequence

PEP ID

EER93436
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:6708365:6712052:-1 gene:SORBI_3001G086600 transcript:EER93436 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSWGRFRFTPHSGLSRTRWTRVFPAQKSAPCTVVLSDEDDDGDDTSDSDVLIIDDAAAGE
SASAAGRGSQARKGNHSSSNVINIDDDEDEEDGTRGDKAGPSMSRASGSPAAMTPGRGSP
RNRYGIGMNGMDSMSDSSESDLTEGWDSYTDDGSSDCEILDDTYTDDGSSDCEILDDTGT
ARKMWETAASRKKPANGVHECKDAGTTAFESRAGLETQPGKNSEHLFGAECHPDESMSRF
CSAASKYDSQNSSSGTKECPGRAQSSAGNANGSNGPSVPNAEDVPNDTSRSKDGHDQSSV
PNVEKCSMVGSEKASEGVQSPRLDENSACNFASANRFFSGISSTSRKDGSPPISVSTPEK
VDEKIPDQSPPEASFNTNIYSAQDNGPVRGKDLLQDPEDLGLFASLIGEREKHKESVEYK
RAAEEEWASRQRQLQIQAEEAKKLRKRKKAEAQRLLDMEKRQKQRLQEVRESQRKNEEAI
QLKEQYRGVVRKELEDLERRHWDMTSILHALGISVEGGEVKAFKQALLKFHPDRVSRNDI
YQQVKAEETFKFISRLKEKLPRLS

Transcript Sequence

Transcript ID

EER93436
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:6708365:6712052:-1 gene:SORBI_3001G086600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTTTCTCCCCGCTGGTGCTCTCGCAAGTACTCCTGGAAACGGCTCTCCCTCTCCCGAAGT
CCAAATCCCAAATCCCAAATAAAAAAAAAGGGAGGTGGATTTTCCATCCCGCGGCCGGTG
CACGATCGATCCCCTTCCTTTTGCTCTGCACCGCCTCCTCGGCTTGGTCGCGTCGCCTCG
CGTCCACTCCCCACCAACTCCGAACTCCTTCCCCCTCTTTCCCAAATCGAGCAGGCGGCG
GGGAGCCCGGCGGCTCGGTTTCTTGGGTCCCAGATTCAATCCCTCTCCGAATCTCGCCGC
CGGCGTCGCTACCACGGTAAGTCCCCTCTTTTTCAACGCCGTCCCACGCCCATTCCTGCG
AATTAGGGTTACTGATTGCGCATTTCCGCCGTCGCGTTCGATTGAATCTACAAGCTTGCC
GTTTCTCCTGCAGGATCGCCGTGGAACACCGAGGTTGTCGCGGGTTTCGGCATGCTATAG
TCGCCAGCCTGCAGCGGCGATCGTCTCCGAGCCGGGCTAGCCATGTCGTGGGGGCGGTTC
AGATTCACCCCTCACAGCGGGCTCAGCCGGACGCGGTGGACGCGGGTCTTCCCCGCGCAG
AAGTCCGCGCCTTGCACCGTGGTGCTTAGCGATGAGGACGATGATGGTGACGATACCTCC
GACTCGGATGTTCTCATAATCGACGACGCAGCTGCGGGAGAATCAGCTTCTGCGGCGGGA
CGTGGATCTCAAGCCAGGAAAGGGAACCACTCCTCCAGTAACGTGATCAACATAGATGAT
GATGAAGACGAGGAAGATGGTACCAGAGGGGATAAAGCAGGTCCCAGCATGTCCCGTGCT
TCTGGGTCTCCAGCAGCTATGACACCGGGTCGGGGTTCTCCACGGAACAGATATGGGATT
GGGATGAATGGGATGGATTCCATGTCCGACAGCTCTGAGAGCGATCTTACTGAAGGATGG
GACTCTTACACTGATGATGGCAGCTCTGATTGTGAGATTCTCGATGACACTTACACTGAT
GATGGCAGCTCTGATTGTGAGATTCTCGATGACACTGGTACAGCACGTAAGATGTGGGAG
ACAGCTGCTTCCAGAAAAAAGCCAGCTAACGGTGTCCATGAGTGTAAGGATGCTGGGACT
ACTGCATTTGAATCACGTGCTGGGTTGGAGACACAACCAGGTAAAAACTCTGAGCATCTC
TTTGGTGCCGAATGCCATCCAGACGAGAGTATGTCTCGGTTTTGCAGCGCTGCAAGCAAG
TATGACTCTCAAAATAGTAGTAGCGGAACAAAGGAATGCCCTGGGCGTGCTCAAAGTAGT
GCTGGCAATGCAAATGGTTCCAATGGCCCTTCTGTGCCAAATGCCGAAGATGTGCCAAAT
GATACCAGCAGGTCAAAGGATGGCCATGACCAATCTTCAGTGCCAAATGTCGAGAAATGT
TCAATGGTTGGTTCTGAAAAAGCTTCAGAAGGTGTTCAATCGCCTCGGCTGGATGAAAAC
TCTGCGTGTAACTTTGCCTCTGCAAATAGGTTTTTTTCTGGGATCTCATCAACGAGCAGG
AAAGATGGAAGTCCTCCAATTTCTGTCAGCACTCCTGAAAAGGTTGATGAGAAAATACCT
GATCAGTCGCCACCTGAAGCTTCCTTTAACACAAATATTTATTCTGCTCAAGATAATGGT
CCTGTCAGGGGTAAGGATTTGCTTCAAGATCCCGAGGACTTGGGGCTATTTGCTTCATTG
ATTGGTGAACGTGAAAAACACAAAGAATCTGTTGAGTACAAGCGGGCAGCAGAGGAGGAG
TGGGCATCGAGACAGCGGCAATTACAAATACAGGCTGAGGAAGCAAAGAAATTGCGAAAG
AGAAAGAAAGCTGAAGCTCAACGATTGCTTGACATGGAGAAGAGACAAAAGCAAAGACTG
CAAGAAGTCCGTGAATCACAGAGAAAGAATGAAGAAGCTATACAGCTTAAGGAGCAGTAT
CGGGGTGTAGTCAGAAAGGAACTGGAAGATTTGGAAAGGAGACATTGGGATATGACTTCA
ATATTGCATGCGCTAGGCATCTCTGTTGAAGGTGGTGAGGTTAAAGCCTTCAAGCAAGCT
CTTCTGAAATTCCATCCCGACAGGGTATCAAGAAATGATATTTATCAACAAGTAAAAGCA
GAGGAGACATTTAAGTTCATTTCGCGGCTGAAGGAGAAGCTACCTCGGCTATCCTAATAG
CCATCCCCAACTCAGTCTCTGTTTTTACACATGCCTTAGTCGCATCCTCCTTTTAACCTG
TAGGGTCAAGGTACAGAGTTGAGAGGATGTTTATTGGCGTTCTTAGAAGTAACTAGGGCT
TAGCTCTTTCGCTTGGGTTCGGTTTGGTAGGCATTCGTGTACCTGGATGGCGAAACGGTT
GTACATGACCGATGGCAGAAAGAACATTCTTTTTTAAGGCCATCTTTATTAATTTATCCT
ACAAAA