Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93355
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:5304060:5308636:-1 gene:SORBI_3001G069900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGAGCCGGGCCGACCTCGCCGACGACGGCTTCGCGGCGCCGCGGCTCTTCTCG
CAGGGCGTCTCCTACACCTACGACGACGTCATCTTCCTGCCGGGGTACATCGGCTTCCCC
GCCGACGCCGTCGACCTCTCCACGCGCCTCTCCCGCCGCGTGCCGCTCTCCATCCCCTGC
GTCGCGTCCCCGATGGACACCGTCTCCGAGGCCACCATGGCCGCGGCCATGGCCTCCCTC
GGCGCCGCCGCCGTCGTGCACTGCAACACCGAACCCCACGCCCAGGCCGCCATCGTCCGC
GCCGCCAAGTCACGCCGCCTCCCCTTCGTCTCCTCCGTGCCCTTCTTCTCCCCGTCCTCC
GCCCCGACGCTCAACGACTTCGCTGGCAACGAGTACGCCCTCGTTACTCAGCACGGAGAT
TCGCTCTCCACGCTCGTCGGCGTCGCTGTCGCAGCCGATGCTGCCTCCCGCGAGGTCCCT
GTCTCTGTCTATGAGTACATGAGACCGGCACCGCGCTTAGCCTCCGCCTCCTTCGACTTC
GAGAAAGCGGCCGCCTTCCTTGCCGATGAGGGTCTGGATTACGCCCCTCTTGTATCCGAC
GACGGTGAGGTTGTCGATCTCATCACCGCCAAGGATGTGGAGCGCATCCGGAGCTATCCG
AAGCTAGGCAAGCCGTCTCTTGGAGCAGACGGGAAGTTTGTAGTTGCGGCCTCCATTGGG
ACCCGTGAGGATGACAAGGGAAGGCTGGAGCAGCTAGTTAAGGCGGGGGCAAATGCTATC
GTGATTGATAGTTCACAGGGGAACTCCATTTACCAGCTTGATATGATAAAGTTTGCCAAG
AAGATGTACCCGGAGGTGGATTTGATTGGGGGTAATGTGGTGACAATTGCACAGGCCCAG
AATTTGATTCAAGCTGGTGCAGATGGTTTGCGTGTTGGAATGGGTTCTGGCTCAATTTGT
ACCACTCAGGAGGTTTGTGCTGTTGGAAGAGGACAGGCAACAGCGGTGTATAAGGTTTCA
TCTTATGCCAAGGATCACAATGTACCAGTTATTGCTGATGGTGGAATTTCAAACTCTGGA
CATATCGTGAAAGCTCTGTCACTGGGGGCATCCACTGTTATGATGGGCAGCTTTTTAGCC
GGCAGTCACGAAGCTCCTGGTACTTATGAGTACAAGGACGGGCGTCGAGTCAAAAAATAC
AGAGGCATGGGCTCTCTTGAAGCCATGACAAAAGGGAGTGATGCAAGGTACCTTGGTGAT
ACTCTCAAGCTCAAAGTCGCCCAAGGCGTTGTTGGAGCAGTAGCTGACAAAGGTTCTGTA
CTGAGGTTCATTCCTTACACAATGCAAGCAGTTAAGCAAGGATTCCAAGATCTTGGTGCA
GATTCTCTCCAGTCAGCTCATGATCTTTTGCGATCAGAGACTCTCAGATTAGAGGTGAGA
ACCGGCGCTGCCCAGGTTGAAGGTGGAATCCATGGGCTGGTTTCATACGAGAAGAAGGCA
TTCTAG

Peptide Sequence

PEP ID

EER93355
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:5304060:5308636:-1 gene:SORBI_3001G069900 transcript:EER93355 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAASRADLADDGFAAPRLFSQGVSYTYDDVIFLPGYIGFPADAVDLSTRLSRRVPLSIPC
VASPMDTVSEATMAAAMASLGAAAVVHCNTEPHAQAAIVRAAKSRRLPFVSSVPFFSPSS
APTLNDFAGNEYALVTQHGDSLSTLVGVAVAADAASREVPVSVYEYMRPAPRLASASFDF
EKAAAFLADEGLDYAPLVSDDGEVVDLITAKDVERIRSYPKLGKPSLGADGKFVVAASIG
TREDDKGRLEQLVKAGANAIVIDSSQGNSIYQLDMIKFAKKMYPEVDLIGGNVVTIAQAQ
NLIQAGADGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSYAKDHNVPVIADGGISNSG
HIVKALSLGASTVMMGSFLAGSHEAPGTYEYKDGRRVKKYRGMGSLEAMTKGSDARYLGD
TLKLKVAQGVVGAVADKGSVLRFIPYTMQAVKQGFQDLGADSLQSAHDLLRSETLRLEVR
TGAAQVEGGIHGLVSYEKKAF

Transcript Sequence

Transcript ID

EER93355
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:5304060:5308636:-1 gene:SORBI_3001G069900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCTCTCTTCAGTCTTCACACGCCTCCCTTCATTCCCGCCGCCACCTCCGCCGCCGCCGCA
GCCAAAAACCCTAAACCCCCACCTAATCAACCAATGGCGGCGAGCCGGGCCGACCTCGCC
GACGACGGCTTCGCGGCGCCGCGGCTCTTCTCGCAGGGCGTCTCCTACACCTACGACGAC
GTCATCTTCCTGCCGGGGTACATCGGCTTCCCCGCCGACGCCGTCGACCTCTCCACGCGC
CTCTCCCGCCGCGTGCCGCTCTCCATCCCCTGCGTCGCGTCCCCGATGGACACCGTCTCC
GAGGCCACCATGGCCGCGGCCATGGCCTCCCTCGGCGCCGCCGCCGTCGTGCACTGCAAC
ACCGAACCCCACGCCCAGGCCGCCATCGTCCGCGCCGCCAAGTCACGCCGCCTCCCCTTC
GTCTCCTCCGTGCCCTTCTTCTCCCCGTCCTCCGCCCCGACGCTCAACGACTTCGCTGGC
AACGAGTACGCCCTCGTTACTCAGCACGGAGATTCGCTCTCCACGCTCGTCGGCGTCGCT
GTCGCAGCCGATGCTGCCTCCCGCGAGGTCCCTGTCTCTGTCTATGAGTACATGAGACCG
GCACCGCGCTTAGCCTCCGCCTCCTTCGACTTCGAGAAAGCGGCCGCCTTCCTTGCCGAT
GAGGGTCTGGATTACGCCCCTCTTGTATCCGACGACGGTGAGGTTGTCGATCTCATCACC
GCCAAGGATGTGGAGCGCATCCGGAGCTATCCGAAGCTAGGCAAGCCGTCTCTTGGAGCA
GACGGGAAGTTTGTAGTTGCGGCCTCCATTGGGACCCGTGAGGATGACAAGGGAAGGCTG
GAGCAGCTAGTTAAGGCGGGGGCAAATGCTATCGTGATTGATAGTTCACAGGGGAACTCC
ATTTACCAGCTTGATATGATAAAGTTTGCCAAGAAGATGTACCCGGAGGTGGATTTGATT
GGGGGTAATGTGGTGACAATTGCACAGGCCCAGAATTTGATTCAAGCTGGTGCAGATGGT
TTGCGTGTTGGAATGGGTTCTGGCTCAATTTGTACCACTCAGGAGGTTTGTGCTGTTGGA
AGAGGACAGGCAACAGCGGTGTATAAGGTTTCATCTTATGCCAAGGATCACAATGTACCA
GTTATTGCTGATGGTGGAATTTCAAACTCTGGACATATCGTGAAAGCTCTGTCACTGGGG
GCATCCACTGTTATGATGGGCAGCTTTTTAGCCGGCAGTCACGAAGCTCCTGGTACTTAT
GAGTACAAGGACGGGCGTCGAGTCAAAAAATACAGAGGCATGGGCTCTCTTGAAGCCATG
ACAAAAGGGAGTGATGCAAGGTACCTTGGTGATACTCTCAAGCTCAAAGTCGCCCAAGGC
GTTGTTGGAGCAGTAGCTGACAAAGGTTCTGTACTGAGGTTCATTCCTTACACAATGCAA
GCAGTTAAGCAAGGATTCCAAGATCTTGGTGCAGATTCTCTCCAGTCAGCTCATGATCTT
TTGCGATCAGAGACTCTCAGATTAGAGGTGAGAACCGGCGCTGCCCAGGTTGAAGGTGGA
ATCCATGGGCTGGTTTCATACGAGAAGAAGGCATTCTAGTTCCATAACCAAACAAGGAAG
AATTGGAACAAGAGTGGTTAGCTGCATGATATGGAAGGGACGATGCTCATCATCCTTCCT
GGCAAAAGCTCAGCAGCTTGTCAGCAAAGCTTGTCGATTTGGGCAGCAGGTGTACCATCT
ATTGTAGCGTAATATAATAATAAACCTCCGGCTTTGGAATTGCCGGATAAGCTCACGGCT
TGTCATCAAAACTTTGTCCCCAGTTTTGCTCAGAGTAATACTGCTATTTAAATATTTAAC
AATGATTTGGATCTGGTGATCGATGTACTCTGTCCTGCCATGTTGGGTTGTACACTTGTA
GTCCCCGTGTTTGAAGAATGCTGTCATGGCTAGTATGCCACTTTACCAGACTGCTTCAAC
AAATTTGAGCAGCCAAATTATGAGTTGTGCTTGCAACTG