Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93338
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:4926191:4934235:-1 gene:SORBI_3001G065100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCTCAGCCCCACGCCGCCGCTGCCGCCTCGAAGCGCCCCTTCTCGTCCACCACCACA
TCCCCGTCCCCGACCTCCTCCCCTGCGACGCCGCTTATGAAGAAGGCCAAGCACCCCGCC
GCCTCCTCCTCCTCCGCGGGGACCGTCGAGAAGAACGGCATCCAACTTGATACCGCCGTC
GCCGCCGCCGCCGCCACGGGCGGGGGCCGAACGAACGGCGAGGAGGATGCGGAGATGGTG
CTCGCGGACCAGGACGAGCTCCCCGCGCCCAGCGCGCCGGCCTCCGCGGGCGTTGCCGCC
AACCTCTTCCGTAAGAAGGCCACGCTCCCGCAGCCGTCGACCTCCGCCCGCAAGCCCCTC
CGCATCAAAATAGGTCAACCAAAACTGCCAAAAAACTTCGAAGAGGATACATGGGCAATT
TTGAAGGATGCTATCACAGCTATTTTTCTCAAGCAGAAACTTTCTTGTGATGTTGAGAAA
CTCTATCAGGCTGCTGGTGATCTTTGTCTACACAAGCTAGGGGCAAACCTATACGAACGA
ATCAAGAAAGAATGTGAAATACACATAGCTGAAAAAATATCAGCATTAGTGGGTCAAAGC
CCAGATTTGGTTGTATTTTTGTCTCTGGTCCAAAGAACATGGCAAGATTTTTGTGATCAG
ATGTTGATTATTCGTGGTATTGCTTTACTTCTTGATGTAAAATATGTCAAGAATGTGGCA
AATATTTGTTCAGTGTGGGATATGGGGCTGCAACTGTTCCGCAAGCATCTATCACTATCC
CCGGAGATTGAACACAAAACTGTAACTGGCCTTCTCAGATTGATTGAGAGTGAGAGGCTT
GGTGAAGCAATAGATAGGACATTACTTAGTCATCTTCTGAAGATGCTCACTGCTCTTGGA
ATGTATTCAGAGAGTTTTGAAAAGCCCTTTCTTGAATGCACTTCTGAATTTTATGCTACG
GAAGGTGTTAAATATATGCAACAATCTGATATTCCAGACTACCTGAAGCATGTGGAGTCG
AGGTTGCAAGAAGAACATGAAAGGTGTATTCTATATTTGGAAGCTAACACAAGGAAGCCA
CTAATCGCAACTACTGAAAAGCAATTGCTAGAACGTCATACATCTGCAATTATTGAGAAG
GGGTTCTCTATGCTCATGGATGCAAATCGTATAAATGACCTCTCGAGGATGTACGACCTT
TTCCAGAGGGTTAACGCTGTTGAGTTGCTAAAACTAGCGCTTAGTTCATATATCCGGGCT
ACAGGCCAGGGCATTATTATGGATGAAGAAAAGGACAGAGAATTAGTTCCATTTCTTCTT
GATTTTAAGGCATCCCTTGACAAAATATTGGAAGAAAGTTTTGCCAAGAATGAGGCTTTC
TCGAATACCATAAAAGATTCATTTGAGCACCTTATCAATCTAAGACAGAACCGACCTGCG
GAATTGATTGCAAAGTTTCTTGATGAGAAACTTCGAGCTGGCAATAAAGGGACATCAGAA
GAAGAGCTGGAGGGTATACTTGATAGAGTTTTGGTCCTGTTTCGGTTTATACAAGGTAAA
GATGTATTTGAGGCATTCTACAAGAAGGATCTAGCTAAGAGGTTGCTGCTTGGGAAGAGC
GCATCAATAGATGCTGAAAAATCGATGATCACAAAACTCAAAACTGAGTGTGGAAGTCAG
TTTACCAACAAGCTGGAGGGAATGTTCAAGGACATTGAATTATCCAAAGAAATAAATGAT
TCATTCAGGCAATCATCTCAAGCTAGGACAAAGCTTCCCTCTGGCATTGAAATGAGTGTT
CATGTGCTTACAACAGGCTATTGGCCTACATATCCACCAATGGACGTGAAACTCCCACAC
GAACTGAATGTGTACCAGGATATATTTAAAGAGTTCTATTTGAGCAAGTACAGTGGAAGG
CGTTTAATGTGGCAGAATTCTTTGGGACATTGTGTCTTGAAAGCGGACTTTCCCAAAGGC
AAAAAGGAACTTGCAGTGTCATTGTTTCAGAGTGTGGTTTTGATGTTGTTCAATGATGCA
CAAAAGTTAAGTTTCCTTGACATCAAAGATTCCACTGGTATCGAGGATAAAGAATTGAGA
CGGACACTGCAATCACTTGCATGTGGTAAAGTTCGGGTTCTCCAAAAGATACCAAAAGGG
AGAGATGTAGAAGATAAGGATGAATTTGTATTCAATGAAGATTTTAGTGCTCCCCTCTAT
CGCATAAAGGTAAATGCAATTCAAATGAAGGAGACGGTAGAAGAAAACACGAGCACCACT
GAGAGAGTGTTCCAGGATCGGCAGTATCAGGTTGATGCAGCCATAGTTCGAATAATGAAG
ACGCGGAAGGTCCTCAGCCACACCCTTCTAATAACGGAGCTTTACCAGCAGCTCAAGTTC
CCTGTTAAGCCAGCTGATATCAAGAAAAGAATAGAGAGCTTGATCGACCGGGAGTACCTG
GAACGGGACAGGAGTAACCCCCAGATCTACAACTATCTGGCTTGA

Peptide Sequence

PEP ID

EER93338
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:4926191:4934235:-1 gene:SORBI_3001G065100 transcript:EER93338 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSQPHAAAAASKRPFSSTTTSPSPTSSPATPLMKKAKHPAASSSSAGTVEKNGIQLDTAV
AAAAATGGGRTNGEEDAEMVLADQDELPAPSAPASAGVAANLFRKKATLPQPSTSARKPL
RIKIGQPKLPKNFEEDTWAILKDAITAIFLKQKLSCDVEKLYQAAGDLCLHKLGANLYER
IKKECEIHIAEKISALVGQSPDLVVFLSLVQRTWQDFCDQMLIIRGIALLLDVKYVKNVA
NICSVWDMGLQLFRKHLSLSPEIEHKTVTGLLRLIESERLGEAIDRTLLSHLLKMLTALG
MYSESFEKPFLECTSEFYATEGVKYMQQSDIPDYLKHVESRLQEEHERCILYLEANTRKP
LIATTEKQLLERHTSAIIEKGFSMLMDANRINDLSRMYDLFQRVNAVELLKLALSSYIRA
TGQGIIMDEEKDRELVPFLLDFKASLDKILEESFAKNEAFSNTIKDSFEHLINLRQNRPA
ELIAKFLDEKLRAGNKGTSEEELEGILDRVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKS
ASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINDSFRQSSQARTKLPSGIEMSV
HVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKG
KKELAVSLFQSVVLMLFNDAQKLSFLDIKDSTGIEDKELRRTLQSLACGKVRVLQKIPKG
RDVEDKDEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMK
TRKVLSHTLLITELYQQLKFPVKPADIKKRIESLIDREYLERDRSNPQIYNYLA

Transcript Sequence

Transcript ID

EER93338
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:4926191:4934235:-1 gene:SORBI_3001G065100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAAAAGAAAAGAAAAAGGGAGGCGAAACCCTTCTCCCCCGCCCCAACCCGATCTCTCTC
GCTCCCTCCGGTTCTCTCTCCGCCACCTCACCGCCGGCTCGCTCCCAAAATCCTCGCGCC
GGACGCCGCCCCCCGCCTCCGCCTCCGCCGCGCCATGCCCGTCGGCGCCTGATTCATGTC
TCAGCCCCACGCCGCCGCTGCCGCCTCGAAGCGCCCCTTCTCGTCCACCACCACATCCCC
GTCCCCGACCTCCTCCCCTGCGACGCCGCTTATGAAGAAGGCCAAGCACCCCGCCGCCTC
CTCCTCCTCCGCGGGGACCGTCGAGAAGAACGGCATCCAACTTGATACCGCCGTCGCCGC
CGCCGCCGCCACGGGCGGGGGCCGAACGAACGGCGAGGAGGATGCGGAGATGGTGCTCGC
GGACCAGGACGAGCTCCCCGCGCCCAGCGCGCCGGCCTCCGCGGGCGTTGCCGCCAACCT
CTTCCGTAAGAAGGCCACGCTCCCGCAGCCGTCGACCTCCGCCCGCAAGCCCCTCCGCAT
CAAAATAGGTCAACCAAAACTGCCAAAAAACTTCGAAGAGGATACATGGGCAATTTTGAA
GGATGCTATCACAGCTATTTTTCTCAAGCAGAAACTTTCTTGTGATGTTGAGAAACTCTA
TCAGGCTGCTGGTGATCTTTGTCTACACAAGCTAGGGGCAAACCTATACGAACGAATCAA
GAAAGAATGTGAAATACACATAGCTGAAAAAATATCAGCATTAGTGGGTCAAAGCCCAGA
TTTGGTTGTATTTTTGTCTCTGGTCCAAAGAACATGGCAAGATTTTTGTGATCAGATGTT
GATTATTCGTGGTATTGCTTTACTTCTTGATGTAAAATATGTCAAGAATGTGGCAAATAT
TTGTTCAGTGTGGGATATGGGGCTGCAACTGTTCCGCAAGCATCTATCACTATCCCCGGA
GATTGAACACAAAACTGTAACTGGCCTTCTCAGATTGATTGAGAGTGAGAGGCTTGGTGA
AGCAATAGATAGGACATTACTTAGTCATCTTCTGAAGATGCTCACTGCTCTTGGAATGTA
TTCAGAGAGTTTTGAAAAGCCCTTTCTTGAATGCACTTCTGAATTTTATGCTACGGAAGG
TGTTAAATATATGCAACAATCTGATATTCCAGACTACCTGAAGCATGTGGAGTCGAGGTT
GCAAGAAGAACATGAAAGGTGTATTCTATATTTGGAAGCTAACACAAGGAAGCCACTAAT
CGCAACTACTGAAAAGCAATTGCTAGAACGTCATACATCTGCAATTATTGAGAAGGGGTT
CTCTATGCTCATGGATGCAAATCGTATAAATGACCTCTCGAGGATGTACGACCTTTTCCA
GAGGGTTAACGCTGTTGAGTTGCTAAAACTAGCGCTTAGTTCATATATCCGGGCTACAGG
CCAGGGCATTATTATGGATGAAGAAAAGGACAGAGAATTAGTTCCATTTCTTCTTGATTT
TAAGGCATCCCTTGACAAAATATTGGAAGAAAGTTTTGCCAAGAATGAGGCTTTCTCGAA
TACCATAAAAGATTCATTTGAGCACCTTATCAATCTAAGACAGAACCGACCTGCGGAATT
GATTGCAAAGTTTCTTGATGAGAAACTTCGAGCTGGCAATAAAGGGACATCAGAAGAAGA
GCTGGAGGGTATACTTGATAGAGTTTTGGTCCTGTTTCGGTTTATACAAGGTAAAGATGT
ATTTGAGGCATTCTACAAGAAGGATCTAGCTAAGAGGTTGCTGCTTGGGAAGAGCGCATC
AATAGATGCTGAAAAATCGATGATCACAAAACTCAAAACTGAGTGTGGAAGTCAGTTTAC
CAACAAGCTGGAGGGAATGTTCAAGGACATTGAATTATCCAAAGAAATAAATGATTCATT
CAGGCAATCATCTCAAGCTAGGACAAAGCTTCCCTCTGGCATTGAAATGAGTGTTCATGT
GCTTACAACAGGCTATTGGCCTACATATCCACCAATGGACGTGAAACTCCCACACGAACT
GAATGTGTACCAGGATATATTTAAAGAGTTCTATTTGAGCAAGTACAGTGGAAGGCGTTT
AATGTGGCAGAATTCTTTGGGACATTGTGTCTTGAAAGCGGACTTTCCCAAAGGCAAAAA
GGAACTTGCAGTGTCATTGTTTCAGAGTGTGGTTTTGATGTTGTTCAATGATGCACAAAA
GTTAAGTTTCCTTGACATCAAAGATTCCACTGGTATCGAGGATAAAGAATTGAGACGGAC
ACTGCAATCACTTGCATGTGGTAAAGTTCGGGTTCTCCAAAAGATACCAAAAGGGAGAGA
TGTAGAAGATAAGGATGAATTTGTATTCAATGAAGATTTTAGTGCTCCCCTCTATCGCAT
AAAGGTAAATGCAATTCAAATGAAGGAGACGGTAGAAGAAAACACGAGCACCACTGAGAG
AGTGTTCCAGGATCGGCAGTATCAGGTTGATGCAGCCATAGTTCGAATAATGAAGACGCG
GAAGGTCCTCAGCCACACCCTTCTAATAACGGAGCTTTACCAGCAGCTCAAGTTCCCTGT
TAAGCCAGCTGATATCAAGAAAAGAATAGAGAGCTTGATCGACCGGGAGTACCTGGAACG
GGACAGGAGTAACCCCCAGATCTACAACTATCTGGCTTGACAGCGCTTTGGCGGACCATT
AAAGACACTATGCTCACTTTATTATGGGAAAAGACATTGTAAATTAATTTATTTTCCAGT
TCCTTGGTCTTGTTTTTGTTTTCTGGGAGGGAGTTGTAGCTGTTGCAACGTGTCTGTATA
CGAGAACGATTTTTTCGGTATCAGTATAAAAATGTATAAGCATATAACGCGTGTATGTGT
TTACTACATGTTTGCTTTGGCTATTCACGTCCTCTTC