Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93309
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:4485263:4490388:-1 gene:SORBI_3001G059900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGAGAAGAGAGCAACAAGAAGAGCAAGCTCTCCTGGTCGAAATCCCTCGTGAGGAAG
TGGTTCAACATCAAGAGTAAGGCGCAGGAATTCCATGCGGATTGCGACGCCGCCCAAGGG
AGGGACGGGCATGGCACTGAATGGAGGACCAGCTGCTCAGAGAGGGAGGCAGGCGCGGCC
AAGAAAAGCAGAACTGACCGGTCGTCGAAGCGGAGTAGTATGGACCGAACCCGAGGAGGA
AAAAACGACGTTGTCGATGTGGCATGCCTCACAGAAGTTCAGAATTACAGAATCTTTGCC
TCCACATGGAATGTCGGCGGTAAATCCCCACCAAGGGGATTGAATCTTGACGACTGGCTC
CATTCTTCACCTCCAGCTGATATCTATGTGTTAGGATTTCAAGAAATTGTTCCTTTGAAT
GCTGGAAATGTTCTTGGCACTGAAGATAATCTCCCAGCGAAAAAATGGGTATCGCTTGTC
AGGAGGACACTGAACAAGAATCCTGGCTCATGCTGTTATGGTGGCTACCGCACACCATCT
CCTGTCCCTGATCCAGTTGTAGAACAAGATGCTGATTTTGAGGGATCATCGAGAAGGCAG
GACAGTTTATCCTATTTGCATCGTCGGTCATTCAACCTTAGCCGGAGTTTAAGAGTTGAA
AGGAACCATATGCTGTCACATCCAAGGTTGGATCGTAGGTTCAGTGTCTGTGACCCAGTT
AGCTTGGGAGGGAGGCCAAGTGATTTTGATGGGAACTTCCCATTCATGGGGTCACCAGAT
GATCATTGTATCGAGGAGGATACAAGCAATGGAGCATATTTTTCACCCTTCCCATATGGC
TATGGTGCCTGCGCACCTATGGAAGAAAATGATTATCAGACAAATACATCTAGGTACTGT
TTGGTTGCCAGCAAGCAGATGGTTGGTATATTTCTCACCATTTGGGTACGCAGCGAAATA
AGAAATGATGTGAGAAACCTGAAAGTTTCTTGTGTGGGTAGGGGACTAATGGGTTATCTT
GGAAATAAGGGGTCTATATCCATAAGCATGTCTTTGCACCACACAACCTTTTGTTTTGTC
TGTTGTCATTTGACCTCCGGTGAAAAGGAGGGAGATGAACTTCGGAGGAATTCTGATGTT
ATGGAAATTCTAAGGAAGACTAGATTTCCACAGGTCCGTGGTGCTGCTGATGTCAAGTCA
CCAGAAACAATTCTTGAGCATGATCGTATCATTTGGCTTGGGGATTTGAATTATCGGATT
GCTCTTTCGTACTGCTCAGCTAAAGCTCTTGTTGAAATGCATAGTTGGAAACAACTATTG
GAGAAAGATCAGCTACGGATAGAACGAAGATGTGGGCGTGTTTTCCAGGGATGGAAAGAA
GGCAGGATTTATTTTCCTCCAACATATAAATACTCATTCAACTCAGATCGTTATTCTGGT
GTGCGTCCCAAAGAAAAGCGGAGAACACCTGCTTGGTGTGATCGCATTTTGTGGTATGGT
AATGGCCTCATGCAATTGTCCTATGTTCGCGGAGAGTCTCGCTTCTCTGACCACAGGCCA
GTGTACAGTATTTTCATGGCTGAGGTTGAAAGTATCCGCCACAGAAGAAGAAACGTGGGC
TATTTCAGCTCTAGAATTGAGGTGGAAGAGCTTTTGCCATATCCGTACAGCTCTGGAGAA
ATGAAGTTCTACTAA

Peptide Sequence

PEP ID

EER93309
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:4485263:4490388:-1 gene:SORBI_3001G059900 transcript:EER93309 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MREESNKKSKLSWSKSLVRKWFNIKSKAQEFHADCDAAQGRDGHGTEWRTSCSEREAGAA
KKSRTDRSSKRSSMDRTRGGKNDVVDVACLTEVQNYRIFASTWNVGGKSPPRGLNLDDWL
HSSPPADIYVLGFQEIVPLNAGNVLGTEDNLPAKKWVSLVRRTLNKNPGSCCYGGYRTPS
PVPDPVVEQDADFEGSSRRQDSLSYLHRRSFNLSRSLRVERNHMLSHPRLDRRFSVCDPV
SLGGRPSDFDGNFPFMGSPDDHCIEEDTSNGAYFSPFPYGYGACAPMEENDYQTNTSRYC
LVASKQMVGIFLTIWVRSEIRNDVRNLKVSCVGRGLMGYLGNKGSISISMSLHHTTFCFV
CCHLTSGEKEGDELRRNSDVMEILRKTRFPQVRGAADVKSPETILEHDRIIWLGDLNYRI
ALSYCSAKALVEMHSWKQLLEKDQLRIERRCGRVFQGWKEGRIYFPPTYKYSFNSDRYSG
VRPKEKRRTPAWCDRILWYGNGLMQLSYVRGESRFSDHRPVYSIFMAEVESIRHRRRNVG
YFSSRIEVEELLPYPYSSGEMKFY

Transcript Sequence

Transcript ID

EER93309
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:4485263:4490388:-1 gene:SORBI_3001G059900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACCTTTCCTTGCTCCGAAGACCCACCCTCCCCAGCTCGTGCCATTACTGCCCATTATTA
AGCTTAAGCAGCAGCGGCTTGGATTTGAGCGAGCAGGCCGAGAGCGGGGCGTGATTAGAT
TAGAAAACCCAAAGCACGGAGACAGAGAGATGGGCACGCAGGTTGGGGGATAAAAGAGGC
AGGGGAACGGGGAACCAGAGAGAGAGAGAAAGAGAGGGCAGCAGATCAGGGGTGGGCATT
GCATCTCGCTTTCGCATTGCACTTGCACGCACCACCATACGCCGCACTGCTGAGCTCTAC
GCCTACTCCTAGTCCTGTACAAAACCTGCTCCGGCGTCTGGCTGTACCGCTAGCCTTAAC
CCCTAGAGCGAGACGGAGGCCTACGGAGGAGGAGGGAGGAGGAGAGGGCGTTCAGGATTT
CAGGAGCAAAGTGCAGACTGCACAGCGGTGCTGTGCCTTGCCATACCGCTACGGCCGTGC
TAGGCTGTGCTGCCGCAGAGGCGCCGAGGCGGGGCATTCGTTCCTCTCCGTTACGAGGAG
AGGGCGAGAGGAGGAAGATTTGGTGGGGGGTTTTTCACCGCAAGGAAAGATGGATTCTTG
ATCCCCGGCGCGGCTGGTTTGTTGCGGCAAGCTGAAGCATTTTGCTCGGCAGTCGATCCG
GTCCAGGATTCGCGGCTCCCGGGTCAGAATCTTGCCCTGAGGGGCGAAATTTCTGCGGGA
TTTGAGGTTTCCTTCCTCCAGCGACGCGCCCTGCCTTGTCAGGAGTCGAGGAGGGACGGT
GGGTAGGAGGAGCGCGGGGTTCTTCCATTGCTGTGGTTCGTGGTTTCTGGGAGTTATTAT
GAGACAATGAGAGAAGAGAGCAACAAGAAGAGCAAGCTCTCCTGGTCGAAATCCCTCGTG
AGGAAGTGGTTCAACATCAAGAGTAAGGCGCAGGAATTCCATGCGGATTGCGACGCCGCC
CAAGGGAGGGACGGGCATGGCACTGAATGGAGGACCAGCTGCTCAGAGAGGGAGGCAGGC
GCGGCCAAGAAAAGCAGAACTGACCGGTCGTCGAAGCGGAGTAGTATGGACCGAACCCGA
GGAGGAAAAAACGACGTTGTCGATGTGGCATGCCTCACAGAAGTTCAGAATTACAGAATC
TTTGCCTCCACATGGAATGTCGGCGGTAAATCCCCACCAAGGGGATTGAATCTTGACGAC
TGGCTCCATTCTTCACCTCCAGCTGATATCTATGTGTTAGGATTTCAAGAAATTGTTCCT
TTGAATGCTGGAAATGTTCTTGGCACTGAAGATAATCTCCCAGCGAAAAAATGGGTATCG
CTTGTCAGGAGGACACTGAACAAGAATCCTGGCTCATGCTGTTATGGTGGCTACCGCACA
CCATCTCCTGTCCCTGATCCAGTTGTAGAACAAGATGCTGATTTTGAGGGATCATCGAGA
AGGCAGGACAGTTTATCCTATTTGCATCGTCGGTCATTCAACCTTAGCCGGAGTTTAAGA
GTTGAAAGGAACCATATGCTGTCACATCCAAGGTTGGATCGTAGGTTCAGTGTCTGTGAC
CCAGTTAGCTTGGGAGGGAGGCCAAGTGATTTTGATGGGAACTTCCCATTCATGGGGTCA
CCAGATGATCATTGTATCGAGGAGGATACAAGCAATGGAGCATATTTTTCACCCTTCCCA
TATGGCTATGGTGCCTGCGCACCTATGGAAGAAAATGATTATCAGACAAATACATCTAGG
TACTGTTTGGTTGCCAGCAAGCAGATGGTTGGTATATTTCTCACCATTTGGGTACGCAGC
GAAATAAGAAATGATGTGAGAAACCTGAAAGTTTCTTGTGTGGGTAGGGGACTAATGGGT
TATCTTGGAAATAAGGGGTCTATATCCATAAGCATGTCTTTGCACCACACAACCTTTTGT
TTTGTCTGTTGTCATTTGACCTCCGGTGAAAAGGAGGGAGATGAACTTCGGAGGAATTCT
GATGTTATGGAAATTCTAAGGAAGACTAGATTTCCACAGGTCCGTGGTGCTGCTGATGTC
AAGTCACCAGAAACAATTCTTGAGCATGATCGTATCATTTGGCTTGGGGATTTGAATTAT
CGGATTGCTCTTTCGTACTGCTCAGCTAAAGCTCTTGTTGAAATGCATAGTTGGAAACAA
CTATTGGAGAAAGATCAGCTACGGATAGAACGAAGATGTGGGCGTGTTTTCCAGGGATGG
AAAGAAGGCAGGATTTATTTTCCTCCAACATATAAATACTCATTCAACTCAGATCGTTAT
TCTGGTGTGCGTCCCAAAGAAAAGCGGAGAACACCTGCTTGGTGTGATCGCATTTTGTGG
TATGGTAATGGCCTCATGCAATTGTCCTATGTTCGCGGAGAGTCTCGCTTCTCTGACCAC
AGGCCAGTGTACAGTATTTTCATGGCTGAGGTTGAAAGTATCCGCCACAGAAGAAGAAAC
GTGGGCTATTTCAGCTCTAGAATTGAGGTGGAAGAGCTTTTGCCATATCCGTACAGCTCT
GGAGAAATGAAGTTCTACTAATTTGGCTGACACAGGCATATGGCTGGAGCTTGTTTTCTC
TTTCAACTCAAGGTAGGCTTAGTCGATTCTCGATAAAACTGCTTGCTTTTTACATGTATT
CCCTTGTATTGACACAGCTGCGCTGATGACACAGGTTGCTGGGTCCTTGAACAATAACTG
GGGATGTAGATTGGTTGGATGATCAGGTGTAAACCTGCCTATTTTTTTCATCTGACTTTC
ATAGCTTCCAGTCAGACGGTTGACATTGCACAAAAACTAACATAAAGGTAACTTCTTTTG
CTGGTGATTTGTTGCAAAAATCTAGAACTCCTCAATAGTCCAAAATCCTAATACGGTGTT
CTCTGCTGGTTGGCCTGTTTTGCAGGATAGTTGGGCAATTTTGCAAGTAACCATTTGCCT
GTGGACAGCCATGTTGAAACAAGGATCGGCCCACATCTGTACATTAACCACACAGCTCAG
AAGAAAAAAAAAACCTTTTCCCCCATTTGGTTCTCATTTTTTAGGGATGTTAATGAACAT
ACATTTTTTTTTCTTCTCCCTTTGCCTTCGGGAAATCTGTTAGAATGAGATTTTTGGGTG
TATCAGCATGAGCATGACGTGTAAAATCATTGCAAATCGGCAAAAGGTGAAATGATGCTT
GAATTGAACTGATCCTTGATCATGATCTCCAGTGCTGAGGGAACAGTTATAGATTGATGT
GACTTCAGAGGTTTGCAAAGGTGTAATCATGTGCATACCCTTTTTTTATCTTTGTCCCTG
TGGTGTAGTACCTGAGAAGCAAAATGATGCCTGCATTTGCCGTGCTCATTGCTGTGGCAG
GGGGAGAAAAAAAATACAGTTCTGTTAAACCTTTTTCTAATTCTACAGGTCAG