Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93301
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:4404360:4406499:-1 gene:SORBI_3001G058400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGTCCGCGCCCCTAACCGCCACGCCTGCCCCTCTCCTTCCCGCCAAGCCCAAGAGC
CCACCACCGCAGCAGCACCCGGTCCTCTCCCACCTCCCGCACTGCACCAGTCTCCGCACG
CTTGCCCAGCTCCACGCCGCCGCCGTCAAGGCCGGCCTCGCCGCGCACCCGGCCTTGGTC
ACCAGGCTCCTCACGCTCTGCACGGGCCCAGACGCGGGGCCCGCCCACCTCGCATACGCC
CGTCAGGTTTTCGACAGGGTGCCCCACCCGGCGGACGCCGTCTGGTACAACACCCTGCTC
CGCGGCTACGCGCGCTCCTCCAACCCCTCCTCCTCGGAGGCGGCGGCGGCGGTGCGGGTG
TTCGTGCGGATGCTGGAGGAGGGCGTCGCGCCGGACACGTACACGTTCGTGTCGCTGCTC
AAGGCGTGCGCCGCGGCGCGCGCGGGGGAGGAAGGGCGGCAGGCGCACGCCCTGGCGGTC
AAGCTCGGCGCCGCGGACCACGACTACGTCCGCCCCACGCTCATCAACATGTACGCCGAG
TGCGGGGACGCGCGCGCCGCGCGCGTCATGTTTGGCGGGACGGACGGGGGCTGCGTCGTC
TCGTACAACGCGATGATCGCCGCTGCTGTCAGGAGCAGCCGGCCTGGGGAGGCGCTGGTG
CTGTTCCGGGAGATGCAGGGCAAGGGGCTCAAGCCGACGTCCGTCACGGTGATCAGTGTG
CTCTCAGCGTGCGCGTTGCTTGGGGCGCTCGAACTGGGGAGGTGGGTCCATGATTATGTT
CGGAAGATAGGGCTCGGTTCCCTCGTCAAGGTCAGCACTGCGCTGATTGACATGTATGCA
AAGTGTGGGAGCTTGGAGGACGCCATTGATGTGTTCCAGGGGATGGAGTCAAAAGATAGG
CAAGCTTGGTCAGTGATGATCGTGGCATATGCTAACCATGGCTATGGCAGGGAGGCCATT
TCGCTGTTTGAAGAGATGAAGAAGGAAGGGATGAAGCCTGATGATATTACATTCCTTGGT
GTGCTCTACGCCTGTAGCCACTCTGGTCTGGTGAGTGAAGGGCTTCAGTATTTCGACGAT
ATGAAAGATCATGGAATTGTTCCAGGGATCAAGCACTATGGTTGTGTGACGGATTTACTA
GCTCGTTCAGGGCAGCTAGAAAGAGCTTATAAGTTTATTGATGAACTGCCAATAAATCCC
ACCCCCATCTTATGGAGGACGTTGCTTTCTGCTTGTGGAGGCCATGGAGATTTCGAACTT
GGCAAGCGCGTCTTTGAGAGGATTCTTAAGCTGGACGATTCTCATGGTGGTGACTATGTA
ATATTCTCGAATTTGTGTGCAAACACTGGATACTGGGAAGAGATGAATATGGTAAGAAAA
CTGATGAGCGAAAAAGGTGTGGTAAAGGTGCCTGGCTGCAGCTCAATCGAGATAGATAAC
ACAGTTCATGAGTTCTTCGCAGGAGATGGAAGGCACCCCAAATCACAAGAAGCACGGAAA
ATGGTTGATGAAGTGATCGATCAACTAAAACTTGTTGGTTATGTCCCTAATACTTCACAT
GTGTTTCATGTCGAAATGGGTGAGGAGGAGAAGGCAATAAGCCTAAAATACCATAGTGAG
AAGCTGGCAATTGCTTTTGGGCTTCTAAATACTGCCCCAGGAGCTACACTGCGTGTTGTG
AAGAATCTCCGCGTATGCCCAGATTGCCACTCAATGGCAAAGCTTGTCTCAATGGTCTTC
AATAGGCGAATTATACTCAGAGATCTGAACCGCTTCCATCACTTTGAAGAAGGGATCTGT
TCTTGCGGTGACTATTGGTAG

Peptide Sequence

PEP ID

EER93301
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:4404360:4406499:-1 gene:SORBI_3001G058400 transcript:EER93301 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSSAPLTATPAPLLPAKPKSPPPQQHPVLSHLPHCTSLRTLAQLHAAAVKAGLAAHPALV
TRLLTLCTGPDAGPAHLAYARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRV
FVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAE
CGDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISV
LSACALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDR
QAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDD
MKDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFEL
GKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDN
TVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYVPNTSHVFHVEMGEEEKAISLKYHSE
KLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEEGIC
SCGDYW

Transcript Sequence

Transcript ID

EER93301
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:4404360:4406499:-1 gene:SORBI_3001G058400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GATCAGGCCCAGGGGCCCATCTGCAGCTTCTCAGTAGAGAGTAGAGACCCCAAAACCGTC
GCTAATCTCTTCTCCGGTGATCCCCTTTGGCTCACGTCCTCCCGACGATAACGGGACGGG
TGGGCGGCCATGTCGTCCGCGCCCCTAACCGCCACGCCTGCCCCTCTCCTTCCCGCCAAG
CCCAAGAGCCCACCACCGCAGCAGCACCCGGTCCTCTCCCACCTCCCGCACTGCACCAGT
CTCCGCACGCTTGCCCAGCTCCACGCCGCCGCCGTCAAGGCCGGCCTCGCCGCGCACCCG
GCCTTGGTCACCAGGCTCCTCACGCTCTGCACGGGCCCAGACGCGGGGCCCGCCCACCTC
GCATACGCCCGTCAGGTTTTCGACAGGGTGCCCCACCCGGCGGACGCCGTCTGGTACAAC
ACCCTGCTCCGCGGCTACGCGCGCTCCTCCAACCCCTCCTCCTCGGAGGCGGCGGCGGCG
GTGCGGGTGTTCGTGCGGATGCTGGAGGAGGGCGTCGCGCCGGACACGTACACGTTCGTG
TCGCTGCTCAAGGCGTGCGCCGCGGCGCGCGCGGGGGAGGAAGGGCGGCAGGCGCACGCC
CTGGCGGTCAAGCTCGGCGCCGCGGACCACGACTACGTCCGCCCCACGCTCATCAACATG
TACGCCGAGTGCGGGGACGCGCGCGCCGCGCGCGTCATGTTTGGCGGGACGGACGGGGGC
TGCGTCGTCTCGTACAACGCGATGATCGCCGCTGCTGTCAGGAGCAGCCGGCCTGGGGAG
GCGCTGGTGCTGTTCCGGGAGATGCAGGGCAAGGGGCTCAAGCCGACGTCCGTCACGGTG
ATCAGTGTGCTCTCAGCGTGCGCGTTGCTTGGGGCGCTCGAACTGGGGAGGTGGGTCCAT
GATTATGTTCGGAAGATAGGGCTCGGTTCCCTCGTCAAGGTCAGCACTGCGCTGATTGAC
ATGTATGCAAAGTGTGGGAGCTTGGAGGACGCCATTGATGTGTTCCAGGGGATGGAGTCA
AAAGATAGGCAAGCTTGGTCAGTGATGATCGTGGCATATGCTAACCATGGCTATGGCAGG
GAGGCCATTTCGCTGTTTGAAGAGATGAAGAAGGAAGGGATGAAGCCTGATGATATTACA
TTCCTTGGTGTGCTCTACGCCTGTAGCCACTCTGGTCTGGTGAGTGAAGGGCTTCAGTAT
TTCGACGATATGAAAGATCATGGAATTGTTCCAGGGATCAAGCACTATGGTTGTGTGACG
GATTTACTAGCTCGTTCAGGGCAGCTAGAAAGAGCTTATAAGTTTATTGATGAACTGCCA
ATAAATCCCACCCCCATCTTATGGAGGACGTTGCTTTCTGCTTGTGGAGGCCATGGAGAT
TTCGAACTTGGCAAGCGCGTCTTTGAGAGGATTCTTAAGCTGGACGATTCTCATGGTGGT
GACTATGTAATATTCTCGAATTTGTGTGCAAACACTGGATACTGGGAAGAGATGAATATG
GTAAGAAAACTGATGAGCGAAAAAGGTGTGGTAAAGGTGCCTGGCTGCAGCTCAATCGAG
ATAGATAACACAGTTCATGAGTTCTTCGCAGGAGATGGAAGGCACCCCAAATCACAAGAA
GCACGGAAAATGGTTGATGAAGTGATCGATCAACTAAAACTTGTTGGTTATGTCCCTAAT
ACTTCACATGTGTTTCATGTCGAAATGGGTGAGGAGGAGAAGGCAATAAGCCTAAAATAC
CATAGTGAGAAGCTGGCAATTGCTTTTGGGCTTCTAAATACTGCCCCAGGAGCTACACTG
CGTGTTGTGAAGAATCTCCGCGTATGCCCAGATTGCCACTCAATGGCAAAGCTTGTCTCA
ATGGTCTTCAATAGGCGAATTATACTCAGAGATCTGAACCGCTTCCATCACTTTGAAGAA
GGGATCTGTTCTTGCGGTGACTATTGGTAGATTTTTAGGAACAAAATTCTTGTACCTCAA
TATCTTGTATTGCAATGCCTTCCACTCAGGTATGGTGAATCTGTATATCCATGGAAAACC
TACTGACGACTGATGATTCTTTTTATGAATATTATTGGCACTGAATGATACTAGGTTATG
TAACCTTGAATTTTCTGTTGAATATCCAATTATAGCCAAA