Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93277
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:4050198:4055183:-1 gene:SORBI_3001G054100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCTTCTCCTCCATCCCCGCCTCCCCTCCCACCCTCTCCGCGCGGCAGCCCACCAC
CACCACGCCATCTCGGACGCCTCTTGCGTCCTTACCCTCCCCGGCCCCGGAAGGAAGCGC
ACGCTGCTCGCGGCGGTCACGTGCTGCGCGGCCAGGGTCAAGGAGCCCGCTCCGAGTGCA
GGCGCCTTGCCGCCGCCGCCGCAGGCGCTGGCGAAGGAGGCGCACAAGTACTTCGACCAC
GCCGTGGTCACCGTCCGCGCGGGCGACGGCGGGCACGGCGCCGTGCTCGCCATGCCGCCG
CCGCCCTCCGCGGACGCCGCCAAGCCTCGCGGCAGGTTCAACAGGGGCGAGAAGAAGAGC
AAGAAGGTGTCATACAAGCGCAACTACGACGGGTCCGTGGCGCTGCCGATGGGCGGGCAC
GGCGGCGACGTCGTGGTGTACGCCGACGAGGCCGAGGAGACGCTGCTGCGGTTCCACGAG
AAGGCGCGGTACTGCGCTAAACGGGGAGGAAACGTGGGCGCCGCTGGCGGCACGCTCAGC
TCGCGGATGCACAGCGGGTTCGCTGGGGAGACGCTCAGGATACCCGTGCCTGTAGGAACT
GTTGTGAAACGCAAGAAGGGGGCTGTTCTGGCGGATTTGGCTCATCCCGGTGATGAAGTG
CTCGTTGCTAGAGGAGGCCAGGGCGGGATCAGCTTGATAGATGTGCCTGAGTACAGGAGG
AGGAAAGCCATGGCCTTATCCCCAAATATTATGCGAGATACTAGCGACAAAGTATTAACT
CATGGTCAGCCTGGTGAGGAAGTAAGCTTGGAGTTGATCTTAAGGGTAGTTGCTGATGTT
GGCCTTGTGGGACTTCCAAATGCTGGAAAATCAACACTTCTATCAGCTATAACACTTGCA
AGACCAGACATTGCTGATTATCCGTTCACTACATTAATGCCCAATCTTGGCCGGCTTGGT
GGAGATCCTGCTTTAGGGGCCTTACAGTTTTCTTCAGAAGCAACATTGGCAGACTTGCCA
GGTCTAATTGAGGGCGCTCATCTAGGAAAGGGTCTTGGCCGCAATTTCTTAAGACATTTA
AGGAGAACTAGAGTAATCGTCCATGTTGTCGATGCTGCTGCAGATGACCCTGTCAATGAT
TATAAGATTGTCAGAGAAGAATTAAGGATGTATAACCCCCAATACCTGGAGCGACCTTAT
GTTGTGGTCCTGAACAAGATTGATCTTCCTAAGGCTAATGATAGGCTATCATCACTGGCC
TTAGAGATATCTTCAATTGGATGTGAAGAAGGACATGACCAAAGTGGCAGCAAAGATAAC
CTACATGGACACGTAAGCAATCATCAGGTCTTATCAGAGGCTAAAGTTGAAGGTGGCGAA
AAGGAGCTTGGGGACTATCCAAGACCTCAAGCTGTTGTGGCTGCTAGCGTATTGAGGCAT
ATTGGGATCGACGAGATGCTGAAGGAGATAAGGGCTGCCCTGAGAAAATGCTTTGATCAC
AAGTTACCAGAACCTTGA

Peptide Sequence

PEP ID

EER93277
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:4050198:4055183:-1 gene:SORBI_3001G054100 transcript:EER93277 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALLLHPRLPSHPLRAAAHHHHAISDASCVLTLPGPGRKRTLLAAVTCCAARVKEPAPSA
GALPPPPQALAKEAHKYFDHAVVTVRAGDGGHGAVLAMPPPPSADAAKPRGRFNRGEKKS
KKVSYKRNYDGSVALPMGGHGGDVVVYADEAEETLLRFHEKARYCAKRGGNVGAAGGTLS
SRMHSGFAGETLRIPVPVGTVVKRKKGAVLADLAHPGDEVLVARGGQGGISLIDVPEYRR
RKAMALSPNIMRDTSDKVLTHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLSAITLA
RPDIADYPFTTLMPNLGRLGGDPALGALQFSSEATLADLPGLIEGAHLGKGLGRNFLRHL
RRTRVIVHVVDAAADDPVNDYKIVREELRMYNPQYLERPYVVVLNKIDLPKANDRLSSLA
LEISSIGCEEGHDQSGSKDNLHGHVSNHQVLSEAKVEGGEKELGDYPRPQAVVAASVLRH
IGIDEMLKEIRAALRKCFDHKLPEP

Transcript Sequence

Transcript ID

EER93277
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:4050198:4055183:-1 gene:SORBI_3001G054100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAACCAATGAGTTAATATAAATTCAATCGTTAATTTTAGCAAAATGAGGTAGTAAAATGG
AGAAAAAAAGGAATTGACTTTATTAGACCGGTGTCATCCTTCGTTGAGGCCATTCTCAAT
AGAGAGATTTTTTTTGTGTTGTTTCCAAAACCGTTACACCATATAAAAATAAAATGAAAT
ATAAGTGAAACATTTATTCTCAATGCATAGTTACATAAACATTTATGGTGTATTTGGTTT
ATGAAGTCATCTCATGTTTTATGAGGTAATGTATCGTGAGTTAATTCTATGAATTTTGGT
AAAATCAACTCGTTCCTCATATTAGTAATAATTAGTTTGTGAGAAATAAGATGGTGATAG
ATCAACTCGATCAATTACACAAATCGAATAAAAAAAGGGGAAAGTAAGAAGAACATAAAC
CATATCGTTTCTCGGACCAAACATTTCATGACTCATCTCTCTTCTTAAAAATACTGCCAT
ATCATTAAAAATATCTTTCTGTAAATAAATAAACATGAGAAAAATAGGAGATAAACTCCG
CATGACCCTCACTCGCTCGTTCTGATCAACCGACGACCAGGAATGGGTTCGTCGTAGCCG
TCCAACGGCGGACGCTGCGCCGCAACTTGGCTTATCAGTTATCTTCCACCCCGCTTTGGT
GCTGCAGTGGCGCAGCGCAGCCACGCCGCGGCAACAGCAGCAGCCAGCAGCCCAGCACCA
CCACCACCACCACCATGGCGCTTCTCCTCCATCCCCGCCTCCCCTCCCACCCTCTCCGCG
CGGCAGCCCACCACCACCACGCCATCTCGGACGCCTCTTGCGTCCTTACCCTCCCCGGCC
CCGGAAGGAAGCGCACGCTGCTCGCGGCGGTCACGTGCTGCGCGGCCAGGGTCAAGGAGC
CCGCTCCGAGTGCAGGCGCCTTGCCGCCGCCGCCGCAGGCGCTGGCGAAGGAGGCGCACA
AGTACTTCGACCACGCCGTGGTCACCGTCCGCGCGGGCGACGGCGGGCACGGCGCCGTGC
TCGCCATGCCGCCGCCGCCCTCCGCGGACGCCGCCAAGCCTCGCGGCAGGTTCAACAGGG
GCGAGAAGAAGAGCAAGAAGGTGTCATACAAGCGCAACTACGACGGGTCCGTGGCGCTGC
CGATGGGCGGGCACGGCGGCGACGTCGTGGTGTACGCCGACGAGGCCGAGGAGACGCTGC
TGCGGTTCCACGAGAAGGCGCGGTACTGCGCTAAACGGGGAGGAAACGTGGGCGCCGCTG
GCGGCACGCTCAGCTCGCGGATGCACAGCGGGTTCGCTGGGGAGACGCTCAGGATACCCG
TGCCTGTAGGAACTGTTGTGAAACGCAAGAAGGGGGCTGTTCTGGCGGATTTGGCTCATC
CCGGTGATGAAGTGCTCGTTGCTAGAGGAGGCCAGGGCGGGATCAGCTTGATAGATGTGC
CTGAGTACAGGAGGAGGAAAGCCATGGCCTTATCCCCAAATATTATGCGAGATACTAGCG
ACAAAGTATTAACTCATGGTCAGCCTGGTGAGGAAGTAAGCTTGGAGTTGATCTTAAGGG
TAGTTGCTGATGTTGGCCTTGTGGGACTTCCAAATGCTGGAAAATCAACACTTCTATCAG
CTATAACACTTGCAAGACCAGACATTGCTGATTATCCGTTCACTACATTAATGCCCAATC
TTGGCCGGCTTGGTGGAGATCCTGCTTTAGGGGCCTTACAGTTTTCTTCAGAAGCAACAT
TGGCAGACTTGCCAGGTCTAATTGAGGGCGCTCATCTAGGAAAGGGTCTTGGCCGCAATT
TCTTAAGACATTTAAGGAGAACTAGAGTAATCGTCCATGTTGTCGATGCTGCTGCAGATG
ACCCTGTCAATGATTATAAGATTGTCAGAGAAGAATTAAGGATGTATAACCCCCAATACC
TGGAGCGACCTTATGTTGTGGTCCTGAACAAGATTGATCTTCCTAAGGCTAATGATAGGC
TATCATCACTGGCCTTAGAGATATCTTCAATTGGATGTGAAGAAGGACATGACCAAAGTG
GCAGCAAAGATAACCTACATGGACACGTAAGCAATCATCAGGTCTTATCAGAGGCTAAAG
TTGAAGGTGGCGAAAAGGAGCTTGGGGACTATCCAAGACCTCAAGCTGTTGTGGCTGCTA
GCGTATTGAGGCATATTGGGATCGACGAGATGCTGAAGGAGATAAGGGCTGCCCTGAGAA
AATGCTTTGATCACAAGTTACCAGAACCTTGAGCAAAGCAAGTTAGCGTAACATAGGCTT
AGTACCATAGTCCAGTTCCTGTAGCAGAAAAGGGAATGATCTGGATGCCTCCTGGCACAT
ACTGAAGAATCTCCAACGGCAGTAAAATCCATGGAGAGTTTTCTGAAGCAACCGGAAGTC
TGATATCTGACTTGGAGCGCGTCAGTTTTTAAGCTCCGTTTGTAACATGGGTCCTCCATT
GAAATTTCTGGGAAATTGAACTGTGTCCGTCCACAGCAGCTGTTTATAGACGACAATACA
ACATGTGTGAATAGATTAGTTTGGGTTACGTCGACGCTGTCAGTGTATCATTCATTCATC
TCCAATATGCACAGATGC