Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93230
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:3249492:3256933:-1 gene:SORBI_3001G043400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGATGATGAGCCGGACGCGGGACCTGCTGGTGGAGGGGTTCGAGGGGCTTGTGCGG
GATGGGTCGTTCAAGTGGGGCCCCCGCCGCGGGGACACGGCCCTGGACGACGGCGACGAC
GACGACGGCTCCCTCTCCGTGCAGCGCTCCTCCATCCCCGGCCTTTCCTTCAAGGCCAAC
GCCGTCGTCGCCCGCTGCTCTAGGATCCTTGGCGTTTCTATCAACGATCTGCGAAGTAAC
TTTGATAAGCAAGCATCTGATTCCGTAAAGCAACAAAGAAGCTACGCAAGAAACTTTTTG
GAGTACTGCTGCTTCATGGCACTTGCTCAGATATCACAAGTCACAGGGTATCTTGCTGAC
AAAAACTTTCGCCGCTTATCTTTTGACATGATGCTAGCTTGGGAGGTCCCCTCTTCCTCA
AGCCAGCTCACTGTTAAGGTTGAGGTAGATAGCACAGTTAGCTTAGAAGCTTTTACAAGA
ATAGCACCTGCCATCCCAACCATTGCTGATGTAGTAACTTGTGCAAATCTCTTCGATGTA
CTTTCATGTTCGACCGGAGGCCGTCTTTCATTTTCTGTATACGAGAAGTACCTTTCAGAA
TTGGACAGAGCGGTTAAAAAGATGAAGACACAATCTGAGTCGTCACTTCTATCAAACTTT
CGGTCTCAGAGAGGAGAAAGGATTCTGGAAGTTGATGGGACATTGACAACACAACCAGTA
CTTGAACATGTGGGTATTTCAACATGGCCAGGAAGATTAATACTCACAGATCATGCTCTT
TACTTCGAAGCTCTTCGGGTTGTTACCTATGATAAGCCCAAAGTTTATGAGCTTGCAGAA
GATTTGAAGCAGGTCGTTAAACCTGAGCTGACTGGTCCATGGGGTTCACGTCTCTTTGAC
AAAGCTGTTATGTACAAATCAACAACCTTAACAGAGCCTGTGATCATAGAATTTCCGGAG
TTGGCTGGCCATTCCCGTCGAGATTATTGGCTGGCCATTATATCAGAAGTACTTTATGCC
CATAGATTTATTAGGAAATTTGATATAAGTGGAGTTGACAAAGAGGATACAATTCTGAAA
GCAGTACTTGGTATTCTGCGGTTAGAAGCCATTGAAGAGTTACATTTTGAAGTTCCAAAT
CGATATGAATCGCTTTTGATGTTCAATCTATGTGACAAACTTCCTGGAGGTGATGTAATA
CTTGAAACATTAGCCAGTTCTATATCATCAAGAACTTCAGATCGAACTAACCAACCTGGC
ACAAGTAGAGGAATGCATGCTGTCCTGTCAAACCTGGGTGTGGTATCACCAGTTAATAGT
GGTGAGAGATTGTTTGTTGGTGAGATAGTTGTTGGGGGAATCAGTGCCTTGCAGAAGGCT
GTTACTGACTCAATGAACAACTATAAGAAGGTTGAACTGGCCCAAGCCTCGGTTGATGGA
GTCAAAGTTGATGGGCTTGATACAAACTTAGCAGTAATGAAGGAATTGTTATCCCCGGTA
AGTGAGCTTTGGAGGATTTTGCTATTGCTCACATCATGGGATGAGCCTATGAAGTCCATG
GTGTTTTGCTTTCTATTCTCTTACATTATCATCAGGGGGTGGGTAGTCTATTTTATTGTC
ACGGTGCTATTGTTTTCAGCAACGTTTATGTTTCTCACAAGATTAACTAATCAAGGAAAG
CAAATGAGTGAGGTAAAGGTGGTATCCCCACCTCCATTGAACACAATGGAGCAGCTCCTA
GCTGTTCAGAATGCCATTTCTAAAATTGAGGAGCTCGTCCAGGATGCAAATATTGTTCTT
CTGAAGATAAGAGCTCTATTGTTGGCTTTTCCATCCCAGGCGACGGACAAAGCTATTCTG
GCACTGGTACTGATGGCTCTGTGCCTTGCCATCGTTCCCACAAGAGTGCTTCTGCTGCTG
GTGTTTGTGGAGGTATCCACGAACCACTCACCACTACGAAAAGCAACCACAGAAAGGTGT
ACCAGAAGGTTGAGAGAGTGGTGGTTCAGCATACCTGCAGCTCCAGTGGTGGTGGAGAAG
GAGAAAGAAGACAAGAAGACAAGATGA

Peptide Sequence

PEP ID

EER93230
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:3249492:3256933:-1 gene:SORBI_3001G043400 transcript:EER93230 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAMMSRTRDLLVEGFEGLVRDGSFKWGPRRGDTALDDGDDDDGSLSVQRSSIPGLSFKAN
AVVARCSRILGVSINDLRSNFDKQASDSVKQQRSYARNFLEYCCFMALAQISQVTGYLAD
KNFRRLSFDMMLAWEVPSSSSQLTVKVEVDSTVSLEAFTRIAPAIPTIADVVTCANLFDV
LSCSTGGRLSFSVYEKYLSELDRAVKKMKTQSESSLLSNFRSQRGERILEVDGTLTTQPV
LEHVGISTWPGRLILTDHALYFEALRVVTYDKPKVYELAEDLKQVVKPELTGPWGSRLFD
KAVMYKSTTLTEPVIIEFPELAGHSRRDYWLAIISEVLYAHRFIRKFDISGVDKEDTILK
AVLGILRLEAIEELHFEVPNRYESLLMFNLCDKLPGGDVILETLASSISSRTSDRTNQPG
TSRGMHAVLSNLGVVSPVNSGERLFVGEIVVGGISALQKAVTDSMNNYKKVELAQASVDG
VKVDGLDTNLAVMKELLSPVSELWRILLLLTSWDEPMKSMVFCFLFSYIIIRGWVVYFIV
TVLLFSATFMFLTRLTNQGKQMSEVKVVSPPPLNTMEQLLAVQNAISKIEELVQDANIVL
LKIRALLLAFPSQATDKAILALVLMALCLAIVPTRVLLLLVFVEVSTNHSPLRKATTERC
TRRLREWWFSIPAAPVVVEKEKEDKKTR

Transcript Sequence

Transcript ID

EER93230
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:3249492:3256933:-1 gene:SORBI_3001G043400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACGTGTTGGTTATTTACCCCGTTTGCCACTGAGTCCTCCGCAAGCCATCTTTCGCGACA
TGGCGACACCCACGGCCACGCCCACGCACGACACGAGACAGAGATGAGGACGACGACGGC
GATCAGGATCAGGGTTTGAGCACGGACCCCCTCCATCGCCCGCCCCAATCTCTTCCTCCC
CCGTCAGCAACCCTTGCAGTCTCTGCTATCGTCAGGCCGCACGCGATCAAAGCCCCGCCG
CGCTGCGGCCAACCGTCTCCGGCACCGGATCCGCTGCCTCCCCCCTCCAGGATGGCGATG
ATGAGCCGGACGCGGGACCTGCTGGTGGAGGGGTTCGAGGGGCTTGTGCGGGATGGGTCG
TTCAAGTGGGGCCCCCGCCGCGGGGACACGGCCCTGGACGACGGCGACGACGACGACGGC
TCCCTCTCCGTGCAGCGCTCCTCCATCCCCGGCCTTTCCTTCAAGGCCAACGCCGTCGTC
GCCCGCTGCTCTAGGATCCTTGGCGTTTCTATCAACGATCTGCGAAGTAACTTTGATAAG
CAAGCATCTGATTCCGTAAAGCAACAAAGAAGCTACGCAAGAAACTTTTTGGAGTACTGC
TGCTTCATGGCACTTGCTCAGATATCACAAGTCACAGGGTATCTTGCTGACAAAAACTTT
CGCCGCTTATCTTTTGACATGATGCTAGCTTGGGAGGTCCCCTCTTCCTCAAGCCAGCTC
ACTGTTAAGGTTGAGGTAGATAGCACAGTTAGCTTAGAAGCTTTTACAAGAATAGCACCT
GCCATCCCAACCATTGCTGATGTAGTAACTTGTGCAAATCTCTTCGATGTACTTTCATGT
TCGACCGGAGGCCGTCTTTCATTTTCTGTATACGAGAAGTACCTTTCAGAATTGGACAGA
GCGGTTAAAAAGATGAAGACACAATCTGAGTCGTCACTTCTATCAAACTTTCGGTCTCAG
AGAGGAGAAAGGATTCTGGAAGTTGATGGGACATTGACAACACAACCAGTACTTGAACAT
GTGGGTATTTCAACATGGCCAGGAAGATTAATACTCACAGATCATGCTCTTTACTTCGAA
GCTCTTCGGGTTGTTACCTATGATAAGCCCAAAGTTTATGAGCTTGCAGAAGATTTGAAG
CAGGTCGTTAAACCTGAGCTGACTGGTCCATGGGGTTCACGTCTCTTTGACAAAGCTGTT
ATGTACAAATCAACAACCTTAACAGAGCCTGTGATCATAGAATTTCCGGAGTTGGCTGGC
CATTCCCGTCGAGATTATTGGCTGGCCATTATATCAGAAGTACTTTATGCCCATAGATTT
ATTAGGAAATTTGATATAAGTGGAGTTGACAAAGAGGATACAATTCTGAAAGCAGTACTT
GGTATTCTGCGGTTAGAAGCCATTGAAGAGTTACATTTTGAAGTTCCAAATCGATATGAA
TCGCTTTTGATGTTCAATCTATGTGACAAACTTCCTGGAGGTGATGTAATACTTGAAACA
TTAGCCAGTTCTATATCATCAAGAACTTCAGATCGAACTAACCAACCTGGCACAAGTAGA
GGAATGCATGCTGTCCTGTCAAACCTGGGTGTGGTATCACCAGTTAATAGTGGTGAGAGA
TTGTTTGTTGGTGAGATAGTTGTTGGGGGAATCAGTGCCTTGCAGAAGGCTGTTACTGAC
TCAATGAACAACTATAAGAAGGTTGAACTGGCCCAAGCCTCGGTTGATGGAGTCAAAGTT
GATGGGCTTGATACAAACTTAGCAGTAATGAAGGAATTGTTATCCCCGGTAAGTGAGCTT
TGGAGGATTTTGCTATTGCTCACATCATGGGATGAGCCTATGAAGTCCATGGTGTTTTGC
TTTCTATTCTCTTACATTATCATCAGGGGGTGGGTAGTCTATTTTATTGTCACGGTGCTA
TTGTTTTCAGCAACGTTTATGTTTCTCACAAGATTAACTAATCAAGGAAAGCAAATGAGT
GAGGTAAAGGTGGTATCCCCACCTCCATTGAACACAATGGAGCAGCTCCTAGCTGTTCAG
AATGCCATTTCTAAAATTGAGGAGCTCGTCCAGGATGCAAATATTGTTCTTCTGAAGATA
AGAGCTCTATTGTTGGCTTTTCCATCCCAGGCGACGGACAAAGCTATTCTGGCACTGGTA
CTGATGGCTCTGTGCCTTGCCATCGTTCCCACAAGAGTGCTTCTGCTGCTGGTGTTTGTG
GAGGTATCCACGAACCACTCACCACTACGAAAAGCAACCACAGAAAGGTGTACCAGAAGG
TTGAGAGAGTGGTGGTTCAGCATACCTGCAGCTCCAGTGGTGGTGGAGAAGGAGAAAGAA
GACAAGAAGACAAGATGAGATCTGTGTATATATATCCAATGTAATCTTGTGTCTCCTGCT
TGGCTGATGCATTGTGTGATGTATCAGCCACTGCCCACCTCTGTACAAAGACTGCTATAT
CAACAGCGAGGGCAAATTCAATGGAGATTTGCTCTCACTTATCTCAGTTGCCCTGTTTAC
ACGAATCATAGGCTAGTCTCAATGGTGAGTTTTTTTCTCACTTATATCAGCCAATGTTTT
GTTGGAAAATGGAAATTGACTAGAGCCGATGCCAATGTGAGTCGCC