Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93094
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:1031520:1034071:-1 gene:SORBI_3001G012000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGGTGCACGTCATCGTAGAAGGCGGCAGCAGCAGCTCGCCTCAGCATCAGCAT
CAGCAATGGCGGCTCACGCTCGTCCTGGCAGTTGTCGTCCCTCTGGTCTTCCTCATCCTC
CTCGCAAGAACAAGAACACGAAGAAGAGCAAAGAGCGGGAGCAGCACGGAGAAAGGGCGG
CGCCTCCTCCACCTGCCGCCGGGCCCTCCGACGCTGCCGATCCTGGGCAACCTGCACCAG
CTGGGCGCGCTGCCGCACCAGAGCCTACGCGAGCTGGCGCGCCGCCACGGGCCCGTCATG
CTGCTGCGCCTGGGCAGCGTGCCCACGCTGGTGGTGTCGTCGGCGGAGGCGGCGCGGGAG
GTGATGAAGACGCGCGACGCCGACTGCTGCAGCCGCCCCGACACGCCGGGGGCCCGGCGC
CTCTCGTACGGCCACAAGGACGTCGCCTTCTCGCCCTACGGCGACTACTGGCGCGACATG
CGCAAGCTCTTCGTCGTCGAGTTCCTCAGCGCGCGCCGCGTCCGGGCCGCCGACTACGCC
AGGGAGGCCGAGGTTGACAAGCTGATCGGCAGGTTGAGCTTGAGCAGCAGCGCCGGCGGC
AGGCCCGTGCGGCTGGAGGACCACATCTTCAGGCTCATGGACGGCGTCATCGGCACGGTG
GCGTTCGGGAACATCTACGGCACGGAGCAGTTCGCGCACAAGAAGCACTTCCACGACGTG
CTGGACGAGGCCATGAGCGCCAAGGCCGGCTTCTCCGCCGAGGACTACTACCCGAACGCC
GCCGGCCGCCTCTTGGACCGCCTCACCGGCGCCGCCGCCCGCCGCGAGAGGGTGTTCAGG
GACCTCGACGCCTTCTTCGACACCATCATCGACCAGCACCTGGTGAACCCGCCGCCCTCA
CGCGCCACGACGCCCGGCGGCGCCGGCCACGGCCCCGACCTCATCGACGTCTTCGTCGAC
CTCATGGAGATGGAGGAGCGACAGGTCGACGGCTCTTTCCGCTTCACTAGAGACCACATC
AAAGGCCTTCTCTCGAACGTGTTCACTGCTAGCGTGGACACGAGCTCGGTGACCATGGTG
TGGGCGATGGCGGAGCTGATGCGAAGGCCGGCGATGCTGAGGAAGGCGCAGGAGGAGGTC
CGGTCCGTAGTGGGCGGCGGCGGCAGGGAGACGGAGAGGGTGCACCCCGACGACGTGGCG
AAGCTCAGGTACCTGAAGGCGGTGGTGAAGGAGACGCTGCGGCTGCACCCGGCGGCGCCG
CTGCTGCTGCCGAGGGAGACGCTGCGGCAAGTCAGCATCTGCGGGTACGACGTGCCGGCC
AAGACGCGGGTGCTGGTCAACGCGTGGGCCATCGGCAGGGACCCCCGCAGCTGGGGGGAC
AGGCCCGAGGAGTTTGACCCGGACAGGTTCAACGACGGCGGCGGCGTGGGCTTCAACGGC
ACGCACTTCGAGCTCGTCCCCTTCGGCGCCGGTCGCCGGATGTGCCCTGGCATGGGCATG
GGCGTGGCCACCGTGGAGTTCACGCTCGCCAACCTGCTCTACTGCTTCGACTGGGAGCTC
CCGGACGGGGTGGGGGTCGACGACGTGAGCATGCAAGAGGCCGGAGGGCTCTCCGTCCAC
AAGAAAACGCCGCTCCTGCTCGTCCCGACTAGATACAAATGTCGATCTCGAGATCAGAGT
CTCGTCAGTACTCAGTAG

Peptide Sequence

PEP ID

EER93094
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:1031520:1034071:-1 gene:SORBI_3001G012000 transcript:EER93094 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAVHVIVEGGSSSSPQHQHQQWRLTLVLAVVVPLVFLILLARTRTRRRAKSGSSTEKGR
RLLHLPPGPPTLPILGNLHQLGALPHQSLRELARRHGPVMLLRLGSVPTLVVSSAEAARE
VMKTRDADCCSRPDTPGARRLSYGHKDVAFSPYGDYWRDMRKLFVVEFLSARRVRAADYA
REAEVDKLIGRLSLSSSAGGRPVRLEDHIFRLMDGVIGTVAFGNIYGTEQFAHKKHFHDV
LDEAMSAKAGFSAEDYYPNAAGRLLDRLTGAAARRERVFRDLDAFFDTIIDQHLVNPPPS
RATTPGGAGHGPDLIDVFVDLMEMEERQVDGSFRFTRDHIKGLLSNVFTASVDTSSVTMV
WAMAELMRRPAMLRKAQEEVRSVVGGGGRETERVHPDDVAKLRYLKAVVKETLRLHPAAP
LLLPRETLRQVSICGYDVPAKTRVLVNAWAIGRDPRSWGDRPEEFDPDRFNDGGGVGFNG
THFELVPFGAGRRMCPGMGMGVATVEFTLANLLYCFDWELPDGVGVDDVSMQEAGGLSVH
KKTPLLLVPTRYKCRSRDQSLVSTQ

Transcript Sequence

Transcript ID

EER93094
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:1031520:1034071:-1 gene:SORBI_3001G012000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CATCAACCGATCGATCGGTCCTCCAAAATTTCCAACTGATGGCTGTCAGCGTAATTATAA
ACCTCTAATATAATAATGCAATGATGTCTGACAGAAACGCATGCAGCTAGCCATTGAATT
AGTACCAGAGACGTACGGTAGTGTCTTCTGTTCGTACTTAGCAGAACCCTATTTATAGCC
CCCATGGCGAATGGAGATGCCCAAGCCTCAGCAGCTCAGCTCAGCTCGCACCACAACCCT
TACCGTTAAGCAACAGCTAGCTAGCAATGGCGGCGGTGCACGTCATCGTAGAAGGCGGCA
GCAGCAGCTCGCCTCAGCATCAGCATCAGCAATGGCGGCTCACGCTCGTCCTGGCAGTTG
TCGTCCCTCTGGTCTTCCTCATCCTCCTCGCAAGAACAAGAACACGAAGAAGAGCAAAGA
GCGGGAGCAGCACGGAGAAAGGGCGGCGCCTCCTCCACCTGCCGCCGGGCCCTCCGACGC
TGCCGATCCTGGGCAACCTGCACCAGCTGGGCGCGCTGCCGCACCAGAGCCTACGCGAGC
TGGCGCGCCGCCACGGGCCCGTCATGCTGCTGCGCCTGGGCAGCGTGCCCACGCTGGTGG
TGTCGTCGGCGGAGGCGGCGCGGGAGGTGATGAAGACGCGCGACGCCGACTGCTGCAGCC
GCCCCGACACGCCGGGGGCCCGGCGCCTCTCGTACGGCCACAAGGACGTCGCCTTCTCGC
CCTACGGCGACTACTGGCGCGACATGCGCAAGCTCTTCGTCGTCGAGTTCCTCAGCGCGC
GCCGCGTCCGGGCCGCCGACTACGCCAGGGAGGCCGAGGTTGACAAGCTGATCGGCAGGT
TGAGCTTGAGCAGCAGCGCCGGCGGCAGGCCCGTGCGGCTGGAGGACCACATCTTCAGGC
TCATGGACGGCGTCATCGGCACGGTGGCGTTCGGGAACATCTACGGCACGGAGCAGTTCG
CGCACAAGAAGCACTTCCACGACGTGCTGGACGAGGCCATGAGCGCCAAGGCCGGCTTCT
CCGCCGAGGACTACTACCCGAACGCCGCCGGCCGCCTCTTGGACCGCCTCACCGGCGCCG
CCGCCCGCCGCGAGAGGGTGTTCAGGGACCTCGACGCCTTCTTCGACACCATCATCGACC
AGCACCTGGTGAACCCGCCGCCCTCACGCGCCACGACGCCCGGCGGCGCCGGCCACGGCC
CCGACCTCATCGACGTCTTCGTCGACCTCATGGAGATGGAGGAGCGACAGGTCGACGGCT
CTTTCCGCTTCACTAGAGACCACATCAAAGGCCTTCTCTCGAACGTGTTCACTGCTAGCG
TGGACACGAGCTCGGTGACCATGGTGTGGGCGATGGCGGAGCTGATGCGAAGGCCGGCGA
TGCTGAGGAAGGCGCAGGAGGAGGTCCGGTCCGTAGTGGGCGGCGGCGGCAGGGAGACGG
AGAGGGTGCACCCCGACGACGTGGCGAAGCTCAGGTACCTGAAGGCGGTGGTGAAGGAGA
CGCTGCGGCTGCACCCGGCGGCGCCGCTGCTGCTGCCGAGGGAGACGCTGCGGCAAGTCA
GCATCTGCGGGTACGACGTGCCGGCCAAGACGCGGGTGCTGGTCAACGCGTGGGCCATCG
GCAGGGACCCCCGCAGCTGGGGGGACAGGCCCGAGGAGTTTGACCCGGACAGGTTCAACG
ACGGCGGCGGCGTGGGCTTCAACGGCACGCACTTCGAGCTCGTCCCCTTCGGCGCCGGTC
GCCGGATGTGCCCTGGCATGGGCATGGGCGTGGCCACCGTGGAGTTCACGCTCGCCAACC
TGCTCTACTGCTTCGACTGGGAGCTCCCGGACGGGGTGGGGGTCGACGACGTGAGCATGC
AAGAGGCCGGAGGGCTCTCCGTCCACAAGAAAACGCCGCTCCTGCTCGTCCCGACTAGAT
ACAAATGTCGATCTCGAGATCAGAGTCTCGTCAGTACTCAGTAGTCGTGCCAGTGCTTAA
TTATAGTATTAGCTACTGCATGCATGATGATGAGTAGTGATGACCATTTTATTAATTAGC
AACCCTTGCATTATATATATTATTACAGCAGAAAAAACACTAGCTAGCCATAGCTAGCTC
TTAGACGAGATTTATATATACTAAGGGTCTGTTTAGATTTGAAATTTTTTGGCCTAAAGA
GAATTCTTTTTGTGGAATTAGAGCCTGAGAACTAAACGGGGTCAAAAAAAAAATTTGGGA
CAAAAAATTTGGGCTGCAACTGTGCACACACTCCAATGGAAGCTCACCAATGACAAGGAG
CATAGTATGTAGCGTTCATGAATTAAATTAAGCGAGGGTCACCTGTGTACAAGAGAGATA
TTGTAATACTGTAGCTGTAGATGGTATGGTACTGGGTAATTGTTTTGATATATGAAATAA
TAATGGTGTCATGCATACCTTATAACTTGGTTTCATTTAAAT