Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93080
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:819598:822380:-1 gene:SORBI_3001G008600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGAGGCACCTGCAGCGGCGACTGGGAACAGTAGTAACAATCATAAGATCAAGACG
GTGGTGGTGGTGGTGCAGGAGAACCGCTCCTTCGACCACATGCTGGGGTGGATGAAGACG
CTGAACCCGGACATCGACGGCGTGACGGGCGTCGAGACCAACCACGTGGACGCCTCCGAC
CCGACCTCCCGCGCCGTCCGCTTCAGCGACGGCGCCGAGTACGTGGACCCGGACCCGGGC
CACTCCATGCAGGCCATCTACGAGCAGGTGTACGGGACCCCCTTCGTCGACGCCGCCACA
ACGCCCATCACCCCGCCGGGCGTCCCGGCTGCGCCGCCCATGTCCGGCTTCGCGCAGCAG
GCGGAGAAGGAGAAGCCCGGCATGTCCGGCACCGTCATGAGCGGGTTCCGCCCCGACGCC
GTGCCCGTGTACCGCGAGCTGGTGAAGGAGTTCGCCGTGTGCGACCGGTGGTTCGCGTCG
AACCCGGCGTCGACGCAGCCCAACCGGCTGTTCGTGCACTCCGCCACCTCCCACGGGCTC
GTCAGCAACGACACCAAGGCGCTCGTGGCGGGGCTCCCGCAGCGGACCATCTTCGACGCG
CTCCACGACGAGGGCTTCTCCTTCGGCATCTACTACCAGTACCCGCCGTCGACGCTCTTC
TACCGGAACCTCCGGCAGCTCAAGTACGTCGGCAGCTTCCACGCCTTCGACCTCGACTTC
CGGCGACACTGCCGGGAGGGGAAGCTGCCCAACTACGTCGTCGTGGAGCAGCGCTACTTC
GACCTGGAGATCCTCCCGGGGAACGACGACCATCCGTCCCACGACGTCGCCGAGGGCCAG
CGGTTCATCAAGGAGGTGTACGAGGCGCTGCGGTCGGGGCCGCAGTGGGAGGAGACGCTC
CTCGTCGTCACCTACGACGAGCACGGCGGGTTCTACGACCACGTGCCCACGCCCGCCGGC
GCCGGCGTCGTGCCCAGCCCCGACGGCATCGTCAGCGCCTCGCCTTTCTTCTTCGGCTTC
GACCGCCTCGGCGTCCGCGTCCCGGCGCTGCTCGTGTCGCCGTGGATCGAGCCCGGGACC
GTGCTGCACGGGCCGTCGGGGCCATACCCGACGTCGGAGTTCGAGCACTCCTCCATCCCG
GCCACCGTCAAGAAGCTCTTCAACCTCAGGAGCTTCCTCACCAAGCGCGACGCCTGGGCC
GGCACCTTCGACTGCGTCCTCACGCGCGACACGCCGCGCACCGACTGCCCACGTACCCTG
CCTGAGCCGGTGAAGCTGCGGCGGACGGTGGCGGCGGAGCATGCCCCGCTGTCGGAGTTC
CAGGAGGAGCTGGTGCAGCTCGCCGCGGTGCTCAACGGCGACCACACCAAGGACTCGTAC
CCGCACAAGCTCGTGGAGGGCATGACGGTGGCGGAGGCAGCCAGGTACTGCGTCGACGCC
TTCAAGGCCTTCCGGGACGAGTGCGAAAAATGCAAGAAGCGCGGCGAGGACGGCTCCCAC
ATCCCCACGGTGAAGCCGTCGGCGTCGGGGAAGGACAAGGACAAGAGCAAGAGCAAGAGC
AAGAGCAGCTTCGTTTCCAAGGCGCTGCTGGCTTGCCTCCCCTGTGCCCGTCCCTCCTCA
TGA

Peptide Sequence

PEP ID

EER93080
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:819598:822380:-1 gene:SORBI_3001G008600 transcript:EER93080 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAEAPAAATGNSSNNHKIKTVVVVVQENRSFDHMLGWMKTLNPDIDGVTGVETNHVDASD
PTSRAVRFSDGAEYVDPDPGHSMQAIYEQVYGTPFVDAATTPITPPGVPAAPPMSGFAQQ
AEKEKPGMSGTVMSGFRPDAVPVYRELVKEFAVCDRWFASNPASTQPNRLFVHSATSHGL
VSNDTKALVAGLPQRTIFDALHDEGFSFGIYYQYPPSTLFYRNLRQLKYVGSFHAFDLDF
RRHCREGKLPNYVVVEQRYFDLEILPGNDDHPSHDVAEGQRFIKEVYEALRSGPQWEETL
LVVTYDEHGGFYDHVPTPAGAGVVPSPDGIVSASPFFFGFDRLGVRVPALLVSPWIEPGT
VLHGPSGPYPTSEFEHSSIPATVKKLFNLRSFLTKRDAWAGTFDCVLTRDTPRTDCPRTL
PEPVKLRRTVAAEHAPLSEFQEELVQLAAVLNGDHTKDSYPHKLVEGMTVAEAARYCVDA
FKAFRDECEKCKKRGEDGSHIPTVKPSASGKDKDKSKSKSKSSFVSKALLACLPCARPSS

Transcript Sequence

Transcript ID

EER93080
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:819598:822380:-1 gene:SORBI_3001G008600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGCAAAACGATGAAAATAAGGGATGCCTGAAACTGAAACCATCCTTTTGCCGAACGCCTA
AGCAAGTGAATGGTGGTTGGATCCGGTGGTTTCTCTGCTGCACGGAGCTGAAAAGGACAG
TGTACACAACTGATGGTGGATGGATCGGACGCCTAAGGTAAGCAGCTGCTGTGGATCCAT
CATCTGCTTGTTTGCTGTGATATCTATCTTTTATGGGGTTACCTTGGAGTGCCAAGCAAA
TCCTAAAGCAGCAGCCCAACAAATGGGGTCAACAATGGTCGGCGGCGGCCTCCGCATAGT
TCCACAAGCCAAAGAAATCTCTCTCTGTCTTGTTGTTTTTCAGAGGAATGGCGACGGCGA
CGGACGACAAGGACGCTTCTCTGTCGCTCGCGCCTTCCGGCGTCCATCTTCTCCGATGCG
TGTACGTCCATGCATTTGTGTGCATTACATTGTCCTACTAGCTTTCCTCCTCTATTGTCG
TTGTTGTCATGCCAAACCATGCGTGTGTGTGTGTGTGTCTGAAACTCTCAAGATAAGATG
CTTGGCAGACAAGCGTCCGAGCTGGGTGTGCCATCTTGCTTGTGTTCCTCTTTAGCTTCT
TTTTCTTCTAGCTCATGTGTAATGCTACGTCAACAACGACCTTCCTTCTCTCGTCTTCAG
TTTTTTCCTTGCACGTTGGACTAACTCTCCTGCTAGCTACCACATATATATTGTGCATTG
TCCACCGATCTATATCCGCATCGATCCATCCACCGAGAAGGAAGCTAAGGAAGAAACCAA
TCAAGCAACAAGCACTTGTGTTGTAGAGAAGAAGCGAGCAACAATGGCGGAGGCACCTGC
AGCGGCGACTGGGAACAGTAGTAACAATCATAAGATCAAGACGGTGGTGGTGGTGGTGCA
GGAGAACCGCTCCTTCGACCACATGCTGGGGTGGATGAAGACGCTGAACCCGGACATCGA
CGGCGTGACGGGCGTCGAGACCAACCACGTGGACGCCTCCGACCCGACCTCCCGCGCCGT
CCGCTTCAGCGACGGCGCCGAGTACGTGGACCCGGACCCGGGCCACTCCATGCAGGCCAT
CTACGAGCAGGTGTACGGGACCCCCTTCGTCGACGCCGCCACAACGCCCATCACCCCGCC
GGGCGTCCCGGCTGCGCCGCCCATGTCCGGCTTCGCGCAGCAGGCGGAGAAGGAGAAGCC
CGGCATGTCCGGCACCGTCATGAGCGGGTTCCGCCCCGACGCCGTGCCCGTGTACCGCGA
GCTGGTGAAGGAGTTCGCCGTGTGCGACCGGTGGTTCGCGTCGAACCCGGCGTCGACGCA
GCCCAACCGGCTGTTCGTGCACTCCGCCACCTCCCACGGGCTCGTCAGCAACGACACCAA
GGCGCTCGTGGCGGGGCTCCCGCAGCGGACCATCTTCGACGCGCTCCACGACGAGGGCTT
CTCCTTCGGCATCTACTACCAGTACCCGCCGTCGACGCTCTTCTACCGGAACCTCCGGCA
GCTCAAGTACGTCGGCAGCTTCCACGCCTTCGACCTCGACTTCCGGCGACACTGCCGGGA
GGGGAAGCTGCCCAACTACGTCGTCGTGGAGCAGCGCTACTTCGACCTGGAGATCCTCCC
GGGGAACGACGACCATCCGTCCCACGACGTCGCCGAGGGCCAGCGGTTCATCAAGGAGGT
GTACGAGGCGCTGCGGTCGGGGCCGCAGTGGGAGGAGACGCTCCTCGTCGTCACCTACGA
CGAGCACGGCGGGTTCTACGACCACGTGCCCACGCCCGCCGGCGCCGGCGTCGTGCCCAG
CCCCGACGGCATCGTCAGCGCCTCGCCTTTCTTCTTCGGCTTCGACCGCCTCGGCGTCCG
CGTCCCGGCGCTGCTCGTGTCGCCGTGGATCGAGCCCGGGACCGTGCTGCACGGGCCGTC
GGGGCCATACCCGACGTCGGAGTTCGAGCACTCCTCCATCCCGGCCACCGTCAAGAAGCT
CTTCAACCTCAGGAGCTTCCTCACCAAGCGCGACGCCTGGGCCGGCACCTTCGACTGCGT
CCTCACGCGCGACACGCCGCGCACCGACTGCCCACGTACCCTGCCTGAGCCGGTGAAGCT
GCGGCGGACGGTGGCGGCGGAGCATGCCCCGCTGTCGGAGTTCCAGGAGGAGCTGGTGCA
GCTCGCCGCGGTGCTCAACGGCGACCACACCAAGGACTCGTACCCGCACAAGCTCGTGGA
GGGCATGACGGTGGCGGAGGCAGCCAGGTACTGCGTCGACGCCTTCAAGGCCTTCCGGGA
CGAGTGCGAAAAATGCAAGAAGCGCGGCGAGGACGGCTCCCACATCCCCACGGTGAAGCC
GTCGGCGTCGGGGAAGGACAAGGACAAGAGCAAGAGCAAGAGCAAGAGCAGCTTCGTTTC
CAAGGCGCTGCTGGCTTGCCTCCCCTGTGCCCGTCCCTCCTCATGACCTCTCTCATGGCT
GATGACTGATGATGCGTAAGGGGTTCCTGTGTTGTTCTTGCGGTTGCAGGGGAATAGGGA
AGGAGCAATCTACAGTACAGCATAGCCTGATTGATAAAGTTCGAATGCTTCTGAATTTTA
CAATGTGATACCTAAGTTGTGTAGATTGAATTGTGGTTATATGATTTGTACTCCCTTTTA
TTGATGAATATTCTGATGCACGGTCAATTGAGTGGATATGAAAAGAGAAACATGACATTT
TATTGTTCACCTAAACAGCCATTTAGCCCACTTGTAAACGCTACAAAGCGGTATTGCCAT
TTCCGTTTAATTGACTGTATCTT