Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER93047
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:11180:14899:-1 gene:SORBI_3001G000200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAGAAATGGGGCAACAGCGGGCAAGCCGCCGATTCCTTCTACCAGGTCCGCCCCGAT
TGCAGCCAAAACGTCCCCAACACCAAGTTCAAGATCAAGGCGGGGAAGACACTGAGCGTT
CGGAAATGGCATGCTGCCTTCACGCGTGACGGATGCCTGGATATCGCCTCTGTTCTCAGC
CGCATACAGAGAGGGGGTGTGCACCCCGCAATCAGGGGAGAGGTTTGGGAGTTCTTGCTC
GGCTGCTTTGACCCTGGCAGCACCTTCGATGAGAGGGACCAGATTAGGGAGCGGAGAAGG
ATGCAGTATGCCAGATGGAAGGAAGAATGCAAAGAAATGGATTCTCATGTTGGCAGTGGT
AAAATTATCACTGCCCCGGTTATAACTGAGGATGGATTCCCTATCAAGGATCCATTGGTA
TTACTGGAGGCTACTTCAGACACGCAAGGTACTTCTACCACCACCACCACCAATGGCAGC
AGTGGAAATGGAATTGATGTTGATAACAACTCCATGAACCTTGTCTTGGATAAACAAATC
ATTGGCTGGAAGCTTACATTACATCAAATAGGCCTTGATGTTCTGCGCACTGACCGCACC
ATGGTATTTTACGAGAACAAAGATAATCTTTCAAAGTTGTGGGATATTCTTGCTGTCTAT
GCATGGATCGACAAAGAAGTTGGTTATTGTCAAGGGATGAGTGATTTATGTTCACCCATG
ATAGTGCTACTCAACGATGAAGCAGATGCATTTTGGTGCTTTGAGAGATTGATGCGTAGG
CTGCGAGGCAATTTCAGATGTACACAGCAGTCAGTTGGGGTGGAAAACCAGCTTCAGCAT
CTTGCTTCTATCATTCAGGTGCTTGATCCAAAGTTGCATGGCCACCTAGAAACACTTGGC
GGGGGTGACTATCTCTTTGCATTCCGCATGTTCATGGTATTGTTCCGGCGAGAACTATCA
TTTGGGGATTCCTTGTACCTTTGGGAGATGATGTGGGCTCTAGAATATGATCCTGACATT
TGCTCCACTTATGAAGAGACTGGGGCTGCAGTCCACAAAATTGAAGGATTTAAACCAAAG
GTAAAATCAATACGTCAGTTTGGCAAGTACGAGAGGGAGAATATGAAGAACAGGGCAAAT
GGTGGCGATGGACCTGTCCCTATTTCGGTTTTCCTGGTTGCTAGTGTCCTGAAAGAGAAC
AGTCCAAAGCTTCTGCAAGAGGCTCGAGGGATTGATGACATTATTAGGATATTGAATGAT
GTTAACGGGAATCTGGACGCGAAAAGGGCTTGTGTTGTTGCACTGAAGCTTCATAGGAAG
TACCACAAAAAGTTGCAGGAAAAGAAATCCTAA

Peptide Sequence

PEP ID

EER93047
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:11180:14899:-1 gene:SORBI_3001G000200 transcript:EER93047 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKKWGNSGQAADSFYQVRPDCSQNVPNTKFKIKAGKTLSVRKWHAAFTRDGCLDIASVLS
RIQRGGVHPAIRGEVWEFLLGCFDPGSTFDERDQIRERRRMQYARWKEECKEMDSHVGSG
KIITAPVITEDGFPIKDPLVLLEATSDTQGTSTTTTTNGSSGNGIDVDNNSMNLVLDKQI
IGWKLTLHQIGLDVLRTDRTMVFYENKDNLSKLWDILAVYAWIDKEVGYCQGMSDLCSPM
IVLLNDEADAFWCFERLMRRLRGNFRCTQQSVGVENQLQHLASIIQVLDPKLHGHLETLG
GGDYLFAFRMFMVLFRRELSFGDSLYLWEMMWALEYDPDICSTYEETGAAVHKIEGFKPK
VKSIRQFGKYERENMKNRANGGDGPVPISVFLVASVLKENSPKLLQEARGIDDIIRILND
VNGNLDAKRACVVALKLHRKYHKKLQEKKS

Transcript Sequence

Transcript ID

EER93047
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:11180:14899:-1 gene:SORBI_3001G000200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCACAGCGCAGCGCCCGCTAGCTGTAGCTGTAGCCTCTGCGGTTGGAGCTGACCCGCCCA
ACCTAACAACCGCTCGGTGGCATCTTCCTCCCGGGATCCCGGTTCCTCCCTCCCTATCTC
CCTCGATCCAGCTCAGCTCAGCTCTCTTCCTCCCGCCCCCCCGTACGACCTTACTCTTCT
TGATCCGTTCATTCATACATACTTGTTGAGAGGAAGAGGATCGGTCTGCTGCTACTAGCT
GCGGATAGTTGTGGTTCTAGTAGCAGGTAAAAGAAGGCAAGGGAAGGGAAGGGAATCCAT
GAAGAAATGGGGCAACAGCGGGCAAGCCGCCGATTCCTTCTACCAGGTCCGCCCCGATTG
CAGCCAAAACGTCCCCAACACCAAGTTCAAGATCAAGGCGGGGAAGACACTGAGCGTTCG
GAAATGGCATGCTGCCTTCACGCGTGACGGATGCCTGGATATCGCCTCTGTTCTCAGCCG
CATACAGAGAGGGGGTGTGCACCCCGCAATCAGGGGAGAGGTTTGGGAGTTCTTGCTCGG
CTGCTTTGACCCTGGCAGCACCTTCGATGAGAGGGACCAGATTAGGGAGCGGAGAAGGAT
GCAGTATGCCAGATGGAAGGAAGAATGCAAAGAAATGGATTCTCATGTTGGCAGTGGTAA
AATTATCACTGCCCCGGTTATAACTGAGGATGGATTCCCTATCAAGGATCCATTGGTATT
ACTGGAGGCTACTTCAGACACGCAAGGTACTTCTACCACCACCACCACCAATGGCAGCAG
TGGAAATGGAATTGATGTTGATAACAACTCCATGAACCTTGTCTTGGATAAACAAATCAT
TGGCTGGAAGCTTACATTACATCAAATAGGCCTTGATGTTCTGCGCACTGACCGCACCAT
GGTATTTTACGAGAACAAAGATAATCTTTCAAAGTTGTGGGATATTCTTGCTGTCTATGC
ATGGATCGACAAAGAAGTTGGTTATTGTCAAGGGATGAGTGATTTATGTTCACCCATGAT
AGTGCTACTCAACGATGAAGCAGATGCATTTTGGTGCTTTGAGAGATTGATGCGTAGGCT
GCGAGGCAATTTCAGATGTACACAGCAGTCAGTTGGGGTGGAAAACCAGCTTCAGCATCT
TGCTTCTATCATTCAGGTGCTTGATCCAAAGTTGCATGGCCACCTAGAAACACTTGGCGG
GGGTGACTATCTCTTTGCATTCCGCATGTTCATGGTATTGTTCCGGCGAGAACTATCATT
TGGGGATTCCTTGTACCTTTGGGAGATGATGTGGGCTCTAGAATATGATCCTGACATTTG
CTCCACTTATGAAGAGACTGGGGCTGCAGTCCACAAAATTGAAGGATTTAAACCAAAGGT
AAAATCAATACGTCAGTTTGGCAAGTACGAGAGGGAGAATATGAAGAACAGGGCAAATGG
TGGCGATGGACCTGTCCCTATTTCGGTTTTCCTGGTTGCTAGTGTCCTGAAAGAGAACAG
TCCAAAGCTTCTGCAAGAGGCTCGAGGGATTGATGACATTATTAGGATATTGAATGATGT
TAACGGGAATCTGGACGCGAAAAGGGCTTGTGTTGTTGCACTGAAGCTTCATAGGAAGTA
CCACAAAAAGTTGCAGGAAAAGAAATCCTAACATCATATGGCGAGATACCGAGATTGCAC
GCAACACAGGGTTGCAAAGATCCTAACATCATATGGCGAGATACGTACCGAGATTGCACG
CCAATATTCGCCATACTGGGTTGCAAAGAGCAGCAGCATATCTAGAGATTTTAGGGTAAT
TGTTGGCATGAGTATTACCCCATGTTTTTGTTCCTTCCACTTAGAGCATGTCTAAGAGTC
TTTTCAAATTTCACACTTTGAATCATCATTTGGAAAATCATCTGTATAAAATTGTTTTCT
ATATATTTTCACTCTCTAACAACTTTTTAATATATTGTGTATACTCTAGAGAGCTATTTT
TG