Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER92944
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:78734094:78739454:1 gene:SORBI_3001G522400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCCGGACCCGTGCGCCGACCTCGCGGTGACGCCCAAGACGGCCGCCAAGGACGAG
GCGTCCTGCTCCATGGCCACGCCGCCCAAGGTCACTCCCGACGAGGTGCGCGCGGTAGCG
CAAAAGTTCGCGAACCAGCCTATCCAGGAGACGGAGCCCGGCGTCTGGGCCGTCCTCACC
GCCATCTCCAAGAAGGCCCGCCTCCGGCCCCAGGGAATGAACATTCTTTTGAGTGCTGAT
GAGCACTGCCTAGGACGCACTGTTGAGGAGCGGTTTCAGATTTTTGCCCAGCAGATCAGT
GGGAAGCATTGCAAGATATACAAGGACACCGTCTTAGGGGAGCTAAACCGCCACGAGCCT
GTGCCTGTTTACCTCAAGGACACCAGCTCAAATGGCACATTCATTAACTGGACAAGGCTC
AAGAAAAATTCATCCCCTGTCAAGCTTAATCATGGCGACATTATATCATTATCATCACCT
CCTCATGACAACAAATCCTTTGTATTTGTCTACCGCGAAGTTAATGCAATCAGTTGTGTA
GAGATTGGGGCTCCCATTCTTAAAAGGAAGTCAGAAGAGGGTGGTTCTGGAAGCAAGAGG
CTAAAGGGTCTTGGTATTGGTTCTCCTGATGGTCCTGTTTCACTAGACGATGTCCGAAGA
CTAGAAAAATCTAATGCTGATCTCAGGGAACAACTTGAGGCACATGTTGTGACAATTGAG
ACTTTGAGGGCTGAAATAAAAACGGCCCAAGTGCAGCATGGAAAGGAACTTGAGGAGTTG
AGAGAAACTACGTCTAGTTCTTATCTTGATCAAACTAAATCTCTTCGGTCAGCACTTGAG
GAGAAACAGAAGCAAATAGATTCACTCAGTACATCAAATACAGAGTTACAGAAGTCTGTA
AAAGATCTGGATGAAAGGCTTAGTGCATCTAAACAATCACGCGATGATGCTGATGAGATA
ATTTCAAGCCAGAAAGCAATCATATGTGAGCTTGAAGGACAGCTTAGTGAGGAACGAAAC
TTAAGAAGGGAAGAGCGTGATAAGGCTGCACATGACTTGAAATCTGCATTGCACAAAGTG
CAAGCCGAGGCTCAAGAAGAAATTAAGAAACAGGCAGAGTCTTACCTTAGACAACAAAGG
GAACAGAAAGAAGTTATTAGCAAGCTTCAGGAATCGGAAAAAGAAACCCGTTTGCTTGTG
GAAATTTTGAGGTCCAAGCTGGAAGATGCTCGAGATAATCTTGTAACATCCGAGAAAAAA
ACAAGAGAGCTGGAAGCTCAACTTCAGGACGAGCAGCTAGTATCAGCCAACAATCGAAAG
AAATCAGAAAATCTGGAAACTGAATTGAGAAAACTGAAGAAGGAACTTGAGAATGAGAAG
GCTGCTCGAGAAGAAGCATGGGCAAAGGTCTCAGCACTTGAGCTTGAAATAGCTGCAACG
CTTAGAGATCTATCAATTGAGAAACAGAGGTACCAAGGAGCTAGAGAACGGATTATTCTA
CGGGAGACTCAGCTGCGTGCTTTCTATTCAACTACAGAAGAAATCTCTTCTCTGTTTGCG
AAACAGCAGGAACAGCTGAAAGCTATGCAGAGAACTTTGGAGGATGAAGAGAACTATGAG
AGCACCTTAATGAGTGTGGATCTCACTAAAGTGCCTCTAGACACCGTAGCCACTGATAAT
GCTGGTATGAAGCCAGTAGGCTGCTCAAAAAATACAGTAGGAGCTTCAAGTGCTTCACCA
GAAAATACCCAGGTAAGTGAACATAGTTCCAGTGACGAAGATGCCAACATGACTGAGCAG
CATGATGATGATGGTACTGCCGATGGTGGCAGCACTCAAGGTCTAGAATGCACCAGTCCA
GAAAGGTCAGAGGAGAGATTAAGGCCGGGTTTTCATGGCAATCCTGTTTCTACAGCTCCT
GAGAGGGAGGTAACAGACACTGAGCAAGTTCCTGAGACGGAAAGCCAAGCTGGTAATGTT
GGTTGTGATGACCAAAGATGTGACAATATGGGAGGAGAGACTATGCCACTAGAGGACGAA
GTGCAGCTTCCAGAGAAGGACGAACCTACTGCATTACTCAAAGATGCAGTGCAGCCACAA
GCAAATGTGGTTCGTATTCCAATTCCCGATGGTGGCACTGGCCACTGTTCTGAAGAAAAA
CATGAGGGTGCTTGCTCTGAGAGCAAACGGGAGGACACACATGTTGGAGCTATCAGAACG
GCTGATCTGTTGGCCTCAGAAGTTGCTGGGAGTTGGGCAGTGGAAACAGGGCCATCTGTC
CATGGGGAGAACGAATCTCCAAGGAGCTTGGGAGATGCTGCCGATGCTACAGAGCAAGAC
GAAGATGGAGGTAGCGAGGCAGCTGATGCTTTGTTAACTTTGGTGAATTCAGAGGGCCAG
GCGGCTGGGAGCCAGAATAATGTTGAGCATGCCAGTTCCAAAATAACCAATGATCATCGT
GTTCTTAGTGCCATGATTGGAATTGTTGATCCTGAATTCAGGAAGCAAATGTCCAGAAGT
GGAGTTGGAAATGAGGAACCGATGTCCGACGCTGAGACGGATGAAGGCGTTGAGGAAGGT
GATTCTGATTCAGATACAGGTTCAGATGGCAGTGACAGCGAGGAGGCTATGGTTGAGGAT
TCTGTTGGGTAG

Peptide Sequence

PEP ID

EER92944
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:78734094:78739454:1 gene:SORBI_3001G522400 transcript:EER92944 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAPDPCADLAVTPKTAAKDEASCSMATPPKVTPDEVRAVAQKFANQPIQETEPGVWAVLT
AISKKARLRPQGMNILLSADEHCLGRTVEERFQIFAQQISGKHCKIYKDTVLGELNRHEP
VPVYLKDTSSNGTFINWTRLKKNSSPVKLNHGDIISLSSPPHDNKSFVFVYREVNAISCV
EIGAPILKRKSEEGGSGSKRLKGLGIGSPDGPVSLDDVRRLEKSNADLREQLEAHVVTIE
TLRAEIKTAQVQHGKELEELRETTSSSYLDQTKSLRSALEEKQKQIDSLSTSNTELQKSV
KDLDERLSASKQSRDDADEIISSQKAIICELEGQLSEERNLRREERDKAAHDLKSALHKV
QAEAQEEIKKQAESYLRQQREQKEVISKLQESEKETRLLVEILRSKLEDARDNLVTSEKK
TRELEAQLQDEQLVSANNRKKSENLETELRKLKKELENEKAAREEAWAKVSALELEIAAT
LRDLSIEKQRYQGARERIILRETQLRAFYSTTEEISSLFAKQQEQLKAMQRTLEDEENYE
STLMSVDLTKVPLDTVATDNAGMKPVGCSKNTVGASSASPENTQVSEHSSSDEDANMTEQ
HDDDGTADGGSTQGLECTSPERSEERLRPGFHGNPVSTAPEREVTDTEQVPETESQAGNV
GCDDQRCDNMGGETMPLEDEVQLPEKDEPTALLKDAVQPQANVVRIPIPDGGTGHCSEEK
HEGACSESKREDTHVGAIRTADLLASEVAGSWAVETGPSVHGENESPRSLGDAADATEQD
EDGGSEAADALLTLVNSEGQAAGSQNNVEHASSKITNDHRVLSAMIGIVDPEFRKQMSRS
GVGNEEPMSDAETDEGVEEGDSDSDTGSDGSDSEEAMVEDSVG

Transcript Sequence

Transcript ID

EER92944
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:78734094:78739454:1 gene:SORBI_3001G522400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACGAACTCCACAGCCCGCGCGCACTCACAGGAGAGGAGACAGGACTCGGTGCGCGCCGTC
CCCGTGCGTGAGCGTGGCGCCGTCCACCAAACGCTTCCACCACCCGCCAGTTTCCCTTCC
GTCCGCTTCCCGCTCGGCCGTTCCTCCTCCCCGCCACGGCGCGCGCCCCGGCAGCGGGAG
GCGGGGCACTCTGCGCTCGCGCGATGGCGCCGGACCCGTGCGCCGACCTCGCGGTGACGC
CCAAGACGGCCGCCAAGGACGAGGCGTCCTGCTCCATGGCCACGCCGCCCAAGGTCACTC
CCGACGAGGTGCGCGCGGTAGCGCAAAAGTTCGCGAACCAGCCTATCCAGGAGACGGAGC
CCGGCGTCTGGGCCGTCCTCACCGCCATCTCCAAGAAGGCCCGCCTCCGGCCCCAGGGAA
TGAACATTCTTTTGAGTGCTGATGAGCACTGCCTAGGACGCACTGTTGAGGAGCGGTTTC
AGATTTTTGCCCAGCAGATCAGTGGGAAGCATTGCAAGATATACAAGGACACCGTCTTAG
GGGAGCTAAACCGCCACGAGCCTGTGCCTGTTTACCTCAAGGACACCAGCTCAAATGGCA
CATTCATTAACTGGACAAGGCTCAAGAAAAATTCATCCCCTGTCAAGCTTAATCATGGCG
ACATTATATCATTATCATCACCTCCTCATGACAACAAATCCTTTGTATTTGTCTACCGCG
AAGTTAATGCAATCAGTTGTGTAGAGATTGGGGCTCCCATTCTTAAAAGGAAGTCAGAAG
AGGGTGGTTCTGGAAGCAAGAGGCTAAAGGGTCTTGGTATTGGTTCTCCTGATGGTCCTG
TTTCACTAGACGATGTCCGAAGACTAGAAAAATCTAATGCTGATCTCAGGGAACAACTTG
AGGCACATGTTGTGACAATTGAGACTTTGAGGGCTGAAATAAAAACGGCCCAAGTGCAGC
ATGGAAAGGAACTTGAGGAGTTGAGAGAAACTACGTCTAGTTCTTATCTTGATCAAACTA
AATCTCTTCGGTCAGCACTTGAGGAGAAACAGAAGCAAATAGATTCACTCAGTACATCAA
ATACAGAGTTACAGAAGTCTGTAAAAGATCTGGATGAAAGGCTTAGTGCATCTAAACAAT
CACGCGATGATGCTGATGAGATAATTTCAAGCCAGAAAGCAATCATATGTGAGCTTGAAG
GACAGCTTAGTGAGGAACGAAACTTAAGAAGGGAAGAGCGTGATAAGGCTGCACATGACT
TGAAATCTGCATTGCACAAAGTGCAAGCCGAGGCTCAAGAAGAAATTAAGAAACAGGCAG
AGTCTTACCTTAGACAACAAAGGGAACAGAAAGAAGTTATTAGCAAGCTTCAGGAATCGG
AAAAAGAAACCCGTTTGCTTGTGGAAATTTTGAGGTCCAAGCTGGAAGATGCTCGAGATA
ATCTTGTAACATCCGAGAAAAAAACAAGAGAGCTGGAAGCTCAACTTCAGGACGAGCAGC
TAGTATCAGCCAACAATCGAAAGAAATCAGAAAATCTGGAAACTGAATTGAGAAAACTGA
AGAAGGAACTTGAGAATGAGAAGGCTGCTCGAGAAGAAGCATGGGCAAAGGTCTCAGCAC
TTGAGCTTGAAATAGCTGCAACGCTTAGAGATCTATCAATTGAGAAACAGAGGTACCAAG
GAGCTAGAGAACGGATTATTCTACGGGAGACTCAGCTGCGTGCTTTCTATTCAACTACAG
AAGAAATCTCTTCTCTGTTTGCGAAACAGCAGGAACAGCTGAAAGCTATGCAGAGAACTT
TGGAGGATGAAGAGAACTATGAGAGCACCTTAATGAGTGTGGATCTCACTAAAGTGCCTC
TAGACACCGTAGCCACTGATAATGCTGGTATGAAGCCAGTAGGCTGCTCAAAAAATACAG
TAGGAGCTTCAAGTGCTTCACCAGAAAATACCCAGGTAAGTGAACATAGTTCCAGTGACG
AAGATGCCAACATGACTGAGCAGCATGATGATGATGGTACTGCCGATGGTGGCAGCACTC
AAGGTCTAGAATGCACCAGTCCAGAAAGGTCAGAGGAGAGATTAAGGCCGGGTTTTCATG
GCAATCCTGTTTCTACAGCTCCTGAGAGGGAGGTAACAGACACTGAGCAAGTTCCTGAGA
CGGAAAGCCAAGCTGGTAATGTTGGTTGTGATGACCAAAGATGTGACAATATGGGAGGAG
AGACTATGCCACTAGAGGACGAAGTGCAGCTTCCAGAGAAGGACGAACCTACTGCATTAC
TCAAAGATGCAGTGCAGCCACAAGCAAATGTGGTTCGTATTCCAATTCCCGATGGTGGCA
CTGGCCACTGTTCTGAAGAAAAACATGAGGGTGCTTGCTCTGAGAGCAAACGGGAGGACA
CACATGTTGGAGCTATCAGAACGGCTGATCTGTTGGCCTCAGAAGTTGCTGGGAGTTGGG
CAGTGGAAACAGGGCCATCTGTCCATGGGGAGAACGAATCTCCAAGGAGCTTGGGAGATG
CTGCCGATGCTACAGAGCAAGACGAAGATGGAGGTAGCGAGGCAGCTGATGCTTTGTTAA
CTTTGGTGAATTCAGAGGGCCAGGCGGCTGGGAGCCAGAATAATGTTGAGCATGCCAGTT
CCAAAATAACCAATGATCATCGTGTTCTTAGTGCCATGATTGGAATTGTTGATCCTGAAT
TCAGGAAGCAAATGTCCAGAAGTGGAGTTGGAAATGAGGAACCGATGTCCGACGCTGAGA
CGGATGAAGGCGTTGAGGAAGGTGATTCTGATTCAGATACAGGTTCAGATGGCAGTGACA
GCGAGGAGGCTATGGTTGAGGATTCTGTTGGGTAGCTTAAACGGAACTGACTGTTCATTG
TAAATGTCTCAATTCGTTTGTGTACCTTTCGTTGTATGAGCTTGTATTATGCGTAGCATA
AGCCCCTCGTGCATTTGTTTTTTTATTCGTTATTAAGTGTCTTCAGCAGCTCTTGGTGTT
GTACGAAATCGAGACCTTTTGGTCTTCAACACACAAATAAAGATATTTACTTGCTCCGTT
CCAAATT