Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER92919
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:78373181:78377727:1 gene:SORBI_3001G517500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGCGGAGGGGACGGGGACGCCGACGCCGGCGGCGAGCCCGCGGCCGCGCAGGCCACG
CTGCACATCCGGTGCACCAACGGCTCCAAGTTCGCCGTGCGGGCCGACCTGGGCACCACC
GTCGGGGCGTTCAAGGCGATCGTCGCCGAGAGCTGCGACGTGCCGGCGCCGCAGCAGCGG
CTGATCTACAAGGGTCGGATCTTGAAGGACGACCAAACCCTAGCCAGCTACGGTGTGGAG
ACAGACCATACAATCCACATGGTACGTGGTGCTGCGCCACCACCAGCATCTACTGCACCT
GCAGCCAACCAAGAACCTACCACTGCTGCTCCTGCCAGTTCCCCGGCAGCAGGATTGGGT
GGCTTGTTACAAAGTCTGGGTGCTACAGGGGCTGCTGCTAACAGTGGGGGGTCAGGTTTG
TTTGGATCTGGCCTCCCTGAGTTAGACCAGATGCAACAACAGCTAGCGGAAAATCCGAAC
TTGATGAGGGAAATAATGAATATGCCACTTATGCAGAATTTGATGAACAGTCCTGAACTC
ATACGCAGTATAATAATGAACAATCCTCAAATGCGTGAGCTTATTGATCGCAATCCAGAT
CTTGCTCATGTCCTCAATGATCCAAGCATCATGCGCCAGACTTTTGAAGCAGTTCGGAAT
CCTGAACTCATGAGGGAGATGATGCGGAACACAGACAGAGCCATGAGCAACATTGAATCT
TCTCCAGAAGGATTCAACATGCTCCGTCGCATGTATGAAACTGTCCAAGAGCCTTTTCTG
AATGCAACAACAATGGGTAGCGAGGGTGATCGAAACTCGAATCCATTTGCTGCTCTTCTA
GGAAACCAGGGGTCTAACCAAGCAAGAGACTCAGCTGCAAATGGAACAACTACAGCTTCA
GACCCCACTTCAGGCTCTCCAGCTCCAAATACTAATCCACTTCCAAATCCTTGGGGCCCA
AATGCTGGCTCTACCCAAGGAGCAGCAAGGTCCCCTCCTGCTAGCAACACTAGGAGTACC
ACAGCAAGTGGCCTAGGAGGGTTGGGTTCAGCAGATTTGGGAAGTATGCTTGGTGCCAGT
GGTGGTGGCTCTGATGCTACCTTCTTGACTCAAGTTTTGCAAAACCCAACTATGATGCAG
ATGATGCAAAACATTATGTCTAATCCTCAGTCCATGAATCAGCTGCTTAATATGAATCCA
AATGTACGTAACATGATGGAATCCAATACTCAAATGAGAGAAATGATTCAGAATCCAGAA
TTTCTTCGCCAGTTGACGTCTCCTGAAACATTGCAGCAATTAATTTCATTCCAGCAGTCT
TTGATGTCACAACTTGGCCAACAACAAGCTGGACAGGAGCGGACACAATCAGGCTCTGGT
GCAGGCAATGTCAACCTCAACACCTTGATGAACATGTTCAGCGGGCTTGGTGCTGGTGGT
GGCCTAGGTGTTCCAAATGCTCCTAATGTGCCGCCAGAAGAACTGTATGCAACACAATTA
GCTCAGCTCCAAGAAATGGGTTTCTTTGACACACAGGAGAACATCCGAGCCTTGGCCGCT
ACCGCTGGAAATGTTCATGCTGCAGTGGAGCGACTTCTTGGAAATATGGGCCAATAG

Peptide Sequence

PEP ID

EER92919
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:78373181:78377727:1 gene:SORBI_3001G517500 transcript:EER92919 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGGGDGDADAGGEPAAAQATLHIRCTNGSKFAVRADLGTTVGAFKAIVAESCDVPAPQQR
LIYKGRILKDDQTLASYGVETDHTIHMVRGAAPPPASTAPAANQEPTTAAPASSPAAGLG
GLLQSLGATGAAANSGGSGLFGSGLPELDQMQQQLAENPNLMREIMNMPLMQNLMNSPEL
IRSIIMNNPQMRELIDRNPDLAHVLNDPSIMRQTFEAVRNPELMREMMRNTDRAMSNIES
SPEGFNMLRRMYETVQEPFLNATTMGSEGDRNSNPFAALLGNQGSNQARDSAANGTTTAS
DPTSGSPAPNTNPLPNPWGPNAGSTQGAARSPPASNTRSTTASGLGGLGSADLGSMLGAS
GGGSDATFLTQVLQNPTMMQMMQNIMSNPQSMNQLLNMNPNVRNMMESNTQMREMIQNPE
FLRQLTSPETLQQLISFQQSLMSQLGQQQAGQERTQSGSGAGNVNLNTLMNMFSGLGAGG
GLGVPNAPNVPPEELYATQLAQLQEMGFFDTQENIRALAATAGNVHAAVERLLGNMGQ

Transcript Sequence

Transcript ID

EER92919
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:78373181:78377727:1 gene:SORBI_3001G517500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCTTCTTCCTCCTCGCACACGCCAGGCACGAGACCAACACCCCCAGCGCACGCACTCCAA
ATAGCGAGCCGAAGAGGGGCCGAGGCTACGAGTCCTCCACCTCTCCTCCGCCGCGTCGCT
CGCGCTCCACGCACGCGCCGAGAGCCGAATCGGAGCCGTGAGGCAGCCGCCCCCGGCGGA
TCGACCTTAGGGCCAGGGCATGGGCGGAGGGGACGGGGACGCCGACGCCGGCGGCGAGCC
CGCGGCCGCGCAGGCCACGCTGCACATCCGGTGCACCAACGGCTCCAAGTTCGCCGTGCG
GGCCGACCTGGGCACCACCGTCGGGGCGTTCAAGGCGATCGTCGCCGAGAGCTGCGACGT
GCCGGCGCCGCAGCAGCGGCTGATCTACAAGGGTCGGATCTTGAAGGACGACCAAACCCT
AGCCAGCTACGGTGTGGAGACAGACCATACAATCCACATGGTACGTGGTGCTGCGCCACC
ACCAGCATCTACTGCACCTGCAGCCAACCAAGAACCTACCACTGCTGCTCCTGCCAGTTC
CCCGGCAGCAGGATTGGGTGGCTTGTTACAAAGTCTGGGTGCTACAGGGGCTGCTGCTAA
CAGTGGGGGGTCAGGTTTGTTTGGATCTGGCCTCCCTGAGTTAGACCAGATGCAACAACA
GCTAGCGGAAAATCCGAACTTGATGAGGGAAATAATGAATATGCCACTTATGCAGAATTT
GATGAACAGTCCTGAACTCATACGCAGTATAATAATGAACAATCCTCAAATGCGTGAGCT
TATTGATCGCAATCCAGATCTTGCTCATGTCCTCAATGATCCAAGCATCATGCGCCAGAC
TTTTGAAGCAGTTCGGAATCCTGAACTCATGAGGGAGATGATGCGGAACACAGACAGAGC
CATGAGCAACATTGAATCTTCTCCAGAAGGATTCAACATGCTCCGTCGCATGTATGAAAC
TGTCCAAGAGCCTTTTCTGAATGCAACAACAATGGGTAGCGAGGGTGATCGAAACTCGAA
TCCATTTGCTGCTCTTCTAGGAAACCAGGGGTCTAACCAAGCAAGAGACTCAGCTGCAAA
TGGAACAACTACAGCTTCAGACCCCACTTCAGGCTCTCCAGCTCCAAATACTAATCCACT
TCCAAATCCTTGGGGCCCAAATGCTGGCTCTACCCAAGGAGCAGCAAGGTCCCCTCCTGC
TAGCAACACTAGGAGTACCACAGCAAGTGGCCTAGGAGGGTTGGGTTCAGCAGATTTGGG
AAGTATGCTTGGTGCCAGTGGTGGTGGCTCTGATGCTACCTTCTTGACTCAAGTTTTGCA
AAACCCAACTATGATGCAGATGATGCAAAACATTATGTCTAATCCTCAGTCCATGAATCA
GCTGCTTAATATGAATCCAAATGTACGTAACATGATGGAATCCAATACTCAAATGAGAGA
AATGATTCAGAATCCAGAATTTCTTCGCCAGTTGACGTCTCCTGAAACATTGCAGCAATT
AATTTCATTCCAGCAGTCTTTGATGTCACAACTTGGCCAACAACAAGCTGGACAGGAGCG
GACACAATCAGGCTCTGGTGCAGGCAATGTCAACCTCAACACCTTGATGAACATGTTCAG
CGGGCTTGGTGCTGGTGGTGGCCTAGGTGTTCCAAATGCTCCTAATGTGCCGCCAGAAGA
ACTGTATGCAACACAATTAGCTCAGCTCCAAGAAATGGGTTTCTTTGACACACAGGAGAA
CATCCGAGCCTTGGCCGCTACCGCTGGAAATGTTCATGCTGCAGTGGAGCGACTTCTTGG
AAATATGGGCCAATAGAATATGATGATGATCATAACTGTTTTGTAGTTGGCGTTGTGAGA
TTATGTTTGGTTCATTGGTTTTACACCTGAGATTCAGAGGCGGCATCTAGATTCTGTGTT
TAAGGATGAATAAAGAGTGTACCGGTAGAACCTTTCATATACATGTGGTCTGGTGTCATG
GTTAAAATTGTTGTTGTTGGTACATTGGGTTGCTGTACATACACATTGATCTCTTGCAAT
GTACATGGACAATGTCTTTCTGT