Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER92840
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:77044134:77048800:1 gene:SORBI_3001G501300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGAGCCAAGGCGAGCCGTCTTCGTCGGATCCGAAGGGGAAGAAGGATTACTCGACG
GCGATCCTCGAGAGGAAGAAGTCGCCGAACCGGCTGGTGGTCGACGAGGCCACCAATGAT
GACAACTCCGTCGTCGCTCTGCACCCGGACACTATGGAGAGGCTCCAGCTCTTCCGCGGT
GACACTGTCCTGCTCAAGGGTAAGAAGAGAAAGGACACTATCTGCATCGTGCTTGCAGAT
GACACGTGTGAGGAGCCAAAGGTCCGAATGAATAAGGTTGTCAGGAAGAACTTGAGGGTA
CGGCTTGGTGATGTGGTATCTGTCCATCAATGCCCAGATGTCAAATACGGGAAGCGCGTG
CACATACTTCCAATTGATGACACCATTGAAGGCATCACTGGCAACTTATTTGACGCCTTT
CTAAAACCATACTTCCTTGAAGCCTATCGTCCTTTGAGGAAAGGAGACCTTTTCCTAGTC
AGAGGTGGCATGAGAAGTGTAGAATTCAAAGTCATAGAGACTGATCCTATAGAGTATTGT
ATCGTTGCACCAGATACAGAAATATTCTGTGAGGGTGAGCCTGTTAAGAGGGAGGATGAG
GAAAGACTTGATGAGGTTGGCTATGATGATGTTGGTGGAGTTAGAAAGCAGATGGCCCAA
ATTAGAGAACTGGTTGAACTTCCACTGCGTCATCCCCAGCTTTTCAAGTCTATTGGTGTG
AAGCCACCAAAGGGCATATTGCTGTTTGGGCCTCCTGGATCTGGCAAGACCCTTATTGCT
AGAGCTGTAGCTAATGAGACAGGTGCTTTCTTCTTTTTGATAAATGGGCCAGAAATCATG
TCAAAACTAGCAGGAGAAAGTGAAAGTAATCTCAGAAAGGCATTTGAAGAAGCTGAAAAA
AATGCACCTTCCATCATTTTTATTGATGAGATAGATTCCATAGCTCCTAAGAGAGAAAAG
ACCCATGGAGAAGTTGAAAGGCGTATTGTTTCACAGCTCTTGACTCTTATGGATGGTCTG
AAGTCTCGTGCACATGTTATTGTTATGGGTGCCACAAACCGTCCAAACAGTATCGATCCT
GCTCTTAGAAGGTTTGGTAGGTTTGATCGTGAGATTGATATTGGTGTTCCAGATGAAGTT
GGACGCCTTGAGGTTCTCCGGATTCACACCAAAAACATGAAGTTGGCTGAAAATGTTGAC
TTGGAGCTCATTGCGAAGGATACCCATGGTTATGTTGGTGCTGATCTTGCAGCCCTTTGT
ACCGAAGCTGCTCTTCAATGCATCCGTGAGAAGATGGATATTATAGATCTTGAGGATGAG
ACCATAGATGCTGAGATATTGAACTCTATGGCTGTCACAAATGACCATTTCAAGACTGCA
CTTGGGACAAGCAACCCATCTGCTCTGCGTGAAACTGTTGTTGAAGTTCCAAATGTCTCT
TGGGAAGATATTGGTGGTCTGGAAAATGTTAAGAGGGAGCTACAGGAGACTGTTCAATAT
CCTGTAGAGCATCCCGAGAAATTTGAAAAGTTTGGCATGTCTCCTTCAAAGGGTGTTTTG
TTTTATGGCCCTCCTGGCTGTGGCAAGACTTTGTTGGCCAAGGCAATTGCTAATGAATGC
CAGGCTAACTTCATTAGTGTGAAGGGTCCTGAACTGCTTACCATGTGGTTTGGTGAGAGC
GAGGCTAATGTCCGTGAGATTTTTGATAAGGCTAGGCAGTCTGCTCCATGTGTCCTCTTC
TTCGATGAGCTTGATTCCATTGCTACTCAGAGAGGAAGCAGTGTTGGTGACGCAGGTGGT
GCTGCTGATAGGGTGTTGAACCAGCTGCTTACTGAGATGGATGGCATGAATGCTAAGAAG
ACTGTTTTCATCATCGGTGCAACTAACAGACCAGATATCATTGACCCTGCCCTGCTGAGG
CCAGGGCGTCTGGATCAGCTTATCTACATTCCTCTACCTGATGAGCAATCCAGGCTCCAG
ATCTTCAAAGCCTGCCTCAGGAAGTCTCCTGTGGCTAAGGATGTCGACTTGAATGCTCTT
GCCAAATACACCCAGGGTTTCAGTGGTGCAGATATCACTGAGATCTGCCAGCGTGCGTGC
AAGTATGCTATCAGGGAGAACATCGAGAAGGATATCGAGAGGGAGCGGCGCAGGAAGGAC
AACCCTGAGGCTATGGAGGAAGACGAGGTAGACGACATTGCTGAGATCAAGGCTGCTCAC
TTCGAGGAGTCGATGAAGTTCGCCCGACGCAGTGTTAGTGATGCCGACATCCGCAAGTAC
CAGGCCTTCGCCCAGACACTCCAGCAGTCCCGTGGGTTTGGCAGCGAGTTCCGTTTCCCG
GACCAACCGACGGCAGCTGCGGGATCTGCTGGTGCGGCCGATCCTTTTGCATCCGCTGCA
GCAGCAGCTGACGATGATGACTTGTATAATTAG

Peptide Sequence

PEP ID

EER92840
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:77044134:77048800:1 gene:SORBI_3001G501300 transcript:EER92840 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASQGEPSSSDPKGKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRG
DTVLLKGKKRKDTICIVLADDTCEEPKVRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKRV
HILPIDDTIEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPIEYC
IVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLFGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAENVDLELIAKDTHGYVGADLAALC
TEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNVS
WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGG
AADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQ
IFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRKD
NPEAMEEDEVDDIAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP
DQPTAAAGSAGAADPFASAAAAADDDDLYN

Transcript Sequence

Transcript ID

EER92840
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:77044134:77048800:1 gene:SORBI_3001G501300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTCTTCATCTTCACTTGAGCCCCCGAACCCGAACGAACACCCGCAAATATCTGTCGCCGT
CCTCGCGAACAGCACCAACCGCCGCTCCGAATTCGATCGCCATGGCGAGCCAAGGCGAGC
CGTCTTCGTCGGATCCGAAGGGGAAGAAGGATTACTCGACGGCGATCCTCGAGAGGAAGA
AGTCGCCGAACCGGCTGGTGGTCGACGAGGCCACCAATGATGACAACTCCGTCGTCGCTC
TGCACCCGGACACTATGGAGAGGCTCCAGCTCTTCCGCGGTGACACTGTCCTGCTCAAGG
GTAAGAAGAGAAAGGACACTATCTGCATCGTGCTTGCAGATGACACGTGTGAGGAGCCAA
AGGTCCGAATGAATAAGGTTGTCAGGAAGAACTTGAGGGTACGGCTTGGTGATGTGGTAT
CTGTCCATCAATGCCCAGATGTCAAATACGGGAAGCGCGTGCACATACTTCCAATTGATG
ACACCATTGAAGGCATCACTGGCAACTTATTTGACGCCTTTCTAAAACCATACTTCCTTG
AAGCCTATCGTCCTTTGAGGAAAGGAGACCTTTTCCTAGTCAGAGGTGGCATGAGAAGTG
TAGAATTCAAAGTCATAGAGACTGATCCTATAGAGTATTGTATCGTTGCACCAGATACAG
AAATATTCTGTGAGGGTGAGCCTGTTAAGAGGGAGGATGAGGAAAGACTTGATGAGGTTG
GCTATGATGATGTTGGTGGAGTTAGAAAGCAGATGGCCCAAATTAGAGAACTGGTTGAAC
TTCCACTGCGTCATCCCCAGCTTTTCAAGTCTATTGGTGTGAAGCCACCAAAGGGCATAT
TGCTGTTTGGGCCTCCTGGATCTGGCAAGACCCTTATTGCTAGAGCTGTAGCTAATGAGA
CAGGTGCTTTCTTCTTTTTGATAAATGGGCCAGAAATCATGTCAAAACTAGCAGGAGAAA
GTGAAAGTAATCTCAGAAAGGCATTTGAAGAAGCTGAAAAAAATGCACCTTCCATCATTT
TTATTGATGAGATAGATTCCATAGCTCCTAAGAGAGAAAAGACCCATGGAGAAGTTGAAA
GGCGTATTGTTTCACAGCTCTTGACTCTTATGGATGGTCTGAAGTCTCGTGCACATGTTA
TTGTTATGGGTGCCACAAACCGTCCAAACAGTATCGATCCTGCTCTTAGAAGGTTTGGTA
GGTTTGATCGTGAGATTGATATTGGTGTTCCAGATGAAGTTGGACGCCTTGAGGTTCTCC
GGATTCACACCAAAAACATGAAGTTGGCTGAAAATGTTGACTTGGAGCTCATTGCGAAGG
ATACCCATGGTTATGTTGGTGCTGATCTTGCAGCCCTTTGTACCGAAGCTGCTCTTCAAT
GCATCCGTGAGAAGATGGATATTATAGATCTTGAGGATGAGACCATAGATGCTGAGATAT
TGAACTCTATGGCTGTCACAAATGACCATTTCAAGACTGCACTTGGGACAAGCAACCCAT
CTGCTCTGCGTGAAACTGTTGTTGAAGTTCCAAATGTCTCTTGGGAAGATATTGGTGGTC
TGGAAAATGTTAAGAGGGAGCTACAGGAGACTGTTCAATATCCTGTAGAGCATCCCGAGA
AATTTGAAAAGTTTGGCATGTCTCCTTCAAAGGGTGTTTTGTTTTATGGCCCTCCTGGCT
GTGGCAAGACTTTGTTGGCCAAGGCAATTGCTAATGAATGCCAGGCTAACTTCATTAGTG
TGAAGGGTCCTGAACTGCTTACCATGTGGTTTGGTGAGAGCGAGGCTAATGTCCGTGAGA
TTTTTGATAAGGCTAGGCAGTCTGCTCCATGTGTCCTCTTCTTCGATGAGCTTGATTCCA
TTGCTACTCAGAGAGGAAGCAGTGTTGGTGACGCAGGTGGTGCTGCTGATAGGGTGTTGA
ACCAGCTGCTTACTGAGATGGATGGCATGAATGCTAAGAAGACTGTTTTCATCATCGGTG
CAACTAACAGACCAGATATCATTGACCCTGCCCTGCTGAGGCCAGGGCGTCTGGATCAGC
TTATCTACATTCCTCTACCTGATGAGCAATCCAGGCTCCAGATCTTCAAAGCCTGCCTCA
GGAAGTCTCCTGTGGCTAAGGATGTCGACTTGAATGCTCTTGCCAAATACACCCAGGGTT
TCAGTGGTGCAGATATCACTGAGATCTGCCAGCGTGCGTGCAAGTATGCTATCAGGGAGA
ACATCGAGAAGGATATCGAGAGGGAGCGGCGCAGGAAGGACAACCCTGAGGCTATGGAGG
AAGACGAGGTAGACGACATTGCTGAGATCAAGGCTGCTCACTTCGAGGAGTCGATGAAGT
TCGCCCGACGCAGTGTTAGTGATGCCGACATCCGCAAGTACCAGGCCTTCGCCCAGACAC
TCCAGCAGTCCCGTGGGTTTGGCAGCGAGTTCCGTTTCCCGGACCAACCGACGGCAGCTG
CGGGATCTGCTGGTGCGGCCGATCCTTTTGCATCCGCTGCAGCAGCAGCTGACGATGATG
ACTTGTATAATTAGTTTAGCAGTCCTGTGACGCTTCTTGAGTACTTTCCTTCGTTATATA
TGCTTATTATATATATTAATGTTACACTTATGTGTAAGACACGGGCAGTGGCTGTACCTA
TACAGTTAAGTTAATATTTTATTAGTATAGGTCCTTAAATCGTGCCATCTGTTTTGCATG
CTTGCCTGGTGCCAACGTTTGTGTTGATTTGAGAAAAAAATGGCCAATTCTCCTCCCCGT
TTGGCATGGCTGCTCCAGCGACTTCAGAAGCCGTTTGGAGCCGTTTTGTGCCAAACGGGG
TAAAATAGAATGGCTCTACTAAGGAAGCCTCT