Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER92836
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:76965712:76972712:1 gene:SORBI_3001G500300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACTTCGACGAGTACGAGTATCTGGAGAAGACGGTGGAAGCGTCCGGAGCGCCGGCC
AACGGTTCGTCGGGCCCCGGGTCGGGGGACAAGGACAAGGAGCGCAGCTCACGCCGCCGC
TCATCGGGCGGTGACGAAGAGCGTGACGACGTAAAGCGCAGATCGAAGCGTTCTCGCTCC
GAGGAAGGCCGCGACCGCGATAGGGAGCGGCACAGGGATCGCGACCGGCACCGCAGCAGT
CGGGAGCGGCGGGACCGTGACCGTGACGGCAAGGAGAAAGAGCGGGACAGGGAGAAGGAC
AAGGACATGAGGAGCCGCGACCGTGACCTCGAACGGGAGAGGGAGAGGGAGAGGGAGAGG
GAGAAGGAGAAGGATAGGCAGCGGAGGAGCCGGAGCCGGTCGGAGCGGCACCGCGATGAC
GAAGGGCGTGATCGCTACCGTGAACGCGATGTCAGACGTAGGAAAGAGGAGGTTGCTGAA
CCTGAAGTTGATCCAGAAAGAGATCAGAGGACTGTGTTTGCTTTCCAGTTATCTTTGAAG
GCAGATGAAAGGGACGTATATGAGTTCTTTTCTAGAGCTGGAAAGGTCCGGGATGTTCGT
CTCATTATGGATCGAAATTCACGACGTTCTAAAGGTGTCGGGTATATTGAATTCTATGAT
GCTATGTCTGTTCCAATGGCGATAGCTCTTTCTGGTCAGTTGCTTCTTGGTCAACAAGTG
ATGGTTAAGCCTTCAGAGGCTGAAAAGAATTTAGTTCAGTCAAATGCTTCTTCAAGTGGA
GCTGCTTCAGGTGGAGCAAGGAAGTTGTATGTTGGAAATCTTCACTCGAACATTAATGAG
GACCAGTTGCGACAGGTCTTTGAACCATTTGGACAAGTGGAGCTTGTCCAGTTGCCATTG
GATCCTCTCACTGGGCTATGCAAAGGTTTTGGTTTTGTGCAGTTTGTACGTCTTGAAGAT
GCAAAAGCAGCTCAGAGTTTGAATGGGCAACTTGAGATTGCTGGAAGAGTCATCAAGGTT
TCAGCTGTGACAGACCAAGCAGGCGTGCAAGTTAGTGGAGCTACAGGAGATTTAGATGAT
GATGAAGGTGGAGGCTTGGCACTGAATGCCAGTTCCAGAGCTCTTCTAATGCAGAAGTTG
GACCGCAGTGGCATTACAACCAGTTTGACTGGTGGAATGGGTACTGCTGGTTTGAGTACT
CCAGTGGTAATACCAACTGTATCTGTCCTTGGTGCTGCTCCAGCTGCAGCTCCTCTTCTG
CACCCTACAGTGCCTGGTCTTGGTTCAATTCCTGGGGCAACTCTTCCAATTACTACCCCG
TCTATTGATTTGGCTCCACCTAGTGAATGCCTATTGCTCAAGAATATGTTTGATCCAGCT
TTGGAGACGGATCCTGATTTTGATTTGGACATTAGAGATGATGTTCAGGAGGAATGTTCC
AAGTTTGGTCAATTGAAACATATTTTTGTAGACAAAAATACTGCTGGTTTTGTGTACCTG
CGGTTTGATAGTATAACAGCAGCTATGAGCGCACAGAAAGCACTTCATGGAAGATGGTTC
GCAGGGAAGATGATAACAGCAACTTTTATGACCCCTCAACAGTATGAAATGAAGTTTCCG
AGCTAG

Peptide Sequence

PEP ID

EER92836
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:76965712:76972712:1 gene:SORBI_3001G500300 transcript:EER92836 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDFDEYEYLEKTVEASGAPANGSSGPGSGDKDKERSSRRRSSGGDEERDDVKRRSKRSRS
EEGRDRDRERHRDRDRHRSSRERRDRDRDGKEKERDREKDKDMRSRDRDLERERERERER
EKEKDRQRRSRSRSERHRDDEGRDRYRERDVRRRKEEVAEPEVDPERDQRTVFAFQLSLK
ADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQQV
MVKPSEAEKNLVQSNASSSGAASGGARKLYVGNLHSNINEDQLRQVFEPFGQVELVQLPL
DPLTGLCKGFGFVQFVRLEDAKAAQSLNGQLEIAGRVIKVSAVTDQAGVQVSGATGDLDD
DEGGGLALNASSRALLMQKLDRSGITTSLTGGMGTAGLSTPVVIPTVSVLGAAPAAAPLL
HPTVPGLGSIPGATLPITTPSIDLAPPSECLLLKNMFDPALETDPDFDLDIRDDVQEECS
KFGQLKHIFVDKNTAGFVYLRFDSITAAMSAQKALHGRWFAGKMITATFMTPQQYEMKFP
S

Transcript Sequence

Transcript ID

EER92836
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:76965712:76972712:1 gene:SORBI_3001G500300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAGCCAAACAAAATCGCTGGGTTTAGCCGCGGTGCCTCTGTTTCTCTCTTCTCGCTTAT
TAGGGTTTCCGGATCTGCTCGGCGTCGCCGCCGACCAACCTCCGCCGCGCGACGCCATGG
ACTTCGACGAGTACGAGTATCTGGAGAAGACGGTGGAAGCGTCCGGAGCGCCGGCCAACG
GTTCGTCGGGCCCCGGGTCGGGGGACAAGGACAAGGAGCGCAGCTCACGCCGCCGCTCAT
CGGGCGGTGACGAAGAGCGTGACGACGTAAAGCGCAGATCGAAGCGTTCTCGCTCCGAGG
AAGGCCGCGACCGCGATAGGGAGCGGCACAGGGATCGCGACCGGCACCGCAGCAGTCGGG
AGCGGCGGGACCGTGACCGTGACGGCAAGGAGAAAGAGCGGGACAGGGAGAAGGACAAGG
ACATGAGGAGCCGCGACCGTGACCTCGAACGGGAGAGGGAGAGGGAGAGGGAGAGGGAGA
AGGAGAAGGATAGGCAGCGGAGGAGCCGGAGCCGGTCGGAGCGGCACCGCGATGACGAAG
GGCGTGATCGCTACCGTGAACGCGATGTCAGACGTAGGAAAGAGGAGGTTGCTGAACCTG
AAGTTGATCCAGAAAGAGATCAGAGGACTGTGTTTGCTTTCCAGTTATCTTTGAAGGCAG
ATGAAAGGGACGTATATGAGTTCTTTTCTAGAGCTGGAAAGGTCCGGGATGTTCGTCTCA
TTATGGATCGAAATTCACGACGTTCTAAAGGTGTCGGGTATATTGAATTCTATGATGCTA
TGTCTGTTCCAATGGCGATAGCTCTTTCTGGTCAGTTGCTTCTTGGTCAACAAGTGATGG
TTAAGCCTTCAGAGGCTGAAAAGAATTTAGTTCAGTCAAATGCTTCTTCAAGTGGAGCTG
CTTCAGGTGGAGCAAGGAAGTTGTATGTTGGAAATCTTCACTCGAACATTAATGAGGACC
AGTTGCGACAGGTCTTTGAACCATTTGGACAAGTGGAGCTTGTCCAGTTGCCATTGGATC
CTCTCACTGGGCTATGCAAAGGTTTTGGTTTTGTGCAGTTTGTACGTCTTGAAGATGCAA
AAGCAGCTCAGAGTTTGAATGGGCAACTTGAGATTGCTGGAAGAGTCATCAAGGTTTCAG
CTGTGACAGACCAAGCAGGCGTGCAAGTTAGTGGAGCTACAGGAGATTTAGATGATGATG
AAGGTGGAGGCTTGGCACTGAATGCCAGTTCCAGAGCTCTTCTAATGCAGAAGTTGGACC
GCAGTGGCATTACAACCAGTTTGACTGGTGGAATGGGTACTGCTGGTTTGAGTACTCCAG
TGGTAATACCAACTGTATCTGTCCTTGGTGCTGCTCCAGCTGCAGCTCCTCTTCTGCACC
CTACAGTGCCTGGTCTTGGTTCAATTCCTGGGGCAACTCTTCCAATTACTACCCCGTCTA
TTGATTTGGCTCCACCTAGTGAATGCCTATTGCTCAAGAATATGTTTGATCCAGCTTTGG
AGACGGATCCTGATTTTGATTTGGACATTAGAGATGATGTTCAGGAGGAATGTTCCAAGT
TTGGTCAATTGAAACATATTTTTGTAGACAAAAATACTGCTGGTTTTGTGTACCTGCGGT
TTGATAGTATAACAGCAGCTATGAGCGCACAGAAAGCACTTCATGGAAGATGGTTCGCAG
GGAAGATGATAACAGCAACTTTTATGACCCCTCAACAGTATGAAATGAAGTTTCCGAGCT
AGTGGACAGATCACAGATGCTTGGTTAACATGGACATAGTTGCTTGGGCTCAGTACTGGC
ATTTCTACATTTTAGCGTTTTGAGCTTGTGTCAACTATTAGTGGAGGAAAATGCTTGGGC
TCAGTACCGGCATTTCTACATTTTAGTGTTTTGATTTGAGCTTGTGTCAACTATTAGTGG
AGGAAAATGTAGTGGCTTTCTCGTAACATTTTGTCATTAATCGGTTTGTAACATGGTTTA
TGTATCACCTACCATTTTGACAATTGTTCTTTTTTTTTCTTTTGCGGATCATAGTATAGA
CTCAGACATTTTCATGCAT