Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER92544
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:71326301:71332230:1 gene:SORBI_3001G434700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAAGTGGTGGCGTCGGCGCCGGGGAAGGTGCTCATCGCGGGAGGATACCTCGTGCTG
GAGCGCCCCAACGCCGGCCTGGTCCTCAGCACCACCGCCCGCTTCTACGCCGTCGTCCGC
CCCATCCGCGACAGCCTCCCCGCCGACTCCTGGGCCTGGGCGTGGACGGATGTGAAAGTG
ACTTCCCCTCAGCTCTCCCGGGAGGCCACATACAAGTTGTCTCTAACGAAATCGACACTG
CAATTGACGTCTGCAAGGGAATCTACAAACCCTTTTGTTGAGCAGGCCATACAGTTCTCC
GTAGCAGCTGCTAAATCGATCATCACTGATAAGGACAAGAAGGATGCTATAGATAAGCTG
CTGTTGCAAGGTCTGAACATTACAATTCTTGGTTGCAATGATTTCTATTCTTATAGAAAG
CAGATCGAAGCACGTGGTCTTCCTCTTACTACGGAGGTATTGCTTTCATTGCCTCCATTC
TCTTCAATTACATTTAACTCAGAGGTTGCTAATGGAACAACGACTGGAGAGAAATGTAAA
CCTGAAGTAGCCAAAACTGGACTTGGGTCATCAGCTGCCATGACCACATCAGTTGTTGCA
GCTCTTCTTCACTACCTTGGTGCTGTTAACCTTTCATGTCCGGGACAACCTTCCGGTGAT
AATGCAACTGGACGAGGTCTTGACTTGGTTCACGCTATTGCCCAAAGTGCACATTGTATA
GCACAAGGGAAAATTGGAAGTGGTTTTGATGTTAGTGCTGCTGTCTATGGGAGTCAACGC
TATGTAAGGTTTTCTCCAGAAATACTCTCCTCGGCTCAGGCTACAGGTGGGACTTTCTTG
CCAGATGTAGTATCCGATATTGTTACACAAAGGTGGGATCATGAGAATAAACAGTTTTCA
TTACCCCCTCTGATGACCCTTCTCCTTGGGGAACCTGGAACCGGAGGATCATCTACTCCA
TCAATGGTTGGATCTGTGAAACGGTGGCAGAAGTCTGACCCTGAGAAATCCAAAGATACA
TGGAGTAAACTGGCCATTGCCAATTCAGCGCTGGAGAACCAACTGAGAATCTTAAAAGGA
CTTTCTGAAAATCACCGGGAGGCATATGAGTCTGTAGTGCGGTCCTGTAGTCATCTCACA
TATGGGAAGTGGACAGAGGTGGCTACTAACCAAGATCAAGAATTAATTGTTAGATCATTG
TTGGCTGCAAGGGATGCTTCCCTTGAGATAAGGCTTCACATGCGAGAGATGGGTATAGCA
GCCGGTGTTCCAATTGAGCCAGATTCACAAACACAGCTACTAGATGCCACTATGAATATG
GAGGGTGTTTTACTGGCTGGAGTTCCTGGAGCTGGTGGTTTCGATGCAGTATTCTCAGTG
ACTTTGGGGGATGCAAATAATGCTGTAGCAAATGCTTGGAGCTCAGCTGGCGTTCTGCCA
CTTCTTGTACGAGAAGACTGCCGTGGTGTTTCATTGGAAGATGCTGACCCAAGAACAAGG
GAGGTCTCAGCAGCTGTATCGTCCATTCAGATTAATTGA

Peptide Sequence

PEP ID

EER92544
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:71326301:71332230:1 gene:SORBI_3001G434700 transcript:EER92544 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEVVASAPGKVLIAGGYLVLERPNAGLVLSTTARFYAVVRPIRDSLPADSWAWAWTDVKV
TSPQLSREATYKLSLTKSTLQLTSARESTNPFVEQAIQFSVAAAKSIITDKDKKDAIDKL
LLQGLNITILGCNDFYSYRKQIEARGLPLTTEVLLSLPPFSSITFNSEVANGTTTGEKCK
PEVAKTGLGSSAAMTTSVVAALLHYLGAVNLSCPGQPSGDNATGRGLDLVHAIAQSAHCI
AQGKIGSGFDVSAAVYGSQRYVRFSPEILSSAQATGGTFLPDVVSDIVTQRWDHENKQFS
LPPLMTLLLGEPGTGGSSTPSMVGSVKRWQKSDPEKSKDTWSKLAIANSALENQLRILKG
LSENHREAYESVVRSCSHLTYGKWTEVATNQDQELIVRSLLAARDASLEIRLHMREMGIA
AGVPIEPDSQTQLLDATMNMEGVLLAGVPGAGGFDAVFSVTLGDANNAVANAWSSAGVLP
LLVREDCRGVSLEDADPRTREVSAAVSSIQIN

Transcript Sequence

Transcript ID

EER92544
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:71326301:71332230:1 gene:SORBI_3001G434700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACCTGGGCCGTCAGACTCGCGTCGCGTCGTGGCGCCCCCACGGCGGCACGGCCACATCGC
CGACTTCTCCTCGGTTCCTCCGCACCCGCACGCGGCACGCTTCCTCCCCCGCGCCCACCC
GTCGCCGTGATCGCCAGAGCGTTCCCCTGCCGCGCTGTTCGGCCCGTTCCACTCCAGCGA
AGCTTCCAGCAGAGGCGGCCGCCGGATCGAGTCTCTGCCGCCGAGGAGTCGAAGACCATG
GAAGTGGTGGCGTCGGCGCCGGGGAAGGTGCTCATCGCGGGAGGATACCTCGTGCTGGAG
CGCCCCAACGCCGGCCTGGTCCTCAGCACCACCGCCCGCTTCTACGCCGTCGTCCGCCCC
ATCCGCGACAGCCTCCCCGCCGACTCCTGGGCCTGGGCGTGGACGGATGTGAAAGTGACT
TCCCCTCAGCTCTCCCGGGAGGCCACATACAAGTTGTCTCTAACGAAATCGACACTGCAA
TTGACGTCTGCAAGGGAATCTACAAACCCTTTTGTTGAGCAGGCCATACAGTTCTCCGTA
GCAGCTGCTAAATCGATCATCACTGATAAGGACAAGAAGGATGCTATAGATAAGCTGCTG
TTGCAAGGTCTGAACATTACAATTCTTGGTTGCAATGATTTCTATTCTTATAGAAAGCAG
ATCGAAGCACGTGGTCTTCCTCTTACTACGGAGGTATTGCTTTCATTGCCTCCATTCTCT
TCAATTACATTTAACTCAGAGGTTGCTAATGGAACAACGACTGGAGAGAAATGTAAACCT
GAAGTAGCCAAAACTGGACTTGGGTCATCAGCTGCCATGACCACATCAGTTGTTGCAGCT
CTTCTTCACTACCTTGGTGCTGTTAACCTTTCATGTCCGGGACAACCTTCCGGTGATAAT
GCAACTGGACGAGGTCTTGACTTGGTTCACGCTATTGCCCAAAGTGCACATTGTATAGCA
CAAGGGAAAATTGGAAGTGGTTTTGATGTTAGTGCTGCTGTCTATGGGAGTCAACGCTAT
GTAAGGTTTTCTCCAGAAATACTCTCCTCGGCTCAGGCTACAGGTGGGACTTTCTTGCCA
GATGTAGTATCCGATATTGTTACACAAAGGTGGGATCATGAGAATAAACAGTTTTCATTA
CCCCCTCTGATGACCCTTCTCCTTGGGGAACCTGGAACCGGAGGATCATCTACTCCATCA
ATGGTTGGATCTGTGAAACGGTGGCAGAAGTCTGACCCTGAGAAATCCAAAGATACATGG
AGTAAACTGGCCATTGCCAATTCAGCGCTGGAGAACCAACTGAGAATCTTAAAAGGACTT
TCTGAAAATCACCGGGAGGCATATGAGTCTGTAGTGCGGTCCTGTAGTCATCTCACATAT
GGGAAGTGGACAGAGGTGGCTACTAACCAAGATCAAGAATTAATTGTTAGATCATTGTTG
GCTGCAAGGGATGCTTCCCTTGAGATAAGGCTTCACATGCGAGAGATGGGTATAGCAGCC
GGTGTTCCAATTGAGCCAGATTCACAAACACAGCTACTAGATGCCACTATGAATATGGAG
GGTGTTTTACTGGCTGGAGTTCCTGGAGCTGGTGGTTTCGATGCAGTATTCTCAGTGACT
TTGGGGGATGCAAATAATGCTGTAGCAAATGCTTGGAGCTCAGCTGGCGTTCTGCCACTT
CTTGTACGAGAAGACTGCCGTGGTGTTTCATTGGAAGATGCTGACCCAAGAACAAGGGAG
GTCTCAGCAGCTGTATCGTCCATTCAGATTAATTGATTCTACTGTTAATAGTTCTATTTA
TGTATGTATGGTGTACCATTATTTATTATCTCGTTCTTTTAGAAGTACCAAATTGTGCCG
AATGCTAGGAGGTACGTGGTTAAAATAAGTGCTGCACTTGCAGCAGGATAGCACGTTATT
TACAACGACTGTTCATGAGTGTAGAAAATAAGGAATTCTAGGGATTTCCATGGAATTAGT
GCTTGTAGCTATGGAATATACGTGAGGAAATGTCAAGCTATTCAATCAACAAACTCATAC
TGTAAACCTTGTATTTGCAACTGTTTAACATGGTTTGTATGATAATTCAGCATGTGTTAG
TGTTTGAAAGGAGGTGTGGGTGTGGTTTATATGATGATGGTGTTTGATATTTGACCTTAT
CCTATGATAGGCCGTGCTTTGGCTTCCGGGTGAAGAAACAGAGGGCGTATAACTGTGGAA
TGAAGAAATGGCCAGAGTCCAAAGGCTTTTCATTTTGATTTTTGAGGTCGTGGGCTATGA
TTTGGCTTTGGATACCGGATGTGGCCACTGCCCAGCTGGGTAGAATGTTGCCTAGCGTGC
AAATGCTTTCCTCCTGCCAGTGGTACTATTCGCCAATCAATCGATTCGATTTGTTCCTAA
GATAGCCAAGGTATTCCTCAATTAGTCAATTTGGCACCTCTTACATAAATCAGTGGAAAC
TATTGCCTTCACTGAAGGTTATAAGCAGCTCCTGGGTGTCACTCTTACAACTTTTTTGAC
CTTTGACTTGTGTTAGGAGTGAATGTAAATGAACAAGATTTGGAAAAACAATCAATTCCA
TTGATCTCGTTGATATATATACACATGTGAAGGGGTGTGTCGAAGGGATAACTATTCTCA
AAGGACATGTCCTTTGGGACTAAACTATCCACTAATCTTATACTTGATGGATGAGATCAC
TCGTGAAGAGATGCCTGTTCGTGTGTGTCTGTAGACACCTATTTGTGTAGGTGTTGTTTC
ATAACAATTTGCACTCTATATGCTGCCGAAAGCGCGTGTCCTGGTAGAACCCTTTCACCC
TCATATGCTACACCTACACCTACGAGCATACGACTACGTGAGCCTACGACTACTTTGACA
CTGACAGCACAGCATCTTCGTGCTCTGGTCTGCTCATTTACTTAGCTTTCCCCACTGTGT
AATTGTTAGTGATCATGTTTAGATTAAGGCCAGGAGGTCCTGTTTTAAGTGTCAAGATCA
TGTTTTGTTATTGTTAAATGCCAGTTCAACATTATCTATACACGGTGGGTATCTGAACTG
TATCAAAACAATTCAGCATATCATGTCTATGTTGAAGTACCGCATGCTTGTTCTTATCCT
AGCCTGGATAGGGCTCACTTATTAGGGGTGAGGAAATGCGGAAGATCTACGGCAAGATAT
ACTTTTTCTAGTTTGAGGCATCAAGGAGGCCAGCTTGTTTGTAGGCTATAAATTTGGCTT
TGGCTTTTCGGAAAAGCTGAAGGTCACGGAATGCCAGG