Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER92480
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:70172023:70175786:1 gene:SORBI_3001G420700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGTCGAGCACGATCCGGAAGGCGCTGGGCGCGGTGAAGGACCAGACCAGCATCGGC
CTCGCCAAGGTCACCAGCAACATCGCGCCCGAGCTGGACGTGCTCATCGTCAAGGCCACC
AGCCACGACGACGAGCCGGCCGAGGAGCGCCACATCCGCGAGATCCTCCACCTTACGTCC
GGATCCCGCGCCCACGTTGCTGCTGCAGTGGCAGGGTGCTCCCGGAGGCTCTCCCGCACT
CGCGACTATGTGGTCGCGCTCAAGTCGCTCATGCTCGTGCACCGCCTCCTGGTGGATGGC
GACCCGTCCTTCCACCGCGAGCTCCTCCACGCCACGCGGCGGGGCACCCGCCTGCTCAAC
CTCTCTGATTTTCGGGACGAGGCGCACTCTGGATCCTGGGATCACTCTGCCTTTGTCCGC
ACCTATGCGCTCTACCTTGATCAGCGCCTCGAGTTCTTCCTCCATGAGCGCAAGCAGGGG
TCAAATAATGGCAGCAGCAGCAGCCATAATGGTCCTTCACCACGGGACCGTGACCGTTGG
GGTTCGCCTGATCCCTATGGCCGCCGCTCTCCCTCCTACTCGTCGCCCCCTGGATATGGA
GGATATGATGATTACCGCGAGAGGAATGGTGGGAACAATGATGACAAGAGGCCGCCAACC
CCAGTGAGGGATATGAAGCCAGAGAGGGTCCTTGCTCGTATGCACCACCTGCAGCAGCTG
CTTGACAGGTTCCTTGCTTGCCGCCCCACTGGTGGAGCAAAGCACAGCAGAATGGTGCTG
GTTGCGCTGTATCAGATTGTGAGAGAGAGCTTCCAGCTCTACGCCGATATCTGCGAGGTG
CTGGCGGTGCTGCTGGACAGGTTCTTTGACATGGAGTATGCCGAGTGCGTGAAGGCTTTT
GAGGCATATGCTAGTGCTGCAAAGCAGATTGATGAGCTCTGTGCATTCTATTCATGGTGT
AAAGATACCGGAGTTGCAAGGTCATCTGAGTACCCAGAGGTGCAGCGTGTCACTGATAAG
TTGCTGGAGACGCTGGAAGAATTTATGAGGGACCGGGCAAAGAGGCCAAAGAGCCCACCA
CGGGAGCCTGAACCTGAGCCTGTCAAGGAAGAACCTGAGCCGGATATGAACAGCATCAAG
GCGCTTCCAGCACCAGAAGATTATAAGGAGCCGGAACCTGAGAAGGTGGAGGAAGAGGTG
AAGCCAGAGCCACCCCCGCAGCCACAGGGTGACCTGGTGGATCTCAGAGAAGATACTGTT
ACCGCCGATGAGCAAGGTAATAGGCTTGCTCTAGCTCTCTTTCAGGGGCCACCTGCTGCT
GGTGGAGGCAATGGTTCATGGGAGGCTTTCCCTTCAAATGGTGGCAACGAGGTGACTTCG
GCATGGCAGAATCCTGCAGCTGAACCTGGGAAGGCTGATTGGGAGCTTGCCCTTGTAGAG
ACAGCAAGCAATTTGTCCAAGCAAAAGCCAGCAATGTCAGGTGGTATGGACCCGCTGCTG
CTGAATGGTATGTATGACCAGGGTGTTGTGCGCCAGCATGTCAGTGCACAGGTGACCACC
GGGAGTGCCAGCAGCGTCGCCCTACCTGCTCCTGGACAGAAGACTCAGATGCTTGCTCTG
CCTGCACCGGATGGTTCAATGCAGGCTGTTGGTGGTGACCCCTTTGCCGCGTCCCTTGCT
GTCCCACCACCGTCCTATGTGCAGATGGCAGATTTGGAGAAGAAGCAACAACTCTTGACG
CAGGAACAAGTTATGTGGCAGCAGTACCAGAGGGACGGCATGCAAGGGCAATCGAGCCTT
AACAAGCTCGACCGGGCTTACAACAATGGTTTTGCCCCCAACCCGGCCATGCCTTATGGG
ATGCCCACAGCATACAACACGAACCCCATGCCAATGGCTTACACAGGGAACACTGGGTAT
TACTACCCTACTTACTGA

Peptide Sequence

PEP ID

EER92480
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:70172023:70175786:1 gene:SORBI_3001G420700 transcript:EER92480 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSSSTIRKALGAVKDQTSIGLAKVTSNIAPELDVLIVKATSHDDEPAEERHIREILHLTS
GSRAHVAAAVAGCSRRLSRTRDYVVALKSLMLVHRLLVDGDPSFHRELLHATRRGTRLLN
LSDFRDEAHSGSWDHSAFVRTYALYLDQRLEFFLHERKQGSNNGSSSSHNGPSPRDRDRW
GSPDPYGRRSPSYSSPPGYGGYDDYRERNGGNNDDKRPPTPVRDMKPERVLARMHHLQQL
LDRFLACRPTGGAKHSRMVLVALYQIVRESFQLYADICEVLAVLLDRFFDMEYAECVKAF
EAYASAAKQIDELCAFYSWCKDTGVARSSEYPEVQRVTDKLLETLEEFMRDRAKRPKSPP
REPEPEPVKEEPEPDMNSIKALPAPEDYKEPEPEKVEEEVKPEPPPQPQGDLVDLREDTV
TADEQGNRLALALFQGPPAAGGGNGSWEAFPSNGGNEVTSAWQNPAAEPGKADWELALVE
TASNLSKQKPAMSGGMDPLLLNGMYDQGVVRQHVSAQVTTGSASSVALPAPGQKTQMLAL
PAPDGSMQAVGGDPFAASLAVPPPSYVQMADLEKKQQLLTQEQVMWQQYQRDGMQGQSSL
NKLDRAYNNGFAPNPAMPYGMPTAYNTNPMPMAYTGNTGYYYPTY

Transcript Sequence

Transcript ID

EER92480
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:70172023:70175786:1 gene:SORBI_3001G420700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCGCGCACCATTTCCTTTCCTCTATATTCTATCCCTCCTCGGCTCCTCCCCCCCTCTTGC
CCGAGTTGCTAGCCTCCCTGCCTGCCCCGGCCCGCCTCCTCCTCCCGTCGTCGCCGTGGA
CCGCTTCCTCCACCTCCACTCCTCCGCTTCCACAGCACCCGAGCGAGGTCAACTCGTCCT
CCGGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGGGCGGGAGCGGTGAAGG
GACGGGAGGGTCCCGGATCTGAGCCGAGCTTCGCTCTCCGCGCGCCCGTCACCGCCCACC
AACACCCGACACCCAGGTCTTGTCGCCCCGCGCAGATCTGCAGCTGCTCCTGAGGTAAAT
CGTCGATTGCTTGAACCGTACCCGGTAGATCCGGTATGCTTCCGCGAGCAGAGGGTAGTT
CCGTTGCGAGACTAGCTTCGCGGCTAGACCTGCCTGCTCTAGTAGCCGATAAGCATCGGC
TAGTATATCTACTAGGCACCCTATATTTGGTAGATTCGGCAAATGGAGTGAAATCCGGCC
TCCCGGCTCCGCGGATCTCTCGAACTCCGTTGATTCCTTGATTCCTTTCCATAGAACCCT
GCGAAATTGCAGGGATCTGCGCGTGCCAAAGCGCCTAACTGACTAGATACGGAGTATTAC
CGAAAGCGAACATCGCCGGAATTTTTTTCTAATTTCTATAAAACTCATCATATGGTTCAT
TTTTGTGGCTCAGATCTAAATCGAAGCTTGAGCTCCGGTTGGTGGTGGTTGGTCGGTACC
TAGAGGGCGGCGGCGTCAGCGGCAGGGGAGGTGGGCTGTGAGGATGTCGTCGAGCACGAT
CCGGAAGGCGCTGGGCGCGGTGAAGGACCAGACCAGCATCGGCCTCGCCAAGGTCACCAG
CAACATCGCGCCCGAGCTGGACGTGCTCATCGTCAAGGCCACCAGCCACGACGACGAGCC
GGCCGAGGAGCGCCACATCCGCGAGATCCTCCACCTTACGTCCGGATCCCGCGCCCACGT
TGCTGCTGCAGTGGCAGGGTGCTCCCGGAGGCTCTCCCGCACTCGCGACTATGTGGTCGC
GCTCAAGTCGCTCATGCTCGTGCACCGCCTCCTGGTGGATGGCGACCCGTCCTTCCACCG
CGAGCTCCTCCACGCCACGCGGCGGGGCACCCGCCTGCTCAACCTCTCTGATTTTCGGGA
CGAGGCGCACTCTGGATCCTGGGATCACTCTGCCTTTGTCCGCACCTATGCGCTCTACCT
TGATCAGCGCCTCGAGTTCTTCCTCCATGAGCGCAAGCAGGGGTCAAATAATGGCAGCAG
CAGCAGCCATAATGGTCCTTCACCACGGGACCGTGACCGTTGGGGTTCGCCTGATCCCTA
TGGCCGCCGCTCTCCCTCCTACTCGTCGCCCCCTGGATATGGAGGATATGATGATTACCG
CGAGAGGAATGGTGGGAACAATGATGACAAGAGGCCGCCAACCCCAGTGAGGGATATGAA
GCCAGAGAGGGTCCTTGCTCGTATGCACCACCTGCAGCAGCTGCTTGACAGGTTCCTTGC
TTGCCGCCCCACTGGTGGAGCAAAGCACAGCAGAATGGTGCTGGTTGCGCTGTATCAGAT
TGTGAGAGAGAGCTTCCAGCTCTACGCCGATATCTGCGAGGTGCTGGCGGTGCTGCTGGA
CAGGTTCTTTGACATGGAGTATGCCGAGTGCGTGAAGGCTTTTGAGGCATATGCTAGTGC
TGCAAAGCAGATTGATGAGCTCTGTGCATTCTATTCATGGTGTAAAGATACCGGAGTTGC
AAGGTCATCTGAGTACCCAGAGGTGCAGCGTGTCACTGATAAGTTGCTGGAGACGCTGGA
AGAATTTATGAGGGACCGGGCAAAGAGGCCAAAGAGCCCACCACGGGAGCCTGAACCTGA
GCCTGTCAAGGAAGAACCTGAGCCGGATATGAACAGCATCAAGGCGCTTCCAGCACCAGA
AGATTATAAGGAGCCGGAACCTGAGAAGGTGGAGGAAGAGGTGAAGCCAGAGCCACCCCC
GCAGCCACAGGGTGACCTGGTGGATCTCAGAGAAGATACTGTTACCGCCGATGAGCAAGG
TAATAGGCTTGCTCTAGCTCTCTTTCAGGGGCCACCTGCTGCTGGTGGAGGCAATGGTTC
ATGGGAGGCTTTCCCTTCAAATGGTGGCAACGAGGTGACTTCGGCATGGCAGAATCCTGC
AGCTGAACCTGGGAAGGCTGATTGGGAGCTTGCCCTTGTAGAGACAGCAAGCAATTTGTC
CAAGCAAAAGCCAGCAATGTCAGGTGGTATGGACCCGCTGCTGCTGAATGGTATGTATGA
CCAGGGTGTTGTGCGCCAGCATGTCAGTGCACAGGTGACCACCGGGAGTGCCAGCAGCGT
CGCCCTACCTGCTCCTGGACAGAAGACTCAGATGCTTGCTCTGCCTGCACCGGATGGTTC
AATGCAGGCTGTTGGTGGTGACCCCTTTGCCGCGTCCCTTGCTGTCCCACCACCGTCCTA
TGTGCAGATGGCAGATTTGGAGAAGAAGCAACAACTCTTGACGCAGGAACAAGTTATGTG
GCAGCAGTACCAGAGGGACGGCATGCAAGGGCAATCGAGCCTTAACAAGCTCGACCGGGC
TTACAACAATGGTTTTGCCCCCAACCCGGCCATGCCTTATGGGATGCCCACAGCATACAA
CACGAACCCCATGCCAATGGCTTACACAGGGAACACTGGGTATTACTACCCTACTTACTG
AGGAAGCCTATTCTTTGTTCATCCTTACAGTTGCTGTGAATTTTTGTTCTGTGTTGTGAT
CTTACTCCCAGCCCTGGGGTTGTGTCCAGCATCAGCTGTTGTTCCCCTGTCTCTGGATCA
AACCTTTTGGTCTGATATATGTAATGTAATTTTATTTGTTTGGAACCAAATGCAGCATCC
GAGGGTGGCTATAGTTGATTACATAATCTCAATTGATCTTTATACTGTTTTTTTGGCTAG
TCTTCTGCATGTTATCACTTTTCTTAACTTGATGTTGCAGTGCGTTGTTGGGGTGACTGT
CACAGCGATGTTGTTGCATTATTTGCATGTAGTTCCTGACACAGTGGTACTGCGTGTTGC
ATCTATATCTTCCTGCTGTTAGGAGAAATGATCTGCGTCTCAGATCTAGATTGCCATGTT
TGTTGGAAAAGCTTGCTGGTTGTTGGTATTAAGGGTGTCATGTTTGGTGGTAACCAAGTT
ATAACTATTTTTGTTGTGAGTTGTGACCAACTCTTTTCCGAAATAGACTTGAGAGGCCCT
ACTTTTTATCATGCTGCTCTTTGAAGCCATGAAGTCTGGTGTGTGGACCTCTTGGACTAC
AATGGCGATAGTTAATTCTTGAAGAGTACATTTTAGAAATGAAGAAGGAAGAAAACTGTC
GAAAAGGTTTTGAAATTGGTTGAAAACGACTTTTTATGTTTTGCTAAGCTCGGAAACTCT
ATCATAATGTATGGTACGGGAATTTCTGTCACCCCTGCTTCCACCCAATTCTTTCCAGCC
ACGGTGAAAATTAAAATGGTCTACAGTTATTAGTTCATTTCTTCGCTAGCTTTGGTAGTG
CTTGTGGACGACTTCCGCAGGCTAAAACATTCATCATTGAATAAATCACAGTGACCTAAT
TTGTGGTCCGTCGCTGACTCTTGATCTGATCCATTATTAGGGAGGCAGCCAGGCAGCGGT
AGTGCTAGCTTGACCTGGACAACTTTGGGGTGCCATAAATAAAC