Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER92103
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:62090390:62094167:1 gene:SORBI_3001G332400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGTTCCTGTACTTCCAAGTCTGCCCTTGAGCATAGGAGGCCAGCAAGGTATTACACC
AGAGGGCGAAGAGTCCGCAGCCGTCGGTCCATCATGCCAGAGGCACCCCAGTCACAACAG
TTGAGCGATCCCAGAGGACGCATGACCGGCTTCTCCATGAGCGAGATTGTCCATGTGGAG
ACGGCCAACAGAGGCAAGTCAGAGCATTCCAAGACATTCCACCTTACGCAGATGGAGTGG
CACCACAGCCAGAGGGACTCTAAAGGTTGCAGCAATGAAGATGCCTGGTTTGATTCTGTC
AGTATCCTTGAAGATGATTCTGATGATGAATTCAAGAGTGTCTATGGAGATAGTTCGGAC
GAAGATGAGGAGCAGAAAAAGCAATATGAGAGCGCTTCCAGTTTTGCTGATGCACTCTCT
CGCATTGGAGACATGTGCCGTGGTGTGCCCATGACATTATCTGTTGAACAGTACCTGAAA
AAAGATAATGGTGATGATCCTGGACGTAGGAGCCAAAGCATGACCGTGCGTACCAGCAAG
TGTGTACCATCCTCCTTTAGCCTCAAGGGCTTGAAGGATAAAAATGATACAGATGATGAT
AACAAGGAGAGCTCCACGCCATCCCGCTTACGCCAGCTGCTGCACTCTATCAGCTTCAAT
GACAAGATGCAGCAGTTGACAGGTGGCAGCCCTGCAAAAAGGAAATCCACAGTCATCCGG
CTCTCATACAAGACAACATCATGTGATGACTATGAAGACAGCGGTGAATGCGGTAAATCG
AAGAAATTTGTTGTCCGTCCAAAGGTAGGGCAAACAATCCCATATGGAGGAGAGAAGCCA
ACAACAGGATGTTGGTCACGGATTGATCCTTCCATCTTCAAGTTGAGGAGTGAGACCTTC
CTAAAAGATAAGAAGAAATGTGCAGCTCCAAATTATGCTGCTTATTATCCAATAGGTGTT
GACCTGTTTGCCTGCCCCAAGAAGGTCCATCACATTGCTCAGCACCTCGACCTTCCACAA
ATCAAAACACACCCCAAGCTCCCATCACTTTTGATTGTGAACATCCAGATGCCTACCTAT
CCTGCTGCTATGTTCCTCGGTGACAGTGACGGAGAAGGCTTAAGCCTTGTCTTGTACTTT
AGGGTATCTGAATACTATGACAAAGAGGTTTCTGAACATTTCAAGGAATCCATCATGAGA
TTTTTTGAGGATGAAACTGAGAAGGTAAAGGGGTTTACGTCAGAATCTACCATCAGTTAC
AGAGATCGACTGAAGATCATGGCTGGATTGGTCAACCCAGATGACCTCCAGTTGGGTTCT
ACAGAGAAGAAGCTTGTCCAAGCATACAATGAGAAGCCAGTCCTCTCACGGCCCCAACAT
ACTTTCTATGAGGGAGAGAACTACTTTGAGGTAGACCTTGACATACACCGGTTCAGCTAC
ATTGCTAGGAAGGGACTGGACTCATTCAGGGAACGCCTAAAGAATGGAATCCTCGATATG
GGGTTAACAATTCAGGCCCAGAAGCAGTCGGAGCTCCCTGAGCAGGTCCTCTGCTGTGTT
AGGCTGAACAAGATTGATTTCACTAACGAAGGAGTTCCAACAATAGTCGCAGCTGATGAC
AAGTGA

Peptide Sequence

PEP ID

EER92103
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:62090390:62094167:1 gene:SORBI_3001G332400 transcript:EER92103 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGSCTSKSALEHRRPARYYTRGRRVRSRRSIMPEAPQSQQLSDPRGRMTGFSMSEIVHVE
TANRGKSEHSKTFHLTQMEWHHSQRDSKGCSNEDAWFDSVSILEDDSDDEFKSVYGDSSD
EDEEQKKQYESASSFADALSRIGDMCRGVPMTLSVEQYLKKDNGDDPGRRSQSMTVRTSK
CVPSSFSLKGLKDKNDTDDDNKESSTPSRLRQLLHSISFNDKMQQLTGGSPAKRKSTVIR
LSYKTTSCDDYEDSGECGKSKKFVVRPKVGQTIPYGGEKPTTGCWSRIDPSIFKLRSETF
LKDKKKCAAPNYAAYYPIGVDLFACPKKVHHIAQHLDLPQIKTHPKLPSLLIVNIQMPTY
PAAMFLGDSDGEGLSLVLYFRVSEYYDKEVSEHFKESIMRFFEDETEKVKGFTSESTISY
RDRLKIMAGLVNPDDLQLGSTEKKLVQAYNEKPVLSRPQHTFYEGENYFEVDLDIHRFSY
IARKGLDSFRERLKNGILDMGLTIQAQKQSELPEQVLCCVRLNKIDFTNEGVPTIVAADD
K

Transcript Sequence

Transcript ID

EER92103
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:62090390:62094167:1 gene:SORBI_3001G332400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTTCAACTGCAAAATCTTTCTTCATCATACATACTGAACAAGAACCTTCCCTGAAGTTCA
GAGTGGCCTAATTATTTGTCCAGGAATATATTTGATATAATTAGAATAATTCCTATAACG
CAGAATTGCAACCTACCAACAAGCACATGATCCATAAACTAGTACACCAATCATGAACCT
AGAACACTATATAGCAGAGCAGCTGCAGGTTCCTCCAACGCCCCACCCTCTCCTTTGTAG
GTCTGCTTTTTTTTCAACACCATTTGCGTTTCTTGGATTCAATCTGGTAATTCTCCATTC
TTCTTATCCAGATTTCTTGGTACATTGCCCACACATTTGTTTGTCTAGTTGACGCAGAAG
CGGCAAGTATCTTCCATTTTCTATAAAAAAAAATGTCTGTCTAGCTGAGGATACCGTCTT
TGGTGCAGGCAAATCTTTCAAGCTCGCTTAAAGCATACATCAAACACAGCTTCTTGTGAT
TGCAGGTTAGGGTTTCATTTGTACCTCCACACCCTGTAGAGTCTGAAGGTGAATTACATT
AAAAGAGTACTGAAAAATACCAGAAACAGCAACCACACACAAGTATCCACCATGGGTTCC
TGTACTTCCAAGTCTGCCCTTGAGCATAGGAGGCCAGCAAGGTATTACACCAGAGGGCGA
AGAGTCCGCAGCCGTCGGTCCATCATGCCAGAGGCACCCCAGTCACAACAGTTGAGCGAT
CCCAGAGGACGCATGACCGGCTTCTCCATGAGCGAGATTGTCCATGTGGAGACGGCCAAC
AGAGGCAAGTCAGAGCATTCCAAGACATTCCACCTTACGCAGATGGAGTGGCACCACAGC
CAGAGGGACTCTAAAGGTTGCAGCAATGAAGATGCCTGGTTTGATTCTGTCAGTATCCTT
GAAGATGATTCTGATGATGAATTCAAGAGTGTCTATGGAGATAGTTCGGACGAAGATGAG
GAGCAGAAAAAGCAATATGAGAGCGCTTCCAGTTTTGCTGATGCACTCTCTCGCATTGGA
GACATGTGCCGTGGTGTGCCCATGACATTATCTGTTGAACAGTACCTGAAAAAAGATAAT
GGTGATGATCCTGGACGTAGGAGCCAAAGCATGACCGTGCGTACCAGCAAGTGTGTACCA
TCCTCCTTTAGCCTCAAGGGCTTGAAGGATAAAAATGATACAGATGATGATAACAAGGAG
AGCTCCACGCCATCCCGCTTACGCCAGCTGCTGCACTCTATCAGCTTCAATGACAAGATG
CAGCAGTTGACAGGTGGCAGCCCTGCAAAAAGGAAATCCACAGTCATCCGGCTCTCATAC
AAGACAACATCATGTGATGACTATGAAGACAGCGGTGAATGCGGTAAATCGAAGAAATTT
GTTGTCCGTCCAAAGGTAGGGCAAACAATCCCATATGGAGGAGAGAAGCCAACAACAGGA
TGTTGGTCACGGATTGATCCTTCCATCTTCAAGTTGAGGAGTGAGACCTTCCTAAAAGAT
AAGAAGAAATGTGCAGCTCCAAATTATGCTGCTTATTATCCAATAGGTGTTGACCTGTTT
GCCTGCCCCAAGAAGGTCCATCACATTGCTCAGCACCTCGACCTTCCACAAATCAAAACA
CACCCCAAGCTCCCATCACTTTTGATTGTGAACATCCAGATGCCTACCTATCCTGCTGCT
ATGTTCCTCGGTGACAGTGACGGAGAAGGCTTAAGCCTTGTCTTGTACTTTAGGGTATCT
GAATACTATGACAAAGAGGTTTCTGAACATTTCAAGGAATCCATCATGAGATTTTTTGAG
GATGAAACTGAGAAGGTAAAGGGGTTTACGTCAGAATCTACCATCAGTTACAGAGATCGA
CTGAAGATCATGGCTGGATTGGTCAACCCAGATGACCTCCAGTTGGGTTCTACAGAGAAG
AAGCTTGTCCAAGCATACAATGAGAAGCCAGTCCTCTCACGGCCCCAACATACTTTCTAT
GAGGGAGAGAACTACTTTGAGGTAGACCTTGACATACACCGGTTCAGCTACATTGCTAGG
AAGGGACTGGACTCATTCAGGGAACGCCTAAAGAATGGAATCCTCGATATGGGGTTAACA
ATTCAGGCCCAGAAGCAGTCGGAGCTCCCTGAGCAGGTCCTCTGCTGTGTTAGGCTGAAC
AAGATTGATTTCACTAACGAAGGAGTTCCAACAATAGTCGCAGCTGATGACAAGTGACAC
ATTTGATCATAGTCATCACATGTGCGAGCCAGTAATTGGAAAGCTAGATCCATTGAGTTC
AGATAAAAGGAAGCGAGAAAAAACTGATGGCTCCACATCTTAGTTACTGCTTAAAATGTT
CGACGTTCTGCCTACTTTTAAGCGCGGAAATTTTCTAACTGTAATAATGTATATATACAA
GCGGATACAACCCTTCGGGTGTTGGTCAAGATCCTAACCTTTTCCACTCCACTTGCTGGT
TGCAACATGCCTACTTCTAGATGCAGAAAAACACTGAACCTGACAAGATTCAAATGTCCA
TGCATCAGACAGCCTTGAACATTCATAATAAGATTCTGACAGAAATTGCGGGCGCGCCTG
TCAGGATGTTAAAACTTTGTAAGCTTTTGTTCCGGACCTTCCGGTAATAAAAGCAGAGGC
AACCTGTTTTTTTTATTTAAAAAAAGAGTAAAATAAAAGATTCAGACAGAAATCATGAGC
CATACCTGCTTTCTTAGACTCTTCACCGCCTGTTCTAGTTTTATGC