Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER92048
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:60994133:60997998:1 gene:SORBI_3001G322600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCGCGCTCCTGCCGGAGACGGCGCCACGGCTGCTGACGCCGGAGACGCTCCGC
ACGGCGGCGAAGCAGTCCCAGGGGATCCACCTCGTCCCCCTCTCCCTCCGCCGCGCCATC
AAGCGCTACCTCCGCGACCAGGACAAGGCGCACATGAACCGCAAGGTGCTGCTGCTCTCG
GCGTCCTTCGACCGCGCCAAGGGCACCGGCGCCGAGCTCGCCGCGGCCGCCACCCGCGGC
GCGCTCCTCGACGACCCCAACGCGCCGTCGGGCGCCGAGCAGCGGGCGGCGCGCTGGAAG
GTGCGGTCGGCCTACGGCGATATCGGCCTCCGGTACCGCGAGGACGAGACAGTTGCCTAC
GTCGCGTCACGCATGCCAGCCATCTACGCCGCGTGCCACCGCGTACTGCGCGAGGTTAGA
CGGAGGTTGCCAGATTTTGCGCCTGCCAAGGTGTTGGATTTTGGTGCCGGGCCAAGCTCA
GCCCTTTGGGCAATGAGGGCAGTGTGGCCAAAATCTATAGAGAGGGTTAACCTGGTCGAG
CCTTCCAAGGAAATGCAAAGAGCAGGGCAGAGTCTTCTTGACAATTTGAAGGGGTTGCCA
CTTATTCACAGCTATGACAGCATCCAAGAGTTGAACCGCAAAATAGAAAAACATGAGCGA
GGCCACGATCTTGTAGTATCATCTTATGCACTTGGCGAGATTCCTTCTTTGAGTGACCGA
ATCACAATAGTGCGCCAGCTTTGGGACCTGACAAGCGATGTTTTGGTTTTGTTAGAGCCT
GGAACACCTCAAGGAGCAAAGATCATAAGCCAAATGCGCTCTTATATCCTTTGGATGGAA
AAAAGAAAGTGTCGCAAAATTGAAAAATCCTCAAGCCGCCCTCCAAGTAGCATGAAGAGC
ATTGTTGCACAAGAAGCCTCATTGAAAAATGGGTCTTTTGTGGTTGCCCCTTGTCCTCAT
GATGGTCGATGTCCTTTGGAGAATTCAGACAAATACTGCCACTTTGTCCAGAGATTGGAG
AGGACATCATCTCAACGTGCCTACAAGAGGTCAAAAGGTGTGCCTTTACGTGGATTTGAG
GATGAAAAATTTTGCTATGTTGCTTTAAGAAGAGGCAAACGGCCAGAGGAAGCTTGGCCA
CTTGATGGCTTGAACTTTGAGACACTTAAAGAACGCCATGCCAAGAGAAAGCCAGAAGAA
CTTATCATCGACTATGACGATCAATTTCCAAGCGAGGAAGATGAAGAGGTTCCTGTCGAT
GGTGGGGACAGTCTGGTACCATATGCTTCAGATGAACACGAATTAAGTCTGTTCCATGAC
AGTGAAGAAGCAGAGGAGGAGGACCAAACGATTCGTGCTGACCTTGGAGGAGGTTGGGGC
CGCATTATATACAGCCCCATTCGAAGAGGGAGGCAAGTACAAATGGATGTATGCCGTTCC
ACCAAACGTGACGCATCCGAAGGCGCATTTGAGCGTGTAGTTCTCACCCGAAGCAAGAAC
CCAACTTTGCATTTTCAGGCCCGTAGGTCACTTTGGGGCGACCTCTGGCCATTCTAA

Peptide Sequence

PEP ID

EER92048
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:60994133:60997998:1 gene:SORBI_3001G322600 transcript:EER92048 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAALLPETAPRLLTPETLRTAAKQSQGIHLVPLSLRRAIKRYLRDQDKAHMNRKVLLLS
ASFDRAKGTGAELAAAATRGALLDDPNAPSGAEQRAARWKVRSAYGDIGLRYREDETVAY
VASRMPAIYAACHRVLREVRRRLPDFAPAKVLDFGAGPSSALWAMRAVWPKSIERVNLVE
PSKEMQRAGQSLLDNLKGLPLIHSYDSIQELNRKIEKHERGHDLVVSSYALGEIPSLSDR
ITIVRQLWDLTSDVLVLLEPGTPQGAKIISQMRSYILWMEKRKCRKIEKSSSRPPSSMKS
IVAQEASLKNGSFVVAPCPHDGRCPLENSDKYCHFVQRLERTSSQRAYKRSKGVPLRGFE
DEKFCYVALRRGKRPEEAWPLDGLNFETLKERHAKRKPEELIIDYDDQFPSEEDEEVPVD
GGDSLVPYASDEHELSLFHDSEEAEEEDQTIRADLGGGWGRIIYSPIRRGRQVQMDVCRS
TKRDASEGAFERVVLTRSKNPTLHFQARRSLWGDLWPF

Transcript Sequence

Transcript ID

EER92048
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:60994133:60997998:1 gene:SORBI_3001G322600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTGCCTGTGTGACTGCGTCCCCTCCTGAACCCTGTGTCACTCACGGAACCACGGTCCTAG
CGCCGCCGCGAGAGCCGAGACGAAACATGGCGGCCGCGCTCCTGCCGGAGACGGCGCCAC
GGCTGCTGACGCCGGAGACGCTCCGCACGGCGGCGAAGCAGTCCCAGGGGATCCACCTCG
TCCCCCTCTCCCTCCGCCGCGCCATCAAGCGCTACCTCCGCGACCAGGACAAGGCGCACA
TGAACCGCAAGGTGCTGCTGCTCTCGGCGTCCTTCGACCGCGCCAAGGGCACCGGCGCCG
AGCTCGCCGCGGCCGCCACCCGCGGCGCGCTCCTCGACGACCCCAACGCGCCGTCGGGCG
CCGAGCAGCGGGCGGCGCGCTGGAAGGTGCGGTCGGCCTACGGCGATATCGGCCTCCGGT
ACCGCGAGGACGAGACAGTTGCCTACGTCGCGTCACGCATGCCAGCCATCTACGCCGCGT
GCCACCGCGTACTGCGCGAGGTTAGACGGAGGTTGCCAGATTTTGCGCCTGCCAAGGTGT
TGGATTTTGGTGCCGGGCCAAGCTCAGCCCTTTGGGCAATGAGGGCAGTGTGGCCAAAAT
CTATAGAGAGGGTTAACCTGGTCGAGCCTTCCAAGGAAATGCAAAGAGCAGGGCAGAGTC
TTCTTGACAATTTGAAGGGGTTGCCACTTATTCACAGCTATGACAGCATCCAAGAGTTGA
ACCGCAAAATAGAAAAACATGAGCGAGGCCACGATCTTGTAGTATCATCTTATGCACTTG
GCGAGATTCCTTCTTTGAGTGACCGAATCACAATAGTGCGCCAGCTTTGGGACCTGACAA
GCGATGTTTTGGTTTTGTTAGAGCCTGGAACACCTCAAGGAGCAAAGATCATAAGCCAAA
TGCGCTCTTATATCCTTTGGATGGAAAAAAGAAAGTGTCGCAAAATTGAAAAATCCTCAA
GCCGCCCTCCAAGTAGCATGAAGAGCATTGTTGCACAAGAAGCCTCATTGAAAAATGGGT
CTTTTGTGGTTGCCCCTTGTCCTCATGATGGTCGATGTCCTTTGGAGAATTCAGACAAAT
ACTGCCACTTTGTCCAGAGATTGGAGAGGACATCATCTCAACGTGCCTACAAGAGGTCAA
AAGGTGTGCCTTTACGTGGATTTGAGGATGAAAAATTTTGCTATGTTGCTTTAAGAAGAG
GCAAACGGCCAGAGGAAGCTTGGCCACTTGATGGCTTGAACTTTGAGACACTTAAAGAAC
GCCATGCCAAGAGAAAGCCAGAAGAACTTATCATCGACTATGACGATCAATTTCCAAGCG
AGGAAGATGAAGAGGTTCCTGTCGATGGTGGGGACAGTCTGGTACCATATGCTTCAGATG
AACACGAATTAAGTCTGTTCCATGACAGTGAAGAAGCAGAGGAGGAGGACCAAACGATTC
GTGCTGACCTTGGAGGAGGTTGGGGCCGCATTATATACAGCCCCATTCGAAGAGGGAGGC
AAGTACAAATGGATGTATGCCGTTCCACCAAACGTGACGCATCCGAAGGCGCATTTGAGC
GTGTAGTTCTCACCCGAAGCAAGAACCCAACTTTGCATTTTCAGGCCCGTAGGTCACTTT
GGGGCGACCTCTGGCCATTCTAAACGGTAGAATCCTCGAGCTTGGTTAAAGCCATAATAT
TGTTATGGGGCTCTGAAACTGTTCAGCGTTGGACTCGGTAGGTGAAAACCTCGATGCGAC
TTAAGTGAATGTTGTGCCAGAATTGATCTCAGCGTCTCTAGCAGATGTATATTGTTGAAA
AAAAATCTCTTTTCCATCTATGGGCATGACAGTATGGACTAGAAAGGATGTGCCAGAATT
CTGACTTGAGAGCTTGGGCAAGCTACTTCATGGCACTACCACTAATGAAGAGTTCGACCA
GCATTGTAATGAGTAATACCAG