Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER92006
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:59965707:59970759:1 gene:SORBI_3001G312600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGCGGCGACGGGGACGGCACGAGGGCGCTGGACCAGACGCCGACGTGGGCCGTGGCC
GCCGTCTGCGCTGTCATCGTCGCGGCATCCATCCTCCTCGAGGGCCTCCTCCACCACCTC
GGCCAGTTGCTCAACAAGAAGCGGAAGATAGCGCTGTTCGACGCTCTGGAGAAGGTTAAA
TCCGAGCTGATGACTCTGGGGTTCATATCGCTGCTGCTGACCGTGACGGGGAGGTACATA
GCGCACATCTGCATCCCGGAGGGAGCCGCCAACACCATGCTGCCCTGCCGCCGTCAGTCC
GGCCACTCGGAGGCGGAGGAGCCCGAGGACCATGGCCGACGGCACCTGTCTGAAGATCCC
ACCAACCTTTTTTCCTGCCCCAAAGGCATGGTGTCGCTTGTTTCAGCCGACGGCATGCAT
CAGCTGCACATTTTCGTCTTCTTCTTGGCCGTCTTCCATGTTACCTTCAGTTTCTTCACA
ATGTCCCTGGGTAGAGCAAAGACTCGTATATGGAAGGTGTGGGAAAAGGAAACTTGCTCC
CCTGAGTATAATTATTTAAATGACCCCTCAAAGTTCAGGCTCACGCACCAAACATCTTTT
GTGAGGCAACATGCAAGCTGTTGGAGCAAAAGCACAATCACTCTCTATTTTGTGAGCTTC
TTTAGGCAGTTCTTCCGATCTGTTCGGAGGACAGACTACCTTACTTTACGACATGGATTC
ATTTCTGCTCATTTATCTCCGGGGACTAGGTTCAATTTTCGAAAGTACATTAAAAGGTCC
TTGGAGGATGATTTTAAGACAGTTGTTGGCATTAGTCCACCGTTATGGGCTTCTGCTTTG
GCTGTCATGCTCTTCAATGTTCATGGATGGCACAACTTATTCTGGTTCTCTACAATTCCC
CTTGTAGTGATTCTAGCAGTTGGAACAAAGCTGCAGGCTATAATTGCTATGATGGCTATT
GAAATTACAGAGAGGCATACAGTTATTCAAGGCATGCCAGTGGTAAAACTGAGTGATGAT
CATTTCTGGTTCGGGAAGCCTCGTTTGGTTCTCCACCTCATCCATTTCGCATCATTTCAG
AATGCATTTGAAATTACATATTTCTTTTGGATTTGGTACGAATTTGGCCTGAGGTCCTGC
TTCCATGACAACTTTGAGCTTATCATTGCAAGAGTCTGCCTTGGAGCTATCGTCCAATTT
ATGTGCAGCTATATCACCCTTCCACTCTATGCCCTTGTGTCTCAGATGGGTTCACAAATG
AAGAGAACAATTTTCGACGAGCAGACAGCAAAGGCCCTGAAGAAATGGCACAAGGCCGTG
GTGAAGAAGAAGCACCACAACAAGGGTTCATCTCACGACTCCTCCGAGACCCCTAGCACG
GACACAGCAACACCGGCGAGGGAGGCGGGCGAGTGGCAGCGGCTGCACGACGTGCCGGTC
CGGCACCTCCACCGGTACAAGACCATCGCGCACGTCGGCGGCGCGAGGAGCCCGCTGTCG
GACTCGGACTACAGCGACACGGACGACACCGAGCCGCTGTCGTCGTCGCAGACGAGGCAC
CTGATACCGCCGGCGAAGCAGCGGAGCCTCGACACCGAGCGCGCGGAGGTGCGCGTGGAC
GTCGTAGAGACGGTGGCGGCGGTGGCGCCACGCGACGTCCTGCAAGACAGCTTCTCGTTT
CCAAGGCTGCTTCCCCCTCGCCATGTGCCGGACAAGTGA

Peptide Sequence

PEP ID

EER92006
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:59965707:59970759:1 gene:SORBI_3001G312600 transcript:EER92006 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGGDGDGTRALDQTPTWAVAAVCAVIVAASILLEGLLHHLGQLLNKKRKIALFDALEKVK
SELMTLGFISLLLTVTGRYIAHICIPEGAANTMLPCRRQSGHSEAEEPEDHGRRHLSEDP
TNLFSCPKGMVSLVSADGMHQLHIFVFFLAVFHVTFSFFTMSLGRAKTRIWKVWEKETCS
PEYNYLNDPSKFRLTHQTSFVRQHASCWSKSTITLYFVSFFRQFFRSVRRTDYLTLRHGF
ISAHLSPGTRFNFRKYIKRSLEDDFKTVVGISPPLWASALAVMLFNVHGWHNLFWFSTIP
LVVILAVGTKLQAIIAMMAIEITERHTVIQGMPVVKLSDDHFWFGKPRLVLHLIHFASFQ
NAFEITYFFWIWYEFGLRSCFHDNFELIIARVCLGAIVQFMCSYITLPLYALVSQMGSQM
KRTIFDEQTAKALKKWHKAVVKKKHHNKGSSHDSSETPSTDTATPAREAGEWQRLHDVPV
RHLHRYKTIAHVGGARSPLSDSDYSDTDDTEPLSSSQTRHLIPPAKQRSLDTERAEVRVD
VVETVAAVAPRDVLQDSFSFPRLLPPRHVPDK

Transcript Sequence

Transcript ID

EER92006
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:59965707:59970759:1 gene:SORBI_3001G312600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTGCTCTATTTAAAATAGACGCGCACCTACACCTGGTTCTGCGCAAGCACGCGGCGGCAC
CGCCAAGCAATCGTCTCATCTGCTCCACCTCCACCCCATTTAACGCACTCTCCCCAGCCT
CCACTCTCCGCTCCCTCCTTCGCGGCGGCACGGCAGAGGCCATTAACGCCGCTGCGGCGA
GCGCCGAGAGGAAATGGGCGGCGACGGGGACGGCACGAGGGCGCTGGACCAGACGCCGAC
GTGGGCCGTGGCCGCCGTCTGCGCTGTCATCGTCGCGGCATCCATCCTCCTCGAGGGCCT
CCTCCACCACCTCGGCCAGTTGCTCAACAAGAAGCGGAAGATAGCGCTGTTCGACGCTCT
GGAGAAGGTTAAATCCGAGCTGATGACTCTGGGGTTCATATCGCTGCTGCTGACCGTGAC
GGGGAGGTACATAGCGCACATCTGCATCCCGGAGGGAGCCGCCAACACCATGCTGCCCTG
CCGCCGTCAGTCCGGCCACTCGGAGGCGGAGGAGCCCGAGGACCATGGCCGACGGCACCT
GTCTGAAGATCCCACCAACCTTTTTTCCTGCCCCAAAGGCATGGTGTCGCTTGTTTCAGC
CGACGGCATGCATCAGCTGCACATTTTCGTCTTCTTCTTGGCCGTCTTCCATGTTACCTT
CAGTTTCTTCACAATGTCCCTGGGTAGAGCAAAGACTCGTATATGGAAGGTGTGGGAAAA
GGAAACTTGCTCCCCTGAGTATAATTATTTAAATGACCCCTCAAAGTTCAGGCTCACGCA
CCAAACATCTTTTGTGAGGCAACATGCAAGCTGTTGGAGCAAAAGCACAATCACTCTCTA
TTTTGTGAGCTTCTTTAGGCAGTTCTTCCGATCTGTTCGGAGGACAGACTACCTTACTTT
ACGACATGGATTCATTTCTGCTCATTTATCTCCGGGGACTAGGTTCAATTTTCGAAAGTA
CATTAAAAGGTCCTTGGAGGATGATTTTAAGACAGTTGTTGGCATTAGTCCACCGTTATG
GGCTTCTGCTTTGGCTGTCATGCTCTTCAATGTTCATGGATGGCACAACTTATTCTGGTT
CTCTACAATTCCCCTTGTAGTGATTCTAGCAGTTGGAACAAAGCTGCAGGCTATAATTGC
TATGATGGCTATTGAAATTACAGAGAGGCATACAGTTATTCAAGGCATGCCAGTGGTAAA
ACTGAGTGATGATCATTTCTGGTTCGGGAAGCCTCGTTTGGTTCTCCACCTCATCCATTT
CGCATCATTTCAGAATGCATTTGAAATTACATATTTCTTTTGGATTTGGTACGAATTTGG
CCTGAGGTCCTGCTTCCATGACAACTTTGAGCTTATCATTGCAAGAGTCTGCCTTGGAGC
TATCGTCCAATTTATGTGCAGCTATATCACCCTTCCACTCTATGCCCTTGTGTCTCAGAT
GGGTTCACAAATGAAGAGAACAATTTTCGACGAGCAGACAGCAAAGGCCCTGAAGAAATG
GCACAAGGCCGTGGTGAAGAAGAAGCACCACAACAAGGGTTCATCTCACGACTCCTCCGA
GACCCCTAGCACGGACACAGCAACACCGGCGAGGGAGGCGGGCGAGTGGCAGCGGCTGCA
CGACGTGCCGGTCCGGCACCTCCACCGGTACAAGACCATCGCGCACGTCGGCGGCGCGAG
GAGCCCGCTGTCGGACTCGGACTACAGCGACACGGACGACACCGAGCCGCTGTCGTCGTC
GCAGACGAGGCACCTGATACCGCCGGCGAAGCAGCGGAGCCTCGACACCGAGCGCGCGGA
GGTGCGCGTGGACGTCGTAGAGACGGTGGCGGCGGTGGCGCCACGCGACGTCCTGCAAGA
CAGCTTCTCGTTTCCAAGGCTGCTTCCCCCTCGCCATGTGCCGGACAAGTGAAGTGAACA
CCGGCCTGCTTAGAACTAAGACTGTCTTATATATAGGGATAATTCAATAGTAGTTTCAAA
GTATAAGTGCTTTTGGTTTTTCTGTGCTACGTCTATGTAGCAAAGGTTATGAATTTAGAA
AAGCCAAAAGGATTTATTAGTTTGAAATGGAGTAATAATAATAGTATAGTAGACTAGTAG
TCGAAGCTAACCTACATGAGAGATAGTGTTTTCTAGTCGATTTTTAGATGATCGTAATCC
AGATTCTTAGTATAGGTGCCTGTAAGTGATGTCTGGATTGATGAGTGTTGAGTGGGAATG
TTTCTTTTTCGGGCTAATTTTCTTGGACGCTAAGTGATTGCACGGGACAGTAAAGCCGAG
TGAAATCGGTGGAGCCTTCACTTAGAGGGCACTTTTGCTGCACTGCACGCCTGTACCTTC
AAACTGAGCAATGATACTGATAGGCAGAGGAGCTGAATAAGAAGCTAAGGTGATACTGCT
GCTGCTAATCATCCAGTGGAACACGAACCTTGGCATGAAATTATTGTACCAGTAATGA