Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER91898
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:56862598:56867224:1 gene:SORBI_3001G291800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCTGGCAATCTCCATGGAGGGCATCGATGCGCGGGCGCGGGAGCTCGGGGTGGAC
CTCTCCGCTGTCGATCTGGACTCCATCACCCTCCCGGCCGGCGAGGACTTCGGCATCCTC
AGTGATGATGAGGAGGTACTTCGTAGTGAGGATCCTCCAGAACTTGAAATGGGTTTATCC
AACATTATTGTCGTGGACAACCTGCCAGTTGTTCCTCCAGAAAAGTTTGAGAAGCTTGAG
AATGTCATACGCAAGATCTACAGCCAAATTGGTGTGATAAAAGAAAATGGTCTATGGATG
CCTGTAAACTCAGAGACAAAGAAGACATATGGCTACTGTTTCATTGAGTATAATACCCCT
CAGGAAGCTGAGCTGGCTAGGGAAAAAACCAATGGGTACAAACTCGACAAGTCTCACATC
TTCGCAGTTAATTTGCTTGATGATTTCGAGAAGTACATGAAAGTTCCTGACACATGGACC
CCCGCTGAAATTAAGCCATACACTGCCGGAGAAAATCTTCTGAAGTGGCTAACTGATGAA
AAGGCCCGAGACCAATTTGTCATTCGTGCTGGCACACTAACTGAAGTTTATTGGAATGAT
GCAAGAAAGCTAGCACCTGAGCTTGTGTTTCAAAAGCAGTACTGGACAGACAGTTTCATC
CAGTGGTCCCCTCTGGGAACGTACTTGGCAACGGTTCATAGGCAGGGATCACAGGTGTGG
GGTGGTGAAAATGGCTTCGAGCGTTTGATGCGTTTTGCTCATCCCATGGTGAAACTGATT
GACTTCTCTCCTGGCGAGAGATATTTGGTCACATACAGCAGCCATGAGCCCAGCAACCCT
AGAGACACACATAGGGTTGTCCTGAATATCTTTGATGTAAGGACTGGGAAGGTTATGCGA
GACTTTAAGGGAAGCGCCGATGATTATACTACTGGTGGGAATATTGGGGTTTCTGGTGTT
TCATGGCCTATTTTCAGGTGGGGTGGTGGAAAGGACGACAAATATTTTGCAAGGCTTGGG
AAGAATATAATATCTGTCTATGAAACCAATACATTCTCCCTTCTTGATAAAAAGTCTTTG
AAGGTAGAAAATGTAGTGGACTTCAGCTGGTCTCCCACTGATCCTATCATCTCTCTGTTC
GTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGGGTGAGTCTAGTGCAAATCCCTGGC
AAAGAGGAGCTGCGACAGAAAAATCTTTTCAGTGTCAGTGATTGCAAAATGTATTGGCAG
AACAGTGGAGAATATCTTGCTGTTCAAGTTGATAGATACACAAAAACAAAAAAGAGCACC
TACACTGGGTTTGAGCTGTTTAGAATTAAGGAGAGGGATATCCCAATTGAGGTCCTTGAA
CTTGAGAACAAGAATGACAAGATCATTGCATTTGCATGGGAACCTAAAGGACATCGCTTT
GCTATCATTCATGGTGATGGCCCTAGGCCTGACGTTAGCTTCTACACCATGCGAACAGCA
AATAACACTAACCGTGTGTCCAAGCTCACAACACTCAAGGCCAAGCAAGCTAATGCTTTG
TACTGGTCTCCTGCTGGGCGCTTCATTGTTCTTGCTGGACTGAAGGGTTTCAACGGACAG
CTGGAATTCTACAATGTTGATGAACTAGAGACAATGGCAACAGGAGAGCATTTTATGGCA
ACGGATATTATGTGGGATCCAACTGGGAGATATCTCGCGACTGCAGTTACCTCAGTTCAT
GAAATGGAGAATGGCTTTCAAATATGGTCCTTTAATGGCAAGCATCTTTACAAGGTGTCA
AAGGATCATTTCTATCAGTTCATATGGCGCCCGAGACCACCCTCACTGCTAAGCCCTGAG
AAGGAAGAAGAGATCTCAAGGAACCTGAAGAAGTACAGCAAAAAGTACGAACAAGAGGAC
CAGGACGCGTTCAACCAGTTGAGCGAGCAGGACCGGAAGAGGCGGACACAGCTTCAGGAA
GAATGGGACTCATGGGTTGCCAAGTGGAAGCAGATGCATGAGGAGGAGCGTGCTTTCAGG
ATGGAGCTCAGGGATGGGGAAGCCAGTGACGAGGAGGAAGAGTACGAGGCCAAGGAAGTT
GAGGTAGAGGAAGTTGTTGATGTCCGTCAGGAAGTTCTTGCATTCGACCTAGATCAGGAG
TGA

Peptide Sequence

PEP ID

EER91898
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:56862598:56867224:1 gene:SORBI_3001G291800 transcript:EER91898 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALAISMEGIDARARELGVDLSAVDLDSITLPAGEDFGILSDDEEVLRSEDPPELEMGLS
NIIVVDNLPVVPPEKFEKLENVIRKIYSQIGVIKENGLWMPVNSETKKTYGYCFIEYNTP
QEAELAREKTNGYKLDKSHIFAVNLLDDFEKYMKVPDTWTPAEIKPYTAGENLLKWLTDE
KARDQFVIRAGTLTEVYWNDARKLAPELVFQKQYWTDSFIQWSPLGTYLATVHRQGSQVW
GGENGFERLMRFAHPMVKLIDFSPGERYLVTYSSHEPSNPRDTHRVVLNIFDVRTGKVMR
DFKGSADDYTTGGNIGVSGVSWPIFRWGGGKDDKYFARLGKNIISVYETNTFSLLDKKSL
KVENVVDFSWSPTDPIISLFVPEMGGGNQPARVSLVQIPGKEELRQKNLFSVSDCKMYWQ
NSGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRF
AIIHGDGPRPDVSFYTMRTANNTNRVSKLTTLKAKQANALYWSPAGRFIVLAGLKGFNGQ
LEFYNVDELETMATGEHFMATDIMWDPTGRYLATAVTSVHEMENGFQIWSFNGKHLYKVS
KDHFYQFIWRPRPPSLLSPEKEEEISRNLKKYSKKYEQEDQDAFNQLSEQDRKRRTQLQE
EWDSWVAKWKQMHEEERAFRMELRDGEASDEEEEYEAKEVEVEEVVDVRQEVLAFDLDQE

Transcript Sequence

Transcript ID

EER91898
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:56862598:56867224:1 gene:SORBI_3001G291800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGTTGGGATCATAAGAAGAAGAGTCTCGCCTCGCAGCTCCAACCAAAACCCCAGCTCCAT
CCATCCCACTCCCACCCCGCGCCGCCGCACTCCTCTACACACGCGCCGCCGCCGCCACCG
CCACCACCACCACAGCGCGCAGGAATCCCTGCCTAATCCCTCGTTCTCGCAGACGGTTCC
AGCCGTTCTATGTAAGAGAAGATGGCGCTGGCAATCTCCATGGAGGGCATCGATGCGCGG
GCGCGGGAGCTCGGGGTGGACCTCTCCGCTGTCGATCTGGACTCCATCACCCTCCCGGCC
GGCGAGGACTTCGGCATCCTCAGTGATGATGAGGAGGTACTTCGTAGTGAGGATCCTCCA
GAACTTGAAATGGGTTTATCCAACATTATTGTCGTGGACAACCTGCCAGTTGTTCCTCCA
GAAAAGTTTGAGAAGCTTGAGAATGTCATACGCAAGATCTACAGCCAAATTGGTGTGATA
AAAGAAAATGGTCTATGGATGCCTGTAAACTCAGAGACAAAGAAGACATATGGCTACTGT
TTCATTGAGTATAATACCCCTCAGGAAGCTGAGCTGGCTAGGGAAAAAACCAATGGGTAC
AAACTCGACAAGTCTCACATCTTCGCAGTTAATTTGCTTGATGATTTCGAGAAGTACATG
AAAGTTCCTGACACATGGACCCCCGCTGAAATTAAGCCATACACTGCCGGAGAAAATCTT
CTGAAGTGGCTAACTGATGAAAAGGCCCGAGACCAATTTGTCATTCGTGCTGGCACACTA
ACTGAAGTTTATTGGAATGATGCAAGAAAGCTAGCACCTGAGCTTGTGTTTCAAAAGCAG
TACTGGACAGACAGTTTCATCCAGTGGTCCCCTCTGGGAACGTACTTGGCAACGGTTCAT
AGGCAGGGATCACAGGTGTGGGGTGGTGAAAATGGCTTCGAGCGTTTGATGCGTTTTGCT
CATCCCATGGTGAAACTGATTGACTTCTCTCCTGGCGAGAGATATTTGGTCACATACAGC
AGCCATGAGCCCAGCAACCCTAGAGACACACATAGGGTTGTCCTGAATATCTTTGATGTA
AGGACTGGGAAGGTTATGCGAGACTTTAAGGGAAGCGCCGATGATTATACTACTGGTGGG
AATATTGGGGTTTCTGGTGTTTCATGGCCTATTTTCAGGTGGGGTGGTGGAAAGGACGAC
AAATATTTTGCAAGGCTTGGGAAGAATATAATATCTGTCTATGAAACCAATACATTCTCC
CTTCTTGATAAAAAGTCTTTGAAGGTAGAAAATGTAGTGGACTTCAGCTGGTCTCCCACT
GATCCTATCATCTCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGGGTG
AGTCTAGTGCAAATCCCTGGCAAAGAGGAGCTGCGACAGAAAAATCTTTTCAGTGTCAGT
GATTGCAAAATGTATTGGCAGAACAGTGGAGAATATCTTGCTGTTCAAGTTGATAGATAC
ACAAAAACAAAAAAGAGCACCTACACTGGGTTTGAGCTGTTTAGAATTAAGGAGAGGGAT
ATCCCAATTGAGGTCCTTGAACTTGAGAACAAGAATGACAAGATCATTGCATTTGCATGG
GAACCTAAAGGACATCGCTTTGCTATCATTCATGGTGATGGCCCTAGGCCTGACGTTAGC
TTCTACACCATGCGAACAGCAAATAACACTAACCGTGTGTCCAAGCTCACAACACTCAAG
GCCAAGCAAGCTAATGCTTTGTACTGGTCTCCTGCTGGGCGCTTCATTGTTCTTGCTGGA
CTGAAGGGTTTCAACGGACAGCTGGAATTCTACAATGTTGATGAACTAGAGACAATGGCA
ACAGGAGAGCATTTTATGGCAACGGATATTATGTGGGATCCAACTGGGAGATATCTCGCG
ACTGCAGTTACCTCAGTTCATGAAATGGAGAATGGCTTTCAAATATGGTCCTTTAATGGC
AAGCATCTTTACAAGGTGTCAAAGGATCATTTCTATCAGTTCATATGGCGCCCGAGACCA
CCCTCACTGCTAAGCCCTGAGAAGGAAGAAGAGATCTCAAGGAACCTGAAGAAGTACAGC
AAAAAGTACGAACAAGAGGACCAGGACGCGTTCAACCAGTTGAGCGAGCAGGACCGGAAG
AGGCGGACACAGCTTCAGGAAGAATGGGACTCATGGGTTGCCAAGTGGAAGCAGATGCAT
GAGGAGGAGCGTGCTTTCAGGATGGAGCTCAGGGATGGGGAAGCCAGTGACGAGGAGGAA
GAGTACGAGGCCAAGGAAGTTGAGGTAGAGGAAGTTGTTGATGTCCGTCAGGAAGTTCTT
GCATTCGACCTAGATCAGGAGTGAAAAGGCTTGTGATAGAATCTGGTTCTTTTTGTCGTG
TTAAAGTTCACTAGGGTTGCATTGCACAATAGGCTCTAGTGATCAAGTGCACAATTTGCT
GATCATTTTTCTGTTTTGTACACTTCTGCTTGAATTGTCGGATCATGTATTCAGATATCA
AATTTTGCTGCTGGATTACTAATCTGTCTGGTTCTGCAAAATTGAGACACTGCATTGACC
ATCCAACTTCCACTTTC