Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER91398
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:18056246:18064194:1 gene:SORBI_3001G199500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCGGCGCCGGAGCCTGAGGATGGGAGGGAGCTCTACGCGCTGCTCCACCTCTCC
CCGGACGCCTCCGGCGAGGAAATCCGCAGGGCGTACCGCCAGTTCGCGCAAATCTACCAC
CCCGACAAGTACCAAGACACGCAGATGAAGGAAGTAGCAACTGAAAACTTCCAACGAATA
CGTGATGCGTATGAGATACTATCGGATGAGAACAAAAGACAGATTTATGACATCTATGGT
ATGGAAGGTTTAAATTCTGGCCTGGAACTTGGTCCCAAGCTAACTAAACCAGAGGAAATC
AAAGAACAGTTGGAACGACTGCGGCGACGCAAGGAGGAAGAAAAACTTTTCACACATGCT
CTACCGAATGGCTCAATCATTGCTAATTTTTCAGTGCCACATTATTTAAATGGTGGGGGC
ATCATGAGAGGAATGGCGATGTCTAGTGAAGTTGAGTTGCCAGTGTCCAAGCAAAATACT
GTCGTTGTTGGTGGGAATTTGGCTGTAAATGGCTCAGCTGGATCTGGAGCAGCAAGCACT
GTGCTGCGACACCAGCTGTCTCCCGTTTCCTCTATCGAGTTTATGGCCACAGCTGGACTA
CGTTCTGTTATTGGCACACAGATGTCTCGTCAAATTTCACCACATTCTACAGCAACATCT
GGACTTGCTGTTTCTTTGAGAGATGGGTCTATCAACTTGTCAAATGCCTGGACTCGCCAA
TTATCTGACAATGCTGTTGGAAATATACAGCTTGTCCTTGGTGATGAATCAAGTATTTCT
GTTGGATGGCAAAAGAAGGATGAAAAAAGTACTGCAACTGGAGAAGTAAAGTTTGGAACT
AATTTTTTTGGTGCATCTGCTCATTACACGCATCGCTTCTCCTCCAAATCTCATGCACGC
GTTGCTGGTAGAGTTGGAAGCACGGCCCTTGATTTTGAAATTGGAGGAGGGAGGCGAATA
TCAGAATTTAGTACTATAAGGATGATGTATAACATAGGAATTCAGGGTGTCTCTTGGAGG
TTTGAGTTACATCGTGCTGGTCAAAAGTTAATTATCCCAGTCTTGCTTTCGGCTGATTTA
AATGCATTATTTGTTACCAGTGCATTTGCTATTCCTTCAACACTGTATTTTCTACTTCAG
ACATATGTTGTAAAGCCTTACTACCTTAAGCGAGAAAAGCAGAAAACACTAGAAAAGATG
GAAGGCTTATCTGCACAGCTAACTGAAGCCAGAAAGGCAGCTGAAAAGGCTCAAAAATTA
CTGGAACCTGTCTCCAATCGTAAGAAGAATAGACAGCTAGAGAACAATGGATTGGTGATA
ACAAAGGCTCTGTATGGCAGTTGCAAAAAAATCAAAGAGAGCAGTGAATTGAATGAGATA
CATAGTGACATGGCTTCACAAGTATTTGATGTGACCATCCCACTGAACTTCCTCGTTACT
GATGCAGGCCAGCTCAAGCTTCATGACGGGATAAAGAAGTCTGGAATAATGGGTTTCTAC
GATCCTTGTCCTGGAGAGCCGAAGCTGTTACTTGTCGAGTACACGTTTCATGGTCGTAAA
TACAAGGTCATGGTGGATGACTATGAGGCGCTGTTGATACCACAAGATATCCATCAATTT
TGA

Peptide Sequence

PEP ID

EER91398
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:18056246:18064194:1 gene:SORBI_3001G199500 transcript:EER91398 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASAPEPEDGRELYALLHLSPDASGEEIRRAYRQFAQIYHPDKYQDTQMKEVATENFQRI
RDAYEILSDENKRQIYDIYGMEGLNSGLELGPKLTKPEEIKEQLERLRRRKEEEKLFTHA
LPNGSIIANFSVPHYLNGGGIMRGMAMSSEVELPVSKQNTVVVGGNLAVNGSAGSGAAST
VLRHQLSPVSSIEFMATAGLRSVIGTQMSRQISPHSTATSGLAVSLRDGSINLSNAWTRQ
LSDNAVGNIQLVLGDESSISVGWQKKDEKSTATGEVKFGTNFFGASAHYTHRFSSKSHAR
VAGRVGSTALDFEIGGGRRISEFSTIRMMYNIGIQGVSWRFELHRAGQKLIIPVLLSADL
NALFVTSAFAIPSTLYFLLQTYVVKPYYLKREKQKTLEKMEGLSAQLTEARKAAEKAQKL
LEPVSNRKKNRQLENNGLVITKALYGSCKKIKESSELNEIHSDMASQVFDVTIPLNFLVT
DAGQLKLHDGIKKSGIMGFYDPCPGEPKLLLVEYTFHGRKYKVMVDDYEALLIPQDIHQF

Transcript Sequence

Transcript ID

EER91398
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:18056246:18064194:1 gene:SORBI_3001G199500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGCGCGGCGCCGGGACGGACAACGGACGGGGGGCGGTGGATTCCGTTTTTACTACCGCAT
CAACCACCTGCACCTACAATCACTAGCGGTCTCCATCCATCCATTCCACAGGAAGATGGA
TCACCGATCTGAATGGGATGACGAACGCCGGAACGTGTAGCTCCGGCCTCCGGCGAGTGG
CGGACCCATGGCGAGCGAGAAGCTGTCTGTGTGCCGGTTCGTTTGCCGAACCCGCGGTAG
ACCGGCGCGTATTCATTTCTGGATCCAACGGTCGTTTGCTCTGTGAGTCTGTGATCCGTG
TGGGTTTCGTATCTGAAAAATTATAAGTATTATATAGCTGCACCAACCCAGACGTATTCA
CCAGATTTTTTTGTTGGTCCAGAGCCCCAAACCAGTGGATGGCCGGCCCATGAATGCGCG
CATTTTCTTGCAAACGACGGTAGGCAAACCAAACTACGAAAGGCTTGCTGCAGAAGTTGA
AGAGTATCATTATTACAAACAAGGTTAAAAAAACTAATAAAAAAAGAAAAGAAAAAGAAT
TCCGCATAAACCCTCCCAGCCAAAAACACCCAGTCCCCTCCACCCCCGCCGAGGCCGCCG
AGCGAGCAGCAAGCCGCAGAGCGGCGCTCTAGCTTCGCCACTGAGAGCGGGATGGCGTCG
GCGCCGGAGCCTGAGGATGGGAGGGAGCTCTACGCGCTGCTCCACCTCTCCCCGGACGCC
TCCGGCGAGGAAATCCGCAGGGCGTACCGCCAGTTCGCGCAAATCTACCACCCCGACAAG
TACCAAGACACGCAGATGAAGGAAGTAGCAACTGAAAACTTCCAACGAATACGTGATGCG
TATGAGATACTATCGGATGAGAACAAAAGACAGATTTATGACATCTATGGTATGGAAGGT
TTAAATTCTGGCCTGGAACTTGGTCCCAAGCTAACTAAACCAGAGGAAATCAAAGAACAG
TTGGAACGACTGCGGCGACGCAAGGAGGAAGAAAAACTTTTCACACATGCTCTACCGAAT
GGCTCAATCATTGCTAATTTTTCAGTGCCACATTATTTAAATGGTGGGGGCATCATGAGA
GGAATGGCGATGTCTAGTGAAGTTGAGTTGCCAGTGTCCAAGCAAAATACTGTCGTTGTT
GGTGGGAATTTGGCTGTAAATGGCTCAGCTGGATCTGGAGCAGCAAGCACTGTGCTGCGA
CACCAGCTGTCTCCCGTTTCCTCTATCGAGTTTATGGCCACAGCTGGACTACGTTCTGTT
ATTGGCACACAGATGTCTCGTCAAATTTCACCACATTCTACAGCAACATCTGGACTTGCT
GTTTCTTTGAGAGATGGGTCTATCAACTTGTCAAATGCCTGGACTCGCCAATTATCTGAC
AATGCTGTTGGAAATATACAGCTTGTCCTTGGTGATGAATCAAGTATTTCTGTTGGATGG
CAAAAGAAGGATGAAAAAAGTACTGCAACTGGAGAAGTAAAGTTTGGAACTAATTTTTTT
GGTGCATCTGCTCATTACACGCATCGCTTCTCCTCCAAATCTCATGCACGCGTTGCTGGT
AGAGTTGGAAGCACGGCCCTTGATTTTGAAATTGGAGGAGGGAGGCGAATATCAGAATTT
AGTACTATAAGGATGATGTATAACATAGGAATTCAGGGTGTCTCTTGGAGGTTTGAGTTA
CATCGTGCTGGTCAAAAGTTAATTATCCCAGTCTTGCTTTCGGCTGATTTAAATGCATTA
TTTGTTACCAGTGCATTTGCTATTCCTTCAACACTGTATTTTCTACTTCAGACATATGTT
GTAAAGCCTTACTACCTTAAGCGAGAAAAGCAGAAAACACTAGAAAAGATGGAAGGCTTA
TCTGCACAGCTAACTGAAGCCAGAAAGGCAGCTGAAAAGGCTCAAAAATTACTGGAACCT
GTCTCCAATCGTAAGAAGAATAGACAGCTAGAGAACAATGGATTGGTGATAACAAAGGCT
CTGTATGGCAGTTGCAAAAAAATCAAAGAGAGCAGTGAATTGAATGAGATACATAGTGAC
ATGGCTTCACAAGTATTTGATGTGACCATCCCACTGAACTTCCTCGTTACTGATGCAGGC
CAGCTCAAGCTTCATGACGGGATAAAGAAGTCTGGAATAATGGGTTTCTACGATCCTTGT
CCTGGAGAGCCGAAGCTGTTACTTGTCGAGTACACGTTTCATGGTCGTAAATACAAGGTC
ATGGTGGATGACTATGAGGCGCTGTTGATACCACAAGATATCCATCAATTTTGAGCGGTT
CCTGATGTAAAGCTGCATCAAAACGATTTTGTGTCACCATAGCTGATAGTTTTCTTCTCA
TTTTTTCTTTGTGTTGATGAGCTATCTATGTTTTCGGTTATTCCTTTATGCGCCCCGAAT
GTTGTATACGCATGTGGATTTGCGGCAACTCGAGGGCATACACACCCACAGCAGTTAATA
ATTTTCAGTCATTTTTCA