Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER91182
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:12784396:12789912:1 gene:SORBI_3001G157800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGGCAACCGCCGTGGCCCCGACCCCTCCCGCCGCGGCCTTCGCGGTGGCGGCCCCG
CCGTCGTACCCGGCGGCCTTCTCCGCCGCCGCGGCGCCCACCGAGGGCCACGACGGCGAC
TTCTACTGTCACTACAAGTCGCTCCGGCGCCACCACGAGTTCCTGGAGATCCAGGAGGAC
TACGTCAAGGACGAGCTCAGGAACCTCAGGCGCGAGGAGCTCCGCGGGGCCGAGGAGGTG
AAGCGGTGCCGGGCGACGCCGCTCGAGATCGGCCAGTTCATGGAGATGGTCGACGCCGAC
CACGGCATCGTGGCGCCGACCACCACCGGCGGCAGCTTCTACGTGCGGGTCCTCAGCACC
ATCGGCCGCGAGCTGCTCAAGCCCTCGGCGTCCGTCGCGCTGCACCGCCACTCCCACGCG
CTCGTCGACGTGTTGCCGCCCGAGGCCGACTCCAGCATCTCGCTGCTCGGCTCGTCGGAG
AAGCCCAACGTCACCTACAGTGATATTGGTGGATGTGACATTCAGAAGCAAGAAATCAGG
GAAGCTGTCGAGTTACCCTTGACACATCATGAGTTGTACAAACAGATTGGTATTGATCCA
CCAAGAGGTGTGCTTCTGTATGGTCCTCCAGGTACTGGCAAGACCATGCTTGCCAAAGCT
GTGGCACATCACACAACTGCTGCTTTTATCAGAGTAGTCGGTTCAGAGTTTGTGCAGAAG
TACTTGGGTGAGGGACCTCGGATGGTTCGAGATGTATTCCGTTTGGCTAAGGAGAATGCC
CCTGCAATCATATTTATTGACGAGGTTGATGCTATAGCCACTGCACGTTTTGATGCTCAG
ACAGGTGCTGACCGAGAAGTTCAGCGCATTCTGATGGAGCTACTTAATCAGATGGATGGA
TTTGATCAAACAGTGAATGTGAAGGTTATAATGGCAACTAATAGGGCAGATACTCTAGAT
CCTGCTTTGTTGCGTCCAGGTAGACTTGACAGGAAAATCGAGTTCCCTCTTCCTGATCGG
CGGCAGAAGAGGCTTGTGTTCCAAGTCTGCACTGCCAAGATGAATTTGAGTGATGAGGTT
GATTTGGAAGATTATGTTTGTAGACCGGATAAGATCAGTGCTGCTGATATTGCTGCAATA
TGCCAAGAAGCTGGCATGCATGCCGTCAGGAAAAACCGGTACGTGATCCTGCCCAAGGAC
TTTGAGAAGGGCTACCGGACCAATGTAAAGAAGCCCGAGACAGACTTCGACTTCTACAAG
TGA

Peptide Sequence

PEP ID

EER91182
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:12784396:12789912:1 gene:SORBI_3001G157800 transcript:EER91182 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSATAVAPTPPAAAFAVAAPPSYPAAFSAAAAPTEGHDGDFYCHYKSLRRHHEFLEIQED
YVKDELRNLRREELRGAEEVKRCRATPLEIGQFMEMVDADHGIVAPTTTGGSFYVRVLST
IGRELLKPSASVALHRHSHALVDVLPPEADSSISLLGSSEKPNVTYSDIGGCDIQKQEIR
EAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQK
YLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDG
FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEV
DLEDYVCRPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPETDFDFYK

Transcript Sequence

Transcript ID

EER91182
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:12784396:12789912:1 gene:SORBI_3001G157800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAGTTGGTGACGAACTACCCAATAAAATCCTACAGTAACTCTTTGTTCCCCTCCACCCTC
GCCTCGCTCTCTGCACTCCCGATACGAAATCCGTAGATACCACCGGCGGCGATCGCACGG
GCGGCGTCGGGAACTCGGGATACAGCAGAAACCCTAACCCGCCTCATCCTCGTGCGATGT
CGGCAACCGCCGTGGCCCCGACCCCTCCCGCCGCGGCCTTCGCGGTGGCGGCCCCGCCGT
CGTACCCGGCGGCCTTCTCCGCCGCCGCGGCGCCCACCGAGGGCCACGACGGCGACTTCT
ACTGTCACTACAAGTCGCTCCGGCGCCACCACGAGTTCCTGGAGATCCAGGAGGACTACG
TCAAGGACGAGCTCAGGAACCTCAGGCGCGAGGAGCTCCGCGGGGCCGAGGAGGTGAAGC
GGTGCCGGGCGACGCCGCTCGAGATCGGCCAGTTCATGGAGATGGTCGACGCCGACCACG
GCATCGTGGCGCCGACCACCACCGGCGGCAGCTTCTACGTGCGGGTCCTCAGCACCATCG
GCCGCGAGCTGCTCAAGCCCTCGGCGTCCGTCGCGCTGCACCGCCACTCCCACGCGCTCG
TCGACGTGTTGCCGCCCGAGGCCGACTCCAGCATCTCGCTGCTCGGCTCGTCGGAGAAGC
CCAACGTCACCTACAGTGATATTGGTGGATGTGACATTCAGAAGCAAGAAATCAGGGAAG
CTGTCGAGTTACCCTTGACACATCATGAGTTGTACAAACAGATTGGTATTGATCCACCAA
GAGGTGTGCTTCTGTATGGTCCTCCAGGTACTGGCAAGACCATGCTTGCCAAAGCTGTGG
CACATCACACAACTGCTGCTTTTATCAGAGTAGTCGGTTCAGAGTTTGTGCAGAAGTACT
TGGGTGAGGGACCTCGGATGGTTCGAGATGTATTCCGTTTGGCTAAGGAGAATGCCCCTG
CAATCATATTTATTGACGAGGTTGATGCTATAGCCACTGCACGTTTTGATGCTCAGACAG
GTGCTGACCGAGAAGTTCAGCGCATTCTGATGGAGCTACTTAATCAGATGGATGGATTTG
ATCAAACAGTGAATGTGAAGGTTATAATGGCAACTAATAGGGCAGATACTCTAGATCCTG
CTTTGTTGCGTCCAGGTAGACTTGACAGGAAAATCGAGTTCCCTCTTCCTGATCGGCGGC
AGAAGAGGCTTGTGTTCCAAGTCTGCACTGCCAAGATGAATTTGAGTGATGAGGTTGATT
TGGAAGATTATGTTTGTAGACCGGATAAGATCAGTGCTGCTGATATTGCTGCAATATGCC
AAGAAGCTGGCATGCATGCCGTCAGGAAAAACCGGTACGTGATCCTGCCCAAGGACTTTG
AGAAGGGCTACCGGACCAATGTAAAGAAGCCCGAGACAGACTTCGACTTCTACAAGTGAA
GAAAGCTTGTTGATGTTAAAATAAAATGCATGCGCTCTTGTCGATATACTAACAAACTGG
GACACATGCCATGTTGGATGTTAAGCGACAATGACTACAATTCAAACGGCATCATACCTT
GTGCTGTTTGCTAGTGTGACAAATGCACCTAACCGTAGGTTGCATGGATGTCATCTGTAC
TAAATTTGTACTAACGATTTTCTTGTAATTGAGCCTGCAACACTTTCCTCTCATTATTCT
GTCTGACAACCGACACAAGCCTTCGGCGTGTACGTGCGTGCATTTTTGTATTTTGATTGG
AAACAAATGATGTTTCGGATGCGTCTTGGTAGTTTTTGCTTCCAAAATAATTGTAATTCT
TTTTCAGGT