Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER91115
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:11595265:11599265:1 gene:SORBI_3001G144600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATCCCCTCTCCGTGCTCCGCGACTACGCCGCCCGCAACGAGCTGGACAAGATCATC
TTCTCCGGCGACGAGATCCACTTCGGCTCCGACTACACCTTCCCGGCCTCCACCCCCACC
GCCTTCGCATCCAAGCAGTCCGGCCGCCCCTACCCGCTCTCCGCCGCCGTCTTCCTGGCG
CAGCACCACGACCTCAAGCACACCGACTTCATCCAGGCCGCGCGCCTCCGCCGCATCCCG
CCCGTTTCCCTCCCCGACCGCAAGACCTTCCTCGACTTCCTCCGCTTCGGCCACAACTCG
CTCCCCTCCGCCGACCCGCTCCTCCCCTCCGCCTTCCAGCCGCAGGAGCCCCACCTCCAT
CCGCCCTCGCCGCCGCCCGAGGACCCCGCGGCCGCCGAGGAGGCCACCACGGGGAAGCAA
ATCCGCGCGCTCGAGCGGCCCTTCAAGGACCGCAACGCCATCCTCGACGCCCGCGGCCGC
GACTTCCTCGCCGTCTTCCAGGCCGCCGTGCGCCGCCAGGACGAGCAGCGCAAGGGCGGC
GGCAAGGACGCGGCGCCCTCTTCCCGCCCCGACTCTGGCTCCGCCGCTGCAGCCCTGGCC
AAGCCCAAGGTGCTGGACAGGTCCCTCGGCGACGGCGTCGTGCCCATCATCCTCGTGCCC
AGCGCCTCGCAGACGCTGATTACGATCTACAACGTCAAGGAGTTCCTCGAGGACGGGGTG
TTCGTGCCTAGCGAGGAGAGGATGCGGGCGACCAAGGGAGGGAAGCCAGAGAGCGTCACG
GTGCAGAAGAAGCTGATTCGTACGGAGAGAGCTGGCGGCGCTGGGGGCGCCGTCTCCTTC
GAGGTTAGGGACAAGCCGGCTTCGCTCAAGTCAGACGATTGGGGGCGGGTGGTGGCCGTG
TTTGTGCTTGGCAAGGAGTGGCAGTTCAAGGACTGGCCCTTCAAGGACCATGTAGAGATC
TTCAACAGAGTTATTGGTTTCTATGTGCGCTTCGAAGATGATAGTGTGGAGGCAGCCAAG
GTGGTGAAACAGTGGAATGTAAAAATCATATCTATAAGCAAAAATAAAAGGCATCAAGAC
AGAACAGCTGCTCTTGAAGTATGGGAGCGCTTGGAGGAATTTATGCGGGCACGCACATAA

Peptide Sequence

PEP ID

EER91115
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:11595265:11599265:1 gene:SORBI_3001G144600 transcript:EER91115 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDPLSVLRDYAARNELDKIIFSGDEIHFGSDYTFPASTPTAFASKQSGRPYPLSAAVFLA
QHHDLKHTDFIQAARLRRIPPVSLPDRKTFLDFLRFGHNSLPSADPLLPSAFQPQEPHLH
PPSPPPEDPAAAEEATTGKQIRALERPFKDRNAILDARGRDFLAVFQAAVRRQDEQRKGG
GKDAAPSSRPDSGSAAAALAKPKVLDRSLGDGVVPIILVPSASQTLITIYNVKEFLEDGV
FVPSEERMRATKGGKPESVTVQKKLIRTERAGGAGGAVSFEVRDKPASLKSDDWGRVVAV
FVLGKEWQFKDWPFKDHVEIFNRVIGFYVRFEDDSVEAAKVVKQWNVKIISISKNKRHQD
RTAALEVWERLEEFMRART

Transcript Sequence

Transcript ID

EER91115
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:11595265:11599265:1 gene:SORBI_3001G144600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACGCACACCGGCAAAACCCAAACCCAGGAGGCACACAGCGTCGCCGGCGGCGATGGATCC
CCTCTCCGTGCTCCGCGACTACGCCGCCCGCAACGAGCTGGACAAGATCATCTTCTCCGG
CGACGAGATCCACTTCGGCTCCGACTACACCTTCCCGGCCTCCACCCCCACCGCCTTCGC
ATCCAAGCAGTCCGGCCGCCCCTACCCGCTCTCCGCCGCCGTCTTCCTGGCGCAGCACCA
CGACCTCAAGCACACCGACTTCATCCAGGCCGCGCGCCTCCGCCGCATCCCGCCCGTTTC
CCTCCCCGACCGCAAGACCTTCCTCGACTTCCTCCGCTTCGGCCACAACTCGCTCCCCTC
CGCCGACCCGCTCCTCCCCTCCGCCTTCCAGCCGCAGGAGCCCCACCTCCATCCGCCCTC
GCCGCCGCCCGAGGACCCCGCGGCCGCCGAGGAGGCCACCACGGGGAAGCAAATCCGCGC
GCTCGAGCGGCCCTTCAAGGACCGCAACGCCATCCTCGACGCCCGCGGCCGCGACTTCCT
CGCCGTCTTCCAGGCCGCCGTGCGCCGCCAGGACGAGCAGCGCAAGGGCGGCGGCAAGGA
CGCGGCGCCCTCTTCCCGCCCCGACTCTGGCTCCGCCGCTGCAGCCCTGGCCAAGCCCAA
GGTGCTGGACAGGTCCCTCGGCGACGGCGTCGTGCCCATCATCCTCGTGCCCAGCGCCTC
GCAGACGCTGATTACGATCTACAACGTCAAGGAGTTCCTCGAGGACGGGGTGTTCGTGCC
TAGCGAGGAGAGGATGCGGGCGACCAAGGGAGGGAAGCCAGAGAGCGTCACGGTGCAGAA
GAAGCTGATTCGTACGGAGAGAGCTGGCGGCGCTGGGGGCGCCGTCTCCTTCGAGGTTAG
GGACAAGCCGGCTTCGCTCAAGTCAGACGATTGGGGGCGGGTGGTGGCCGTGTTTGTGCT
TGGCAAGGAGTGGCAGTTCAAGGACTGGCCCTTCAAGGACCATGTAGAGATCTTCAACAG
AGTTATTGGTTTCTATGTGCGCTTCGAAGATGATAGTGTGGAGGCAGCCAAGGTGGTGAA
ACAGTGGAATGTAAAAATCATATCTATAAGCAAAAATAAAAGGCATCAAGACAGAACAGC
TGCTCTTGAAGTATGGGAGCGCTTGGAGGAATTTATGCGGGCACGCACATAATTGTTGTG
CACTCATGTAAACCTTCTATTTTCACTTTTACTGAGTTCTTGTAAAATTACACAGCAAGT
TCTAACAGGATTGGATATCATGTTCTGTATGATTAAATTGTCTGCTCAGTGACCATAAGG
TAATAAGCGATACATTTGTATTCACTGAAATTTTATTGAGTCTATAGTACATTACTCTTT
AATAATCAGCTAATTTGGTAACATAGTCAAGGGTATACCTTTAGTTATGTGCACTTTCTG
TTGATAGTAATTGAACGAGCTAGTTTCATGAACTGGATAACTTTCTTATCTATTCCATCT
TTAAAGTGTTAGAATATGTGTCATGAATCAGTAAAATAGGGATTGTTAAATGTTATTATA
AAGTTATTTATTTGATTTTGAGCCTTGTTTGGCTTGTGGACAACAGCTCATGTCCATAAG
TGACTAAGTGCCAATTTATACTATTTTAGTGACAATCTATAACTATAAGGATTTGTTAAC
TGTGCAAATGTTACCCTTTTTGTTTTTGATTCACCTGTGATTGAATTACTTAGGTTTTGT
GCAAATTAAGTTACTTGCCAAATTTAGTAGCTAGTCAAATTATCCCCACTTTAATTCCAC
AATGACAATATGGAAGGTGCTCATAATAATTAACACTCCCTATCTCAAAAGAATATAAAA
CATAGACTTAGGGCGTGTTTGGTTAGCATCCTCAGGCGTTGGATTTCGATCGCCTGGGGC
TAGGATTGCTGCCTAGTCTGCGAGCTGCCTGCCAGGTCGCTATCCAGATTCCAAACAGGC
CCTTATTAAGTACTTCCTCCGTTCCAAATTATAAGTCATTCCGAATTTTCTAGGTACATA
GCTTTTGCTATATATCTAGATATCCACTGTCTAGATACATATGCAAAATTATGTTTCTAG
AAAAGCCAGAACAGCTTTTAATTTAAGGCGTGTTTTGAGTGGCCGAACACAGGCTCCTCC
GGCTCCTCTCTAATGCCTGACGGAGCTGGAGCCGCTAAGGAGCACACAGGAATGCACAGT
AGCCGCTGCCGTAGAGGCAGAGGAGTCGGAGCCGCTCAGGCAGGAGCCCTGCCAAAGACA
GCCTTAGAAAGGAGGGAGTGGCAGTTATTTGTCAAAGCATTGTAGTAGTAAGAATGAAAG
AAAAATATGGCATATATTTGGATGGAGGGAGTAAATGATTATTTGCTGATACCACTGGAC
TCTACAACTTATATCTTATTAAACTTTTTCTAATTGATAGTCTTTGGCTATGCATCCTTG
CTGAAGGATCCTTCACCTGTTCATTGTTAGGGCAGTATCCCTTCATATTTCTGTCAAATT
TTCTGAAACGTTTCTCATTATCTAATACTTGTCAGTGACATTTGCTTCTCAATGTTATTT
TCAGTGACTGTTAAACACCCAAATGTTATGTTGAGCTGGAGGCAGACTTTGTGCTTGTTG
ATTTACTGATCGGCAGAATGACTTTATTTTTCTTAAAGGGGAAGGATAAAAGACAACCAT
TTTCCTAGATTCAATCTCAATATTGGTCGTTGACCATAGATGGCAGAATGGAATGGCTGG
GAGCACATGAAGACTGCAATCTTTGTACGCTAGGATGTATTTGTAATGTTGTACTTGCAA
ACTGCTAACTTCTTATTTCTAGGCAAGTATATGAGATAATTTTGCAAGTTGCGCCTGAAA
ATATATTTTCTCTATGCTGGTCGCTGGCTGTCAATCTTTTCGTGCTCCTG