Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90948
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:8118218:8121198:1 gene:SORBI_3001G105900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGAGCATGATGATCGCCGACGAGAAGCCGCAGCCGCAGCTGCTGTCGAAGAAGGCC
ACCTGCAACAGCCACGGGCAGGACTCGTCCTACTTCCTGGGGTGGGAGGAGTACGAGAAG
AACCCGTACGACCCCGTCGCCAACCCCGGCGGCATCATCCAGATGGGCCTCGCCGAGAAC
CAGCTATCGTTCGACCTGCTGGAGGCGTGGCTGGAGGACAACCCGGACGCGCTCGGCCTC
CGCCGGGGAGGCGCCTCCGTCTTCCGCGAGCTCGCGCTCTTCCAGGACTACCACGGCATG
CCGGCCTTCAAGAATGCATTGGCGAGGTTCATGTCGGAGCAACGTGGGTACAGGGTGACC
TTCGACCCCAGCAACATCGTGCTCACCGCCGGCGCCACCTCGGCCAACGAGGCGCTCATG
TTCTGCCTCGCCGACCACGGAGACGCCTTTCTCATCCCCACGCCATACTACCCAGGGTTC
GACCGTGACCTCAAGTGGCGCACCGGCGCCGAGATCGTCCCCGTGCACTGCACGAGCGCC
AACGGCTTCCGGGTGACGCGCGCCGCGCTGGACGACGCGTACCGGCGCGCCCAGAAGCAG
CGGCTGCGCGTCAAGGGCGTGCTCATCACCAACCCTTCCAACCCGCTGGGCACCACGTCC
CCGCGCGCCGACCTGGAGATGCTCGTCGACTTCGTGGCCGCCAAGGGCATCCACCTGGTG
AGCGACGAGATATACTCCGGCACGGCCTTCGCCGAGCCCGGATTCGTGAGCGTCCTCGAG
GTGGTGGCCGCGCGCCGCCGGAACTCCACGGACGCCGACGGGCTGCTGTCGGAGCGCGTG
CACGTAGTGTACAGCCTGTCCAAGGACCTGGGCCTCCCGGGTTTCCGCGTGGGCGCCATC
TACTCCTCCAACGCCGGCGTGGTCTCCGCCGCCACCAAGATGTCGAGCTTCGGCCTGGTG
TCGTCCCAGACGCAGCACCTCCTGGCGTCGCTCCTGGGCGACAGGGACTTCACCCGTCGG
TACATCGCCGAGAACACGCGGCGGATCAAGGCGCGCCGCGACCAGCTGGCGGAAGGCCTG
GCGGCGATCGGCGGCGTCGAGTGCCTGGAGAGCAACGCGGGGCTCTTCTGCTGGGTCAAC
ATGCGGGGGCTGATGCGGACCCCGTCGTTCGAGGGCGAGATGGAGCTGTGGAAGAAGGTG
GTGTTCGAGGTCGGGCTCAACATCTCGCCGGGGTCCTCCTGCCACTGCCGCGAGCCCGGG
TGGTTCCGCGTCTGCTTCGCCAACATGTCCGCCAAGACGCTCGACGTCGCGCTCAACCGC
CTGGCAGCCTTCGCGGAGGCCGCCGCCGTGGAGGGCCGAGGCCGGGGCCCCGCCGCCGCC
GCCGCGGCGCGCCGCGTGCTCGGGCCGGCCAGGAGCATGAGCCTCCCGATCCGCTTCAGC
TGGGCCAACCGCCTCACCCCGGCCTCCGCCGCCGACCGGAAGGCCGAGCGGTAG

Peptide Sequence

PEP ID

EER90948
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:8118218:8121198:1 gene:SORBI_3001G105900 transcript:EER90948 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVSMMIADEKPQPQLLSKKATCNSHGQDSSYFLGWEEYEKNPYDPVANPGGIIQMGLAEN
QLSFDLLEAWLEDNPDALGLRRGGASVFRELALFQDYHGMPAFKNALARFMSEQRGYRVT
FDPSNIVLTAGATSANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCTSA
NGFRVTRAALDDAYRRAQKQRLRVKGVLITNPSNPLGTTSPRADLEMLVDFVAAKGIHLV
SDEIYSGTAFAEPGFVSVLEVVAARRRNSTDADGLLSERVHVVYSLSKDLGLPGFRVGAI
YSSNAGVVSAATKMSSFGLVSSQTQHLLASLLGDRDFTRRYIAENTRRIKARRDQLAEGL
AAIGGVECLESNAGLFCWVNMRGLMRTPSFEGEMELWKKVVFEVGLNISPGSSCHCREPG
WFRVCFANMSAKTLDVALNRLAAFAEAAAVEGRGRGPAAAAAARRVLGPARSMSLPIRFS
WANRLTPASAADRKAER

Transcript Sequence

Transcript ID

EER90948
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:8118218:8121198:1 gene:SORBI_3001G105900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCAGCTAGCTTCCCTCCTCTGTCTGGCTCTCCCTCCTCCCTTCTCCAACTGTCCCCCTCT
GTCTCTCGCTCGCTTGTTCGCTCACTCACCGCACACACGCTGCACGCACACTCACTGTGT
GTGTCTCGTCTGTGCCTGACGCCCCCCCAGTTTCAAAGAAACGCTTGCGCGCCAAAGCTA
AGTGACGTGGCAATATGGTGAGCATGATGATCGCCGACGAGAAGCCGCAGCCGCAGCTGC
TGTCGAAGAAGGCCACCTGCAACAGCCACGGGCAGGACTCGTCCTACTTCCTGGGGTGGG
AGGAGTACGAGAAGAACCCGTACGACCCCGTCGCCAACCCCGGCGGCATCATCCAGATGG
GCCTCGCCGAGAACCAGCTATCGTTCGACCTGCTGGAGGCGTGGCTGGAGGACAACCCGG
ACGCGCTCGGCCTCCGCCGGGGAGGCGCCTCCGTCTTCCGCGAGCTCGCGCTCTTCCAGG
ACTACCACGGCATGCCGGCCTTCAAGAATGCATTGGCGAGGTTCATGTCGGAGCAACGTG
GGTACAGGGTGACCTTCGACCCCAGCAACATCGTGCTCACCGCCGGCGCCACCTCGGCCA
ACGAGGCGCTCATGTTCTGCCTCGCCGACCACGGAGACGCCTTTCTCATCCCCACGCCAT
ACTACCCAGGGTTCGACCGTGACCTCAAGTGGCGCACCGGCGCCGAGATCGTCCCCGTGC
ACTGCACGAGCGCCAACGGCTTCCGGGTGACGCGCGCCGCGCTGGACGACGCGTACCGGC
GCGCCCAGAAGCAGCGGCTGCGCGTCAAGGGCGTGCTCATCACCAACCCTTCCAACCCGC
TGGGCACCACGTCCCCGCGCGCCGACCTGGAGATGCTCGTCGACTTCGTGGCCGCCAAGG
GCATCCACCTGGTGAGCGACGAGATATACTCCGGCACGGCCTTCGCCGAGCCCGGATTCG
TGAGCGTCCTCGAGGTGGTGGCCGCGCGCCGCCGGAACTCCACGGACGCCGACGGGCTGC
TGTCGGAGCGCGTGCACGTAGTGTACAGCCTGTCCAAGGACCTGGGCCTCCCGGGTTTCC
GCGTGGGCGCCATCTACTCCTCCAACGCCGGCGTGGTCTCCGCCGCCACCAAGATGTCGA
GCTTCGGCCTGGTGTCGTCCCAGACGCAGCACCTCCTGGCGTCGCTCCTGGGCGACAGGG
ACTTCACCCGTCGGTACATCGCCGAGAACACGCGGCGGATCAAGGCGCGCCGCGACCAGC
TGGCGGAAGGCCTGGCGGCGATCGGCGGCGTCGAGTGCCTGGAGAGCAACGCGGGGCTCT
TCTGCTGGGTCAACATGCGGGGGCTGATGCGGACCCCGTCGTTCGAGGGCGAGATGGAGC
TGTGGAAGAAGGTGGTGTTCGAGGTCGGGCTCAACATCTCGCCGGGGTCCTCCTGCCACT
GCCGCGAGCCCGGGTGGTTCCGCGTCTGCTTCGCCAACATGTCCGCCAAGACGCTCGACG
TCGCGCTCAACCGCCTGGCAGCCTTCGCGGAGGCCGCCGCCGTGGAGGGCCGAGGCCGGG
GCCCCGCCGCCGCCGCCGCGGCGCGCCGCGTGCTCGGGCCGGCCAGGAGCATGAGCCTCC
CGATCCGCTTCAGCTGGGCCAACCGCCTCACCCCGGCCTCCGCCGCCGACCGGAAGGCCG
AGCGGTAGCCGTGCATTGGCGACCGCACGTGCCACCATACCACTGCGTGCTCAGCTTTTT
CAGCTCACCGAGTGGTGTGGAGCAATGTTCATAAACCAACCACGGCCCAAGTATACTATG
ATGATACCGTACCACACGGCAGCAGCAGGAGCACCACAGCATGATTAGCAGTAGGCGATT
AGTAGTAATTAATCATCATTCCTTATTGGGTTCTTGTAATTCTGTGTGGGTGGGGGCCGT
ATATACCACGCCGCCATTTTTCCTCGGAGGCACCGGCGATAGGTGCCCGAGGGCCACTGT
TGTATTATTATTAGGTATAGGAGCAGGAGCGATCGATCTTCCAGCAGGCATCGCATCGTG
TATTTTTTGACTGGGAATTCCCGTGCGTGTCCGTCCGTCCAGGGGCTGGCACGGGGGTCT
CCCGGTTGTTTTGGGTGTACGACACGCAGTCACTCTGTACCATTGTTATTGTTGTTACAA
CGATTGTATTACTGTTGGATAAATAAATTTCATCTGAACATAAAAAAAAGTCAAACCGGG
AACCACTTGGACGACATCGTTCTCAACGCTGTAGTAGGACTGATAACGAGCCTCTAGATC
TATACGTACTGTGTTGACTTTACTACCGATCGATCCATCGATGTTGTCAGGATAAATCTA
CGTACTACTACCAGTACTCCTATCTGTATTTGGGGCTCCCATTATATTTGCATGGTCCAG
AGAGGTGACTTTGTGAGCTCATGTCATGTGCCCTGGCAAGCGCAGTGGTCCGTCCTGCTG
CTCCTACATAAACATAAGTACGCTGGTTGACTCGTCTATTTATCCTACACGCTGGCCGGA
GAGAACGAACATGGCACCACGAACTTTGAACTTGCTCGGACCTCGGAATACGATGCATGC
TCCGCCCACTGTTCTTCTTTTACCACGATTTTTTGGCACAGTTTGCATTGGAGGGTTCTC
TTCGTTTATAAGCAGTTAGGGGGCATCTG