Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90942
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:8034152:8036927:1 gene:SORBI_3001G104900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCTGCTTCTCTTGCGTCTTCTCTCTTGTGCAGCAGCAGTGCTTCTACCAGTAGA
AGCGCAGCCATGCCAAGAGTAATCAGGATCCCAATTTTCTCCAAGAACCAGTACAGACCG
CCTCTTCGGCCTCTTAGGAGAGTAGTTAGGCGATCATTGCAGCAGGAGCAAGAGCAGAGG
GCGTCCCCCGTCTCCGTGGCCTCCGGCGAGCAACAGGAGGAGGCGACGGCGTCGCATCAT
GTCGGAGGGGTGGACGAGGCCAAGGCGTCGGGTCATGTTGGAGAGGCAGACAAGGGAGGC
CAAGGAGAAGGCGACGGTGAGGAGAAGAGGAGCACCGACGAGCAGCAGGAGGTGGACTGG
AAGTCAGACGAGGAGTTCAAGAAGTTCATGGGCAATCCCTCCATCGAGGCCGCCATCAAG
TTGGAGAAGAAGCGCGCCGACAGGAAGCTCCGCGAGCTGGACCGCGAGCCCGACGCCAAC
CCCGTCGCCGGCCTGTTCCGGGGCTTGGCAAAGGACCAGCTGGCCCGGGAGAAGCAGAGG
CTGGAGCTGGCGGAGCAGACCTTCAAGGCACTCGACCTCAACAAGCTAAAGAGCTGTTTC
GGGTACGACACGTTCTTCACGGTGGACGTCCGGAGGTTCGGCGACGGCGGGATCTTCATC
GGGAACCTGCGTAAGCCCGTGGAGGAGGTGCGGCCGAAGCTGGAGAAGAAGATCTCCGAG
GCGGCCGGAACAGAGGTCACCCTGTGGTTCATGGAGGAGAAGAAGGACGACATCACAAAG
CAGGTCTGTATGGTTCAGCCCAAGGCAGAGATCGACCTCCAGCTCGAGATCACCAAGCTG
AGCACGCCGTGGGGATACCTCAGCGCCGTGGCGTTGGCGGTCACGACCTTCGGGACGATC
GCGCTCATGAGCGGCTTCTTCCTCAAGCCCGGCGCAACGTTCGACGACTACGTCTCTGAC
GTGCTTCCTCTGTTCGGCGGCTTCCTCACCATACTCGGCGTCTCTGAGATCGCGACGAGG
CTGACGGCGGCGAAGTACGGTGTGAAGCTGAGCCCGTCGTTCCTCGTGCCGTCCAACTGG
ACGGGGTGCCTCGGCGTGATGAACAACTACGAGTCGTTGCTGCCCAACAAGAAGGCCCTG
TTCGACATACCGGTCGCGCGCGCGGCCAGCGCGTACATCACGTCAGTGGTGCTGGCCGTC
TCGGCGTTCATCGCCGACGGCAGCTTCAACGGCGGCGAGAACGCCCTGTTCGTGCGGCCG
GAGTTCTTCTACAACAACCCGCTGCTGTCGTTCGTGCAGCTGGTGATCGGCCCCTACGCC
GACGAGCTCGGGAACGTGCTCCCGAACGCGGTGGAGGGCGTGGGCGTGCCCGTGGACCCG
CTGGCGTTCGCGGGGCTCCTGGGCATCGTGGTGACGTCGCTGAACCTGCTCCCGATCGGG
CGGCTGGAGGGCGGGCGGATCGCGCAGGCGCTGTTCGGGCGCGGCACGGCGGCGCTGCTG
TCGTTCGGCACCTCCGTCCTGCTGGGCGCGGGCGCCATCAGCGGCAGCGTGCTGTGCCTG
GCGTGGGGCCTCTTCGCCACCTTCATCCGCGGCGGGGAGGAGATCCCGGCGCAGGACGAG
ATCACGCCGCTCGGCAACGACCGCTTCGCGTGGGGGTTCGTGCTCGCCCTGGTCTGCCTC
CTCACGCTCTTCCCCAACGGCGGCGGCACCTACTCTGCCTCCTTCCTCGGCGACCCGTTC
TTCAGAGGCGGCATCTGA

Peptide Sequence

PEP ID

EER90942
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:8034152:8036927:1 gene:SORBI_3001G104900 transcript:EER90942 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASASLASSLLCSSSASTSRSAAMPRVIRIPIFSKNQYRPPLRPLRRVVRRSLQQEQEQR
ASPVSVASGEQQEEATASHHVGGVDEAKASGHVGEADKGGQGEGDGEEKRSTDEQQEVDW
KSDEEFKKFMGNPSIEAAIKLEKKRADRKLRELDREPDANPVAGLFRGLAKDQLAREKQR
LELAEQTFKALDLNKLKSCFGYDTFFTVDVRRFGDGGIFIGNLRKPVEEVRPKLEKKISE
AAGTEVTLWFMEEKKDDITKQVCMVQPKAEIDLQLEITKLSTPWGYLSAVALAVTTFGTI
ALMSGFFLKPGATFDDYVSDVLPLFGGFLTILGVSEIATRLTAAKYGVKLSPSFLVPSNW
TGCLGVMNNYESLLPNKKALFDIPVARAASAYITSVVLAVSAFIADGSFNGGENALFVRP
EFFYNNPLLSFVQLVIGPYADELGNVLPNAVEGVGVPVDPLAFAGLLGIVVTSLNLLPIG
RLEGGRIAQALFGRGTAALLSFGTSVLLGAGAISGSVLCLAWGLFATFIRGGEEIPAQDE
ITPLGNDRFAWGFVLALVCLLTLFPNGGGTYSASFLGDPFFRGGI

Transcript Sequence

Transcript ID

EER90942
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:8034152:8036927:1 gene:SORBI_3001G104900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGGGCCTCACCTCCGTCGTCGCCACTCAGCTACTACACGCAGCACAGATCAGCCACCTCC
GACCGTCGCATTCTTCACGAGTCCTCCGGCCCAGCGCGCGCCTTCTCAAACTTTCTAGAA
CCCCCACCTTCCTTCTTCCCTCCGCTCCCACCGCTTCATTCCAATTTCTAAACCTTTTTA
AGCTCTCCCATGGGGTCTGTCAAGCTCATAGCTCATAGCAAAACAATACAAGTAGAACAA
GCACAGAACTGTCAAGCTCCGCAGGCTGCAGCTCGTCCCCAATGGCGTCTGCTTCTCTTG
CGTCTTCTCTCTTGTGCAGCAGCAGTGCTTCTACCAGTAGAAGCGCAGCCATGCCAAGAG
TAATCAGGATCCCAATTTTCTCCAAGAACCAGTACAGACCGCCTCTTCGGCCTCTTAGGA
GAGTAGTTAGGCGATCATTGCAGCAGGAGCAAGAGCAGAGGGCGTCCCCCGTCTCCGTGG
CCTCCGGCGAGCAACAGGAGGAGGCGACGGCGTCGCATCATGTCGGAGGGGTGGACGAGG
CCAAGGCGTCGGGTCATGTTGGAGAGGCAGACAAGGGAGGCCAAGGAGAAGGCGACGGTG
AGGAGAAGAGGAGCACCGACGAGCAGCAGGAGGTGGACTGGAAGTCAGACGAGGAGTTCA
AGAAGTTCATGGGCAATCCCTCCATCGAGGCCGCCATCAAGTTGGAGAAGAAGCGCGCCG
ACAGGAAGCTCCGCGAGCTGGACCGCGAGCCCGACGCCAACCCCGTCGCCGGCCTGTTCC
GGGGCTTGGCAAAGGACCAGCTGGCCCGGGAGAAGCAGAGGCTGGAGCTGGCGGAGCAGA
CCTTCAAGGCACTCGACCTCAACAAGCTAAAGAGCTGTTTCGGGTACGACACGTTCTTCA
CGGTGGACGTCCGGAGGTTCGGCGACGGCGGGATCTTCATCGGGAACCTGCGTAAGCCCG
TGGAGGAGGTGCGGCCGAAGCTGGAGAAGAAGATCTCCGAGGCGGCCGGAACAGAGGTCA
CCCTGTGGTTCATGGAGGAGAAGAAGGACGACATCACAAAGCAGGTCTGTATGGTTCAGC
CCAAGGCAGAGATCGACCTCCAGCTCGAGATCACCAAGCTGAGCACGCCGTGGGGATACC
TCAGCGCCGTGGCGTTGGCGGTCACGACCTTCGGGACGATCGCGCTCATGAGCGGCTTCT
TCCTCAAGCCCGGCGCAACGTTCGACGACTACGTCTCTGACGTGCTTCCTCTGTTCGGCG
GCTTCCTCACCATACTCGGCGTCTCTGAGATCGCGACGAGGCTGACGGCGGCGAAGTACG
GTGTGAAGCTGAGCCCGTCGTTCCTCGTGCCGTCCAACTGGACGGGGTGCCTCGGCGTGA
TGAACAACTACGAGTCGTTGCTGCCCAACAAGAAGGCCCTGTTCGACATACCGGTCGCGC
GCGCGGCCAGCGCGTACATCACGTCAGTGGTGCTGGCCGTCTCGGCGTTCATCGCCGACG
GCAGCTTCAACGGCGGCGAGAACGCCCTGTTCGTGCGGCCGGAGTTCTTCTACAACAACC
CGCTGCTGTCGTTCGTGCAGCTGGTGATCGGCCCCTACGCCGACGAGCTCGGGAACGTGC
TCCCGAACGCGGTGGAGGGCGTGGGCGTGCCCGTGGACCCGCTGGCGTTCGCGGGGCTCC
TGGGCATCGTGGTGACGTCGCTGAACCTGCTCCCGATCGGGCGGCTGGAGGGCGGGCGGA
TCGCGCAGGCGCTGTTCGGGCGCGGCACGGCGGCGCTGCTGTCGTTCGGCACCTCCGTCC
TGCTGGGCGCGGGCGCCATCAGCGGCAGCGTGCTGTGCCTGGCGTGGGGCCTCTTCGCCA
CCTTCATCCGCGGCGGGGAGGAGATCCCGGCGCAGGACGAGATCACGCCGCTCGGCAACG
ACCGCTTCGCGTGGGGGTTCGTGCTCGCCCTGGTCTGCCTCCTCACGCTCTTCCCCAACG
GCGGCGGCACCTACTCTGCCTCCTTCCTCGGCGACCCGTTCTTCAGAGGCGGCATCTGAA
TTCATCTCCTTCCGTGCAGTCTGCAGTGTGCGTGTATTTATAAATTTATTAGTACGCGCT
CCACTAGGCTAATAGCCACTCTACTAACCACTCACCACTCCGCAGTTTCCACGGTTAAAA
TCTTTCTTGCGAGGTAGGAGTAGATCTCTTCACGTATTGTGTAATAAGGAGCATTATATA
AATAAATAGTTAGCTGGTTTGGCACATCTCAATCTTCAAGAAGACAGCCAAATATATATA
AAAAAACCATTAACATTTATCATTAGATTAGTTTGATAAAAGAATCTAATCTTACAGGAG
TGTTTAGTTATTTGCCGATAATTTTTTATGTGGCCAAATCTATTAGAACTTTTTTTTTTA
TAAATGTGACTCCGTAGGCAGCTATAGCGCAAATCTTAAAGCACA